| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015N08 | Sequence | 528 | 002038 (6) | ref|XP_011081024.1| | 3e-39 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum | 678 | 004223 (7) | ref|XP_011081024.1| | 3e-77 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum |
| JMFF025A02 | Sequence | 537 | 002038 (6) | ref|XP_011081024.1| | 5e-35 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum | 754 | 004223 (7) | ref|XP_011081022.1| | 5e-106 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1 [Sesamum |
| JMSF001F16 | Sequence | 242 | 002038 (6) | 657 | 004223 (7) | ref|XP_011081024.1| | 6e-97 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum | |||
| JMSF011O17 | Sequence | 298 | 002038 (6) | ref|XP_011081024.1| | 5e-08 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum | 659 | 004223 (7) | ref|XP_011081024.1| | 6e-87 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum |
| JMSF014G18 | Sequence | 630 | 004223 (7) | ref|XP_011081022.1| | 1e-47 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1 [Sesamum | |||||
| JMSF014H18 | Sequence | 470 | 002038 (6) | ref|XP_011081024.1| | 3e-24 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum | 805 | 004223 (7) | ref|XP_011081022.1| | 6e-100 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1 [Sesamum |
| JMSF035M01 | Sequence | 630 | 002038 (6) | ref|XP_011081024.1| | 2e-41 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X2 [Sesamum | 687 | 004223 (7) | ref|XP_011081022.1| | 9e-98 | PREDICTED: probable NOT transcription complex subunit VIP2 isoform X1 [Sesamum |
This contig is upended
. : . : . : . : . : . :
rJMFF025A02+ GCTCAA
____________________________________________________________
consensus GCTCAA
. : . : . : . : . : . :
rJMSF035M01+ ACAGGCATCACAGGCTGCTGATCGAT
rJMSF001F16+ T
rJMSF011O17+ T
rJMFF025A02+ TCAGCCCATTTAGAGATCAAGATCTGAAACCCCTACAGGCATCACAGGCTGCTGATCGAT
rJMSF014H18+ ACAGGCATCACAGGCTGCTGATCGAT
____________________________________________________________
consensus TCAGCCCATTTAGAGATCAAGATCTGAAACCCCTACAGGCATCACAGGCTGCTGATCGAT
. : . : . : . : . : . :
rJMSF035M01+ TTGGGAATGTTTGGTTTACTAAATGTTATCAAAATGACAAATCCTGCTTTGAGTACACTT
rJMSF001F16+ TT-GGAATGTTTGGTTTACTAAATGTTATCAAAATGACAAATCCTGCTTTGAGTACACTT
rJMSF011O17+ TT-GGAATGTTNGGTTTACTAAATGTTATCAAAATGACANATCCTGCTNTGAGTACACTT
rJMFF025A02+ TT-GGAATGTTTGGTTTACTAAATGTTATCAAAATGACAAATCCTGCTTTGAGTACACTT
rJMSF014H18+ TT-GGAATGTTTGGTTTACTAAATGTTATCAAAATGACAAATCCTGCTTTGAGTACACTT
____________________________________________________________
consensus TT-GGAATGTTTGGTTTACTAAATGTTATCAAAATGACAAATCCTGCTTTGAGTACACTT
. : . : . : . : . : . :
rJMSF035M01+ GCTCTTGGTGTTGATCTGACTTCACTTGGTCTAAACTTGAACTCAGCAGAAAATCTTCAT
rJMSF001F16+ GCTCTTGGTGTTGATCTGACTTCACNTGGTCTAAACTTGAACTCAGCAGAAAATCTTCAT
rJMSF011O17+ GCTCNNGGTGTTGATCTGACTTCACTNGGTCTNAACTTGAACTCAGCNGAAAATCNTCAT
rJMFF025A02+ GCTCTTGGTGTTGATCTGACTTCACTTGGTCTAAACTTGAACTCAGCAGAAAATCTTCAT
rJMFF015N08+ AACTCAGCAGAAAATCTTCAT
rJMSF014H18+ GCTCTTGGTGTTGATCTGACTTCACTTGGTCTAAACTTGAACTCAGCAGAAAATCTTCAT
____________________________________________________________
consensus GCTCTTGGTGTTGATCTGACTTCACTTGGTCTAAACTTGAACTCAGCAGAAAATCTTCAT
. : . : . : . : . : . :
rJMSF035M01+ AAGACTTTTGCCTCTCCTTGGTCTGATGAACCTGCCAAAGGGGAGCCTGAATACACCATC
rJMSF001F16+ AAGACTTTTGCCTCTCCTTGGTCTGATGAACCTGCCAAAGGGGAGCCTGAATACACCATC
rJMSF011O17+ AAGACTTTCGCCTCTCCTNGGTCNGATGAACCTNCCAAAGGGGAGCCTGAATACACCATC
rJMFF025A02+ AAGACTTTTGCCTCTCCTTGGTCTGATGAACCTGCCAAAGGGGAGCCTGAATACACCATC
rJMFF015N08+ AAGACTTTTGCCTCTCCTTGGTCTGATGAACCTGCCAAAGGGGAGCCTGAATACACCATC
rJMSF014G18+ TGATGAACCTGCCAAAGGGGAGCCTGAATACACCATC
rJMSF014H18+ AAGACTTTTGCCTCTCCTTGGTCTGATGAACCTGCCAAAGGGGAGCCTGAATACACCATC
____________________________________________________________
consensus AAGACTTTTGCCTCTCCTTGGTCTGATGAACCTGCCAAAGGGGAGCCTGAATACACCATC
. : . : . : . : . : . :
rJMSF035M01+ CCAGAATGTTATAATGCTAAACAATCTCCTGTCCTAAAACAAAGTTACTTCTCAAAATTT
rJMSF001F16+ CCAGAATGTTATAATTCTAAACAATCTCCTGTCCTAAAACAAAGTTACTTCTCAAAATTT
rJMSF011O17+ CCAGAATGTTATAATGCTAAACAATCTCCTGTCCTAAAACAAAGTTACTTCTCAAAATTT
rJMFF025A02+ CCAGAATGTTATAATGCTAAACAATCTCCTGTCCTAAAACAAAGTTACTTCTCAAAATTT
rJMFF015N08+ CCAGAATGTTATAATGCTAAACAATCTCCTGTCCTAAAACAAAGTTACTTCTCAAAATTT
rJMSF014G18+ CCAGAATGTTATAATGCTAAACAATCTCCTGTCCTAAAACAAAGTTACTTCTCAAAATCT
rJMSF014H18+ CCAGAATGTTATAATGCTAAACAATCTCCTGTCCTAAAACAAAGTTACTTCTCAAAATTT
____________________________________________________________
consensus CCAGAATGTTATAATGCTAAACAATCTCCTGTCCTAAAACAAAGTTACTTCTCAAAATTT
. : . : . : . : . : . :
rJMSF035M01+ AGGCCAGAGACATTATTTTATATCTTCTACAGCATGCCTAAGGAGGAGGCACAACTGTAT
rJMSF001F16+ AGGCCAGAGACATTATTTTATATCTTCTACAGCATGCCTAAGGAGGAGGCACAACTGTAT
rJMSF011O17+ AGGCCAGAGACATTATTTTATATCTTCTACAGCATGCCTAAGGAGGAGGCACAACNGTAT
rJMFF025A02+ AGGCCAGAGACATTATTTTATATCTTCTACAGCATGCCTAAGGAGGAGGCACAACTGTAT
rJMFF015N08+ AGGCCAGAGACATTATTTTATATCTTCTACAGCATGCCTAAGGAGGAGGCACAACTGTAT
rJMSF014G18+ AGGCCAGAGACATTATTNTANATCTTCTACAGCATGCCTAAGGAGGAGGCNCANCTGTAN
rJMSF014H18+ AGGCCAGAGACATTATTTTATATCTTCTACAGCATGCCTAAGGAGGAGGCACAACTGTAT
____________________________________________________________
consensus AGGCCAGAGACATTATTTTATATCTTCTACAGCATGCCTAAGGAGGAGGCACAACTGTAT
. : . : . : . : . : . :
rJMSF035M01+ GCGGCAAATGAGTTGCATGTTAGGGGGTGGTTCTATCACAGAGAGCTCCGCCTATGGTTC
rJMSF001F16+ GCGGCAAATGAGTTGCATGTTAGGGGGTGGTTCTATCACAGAGAGCTCCGCCTATGGTTC
rJMSF011O17+ GCGGCAAATGAGTTGCATGTTAGGGGGTGGTTCTATCACAGAGAGCTCCGCNTATGGTTC
rJMFF025A02+ GCGGCAAATGAGTTGCATGTTAGGGGGTGGTTCTATCACAGAGAGCTCCGCCTATGGTTC
rJMFF015N08+ GCGGCAAATGAGTTGCATGTTAGGGGGTGGTTCTATCACAGAGAGCTCCGCCTATGGTTC
rJMSF014G18+ GCGGCAAATGAGTTGCATGTTAGGGGGNGGTTCTATCACAGAGAGCTCCGCCTATGGTTC
rJMSF014H18+ GCGGCAAATGAGTTGCATGTTAGGGGGTGGTTCTATCACAGAGAGCTCCGCCTATGGTTC
____________________________________________________________
consensus GCGGCAAATGAGTTGCATGTTAGGGGGTGGTTCTATCACAGAGAGCTCCGCCTATGGTTC
. : . : . : . : . : . :
rJMSF035M01+ ACAAGGGTCACAAATATTGAGCCTCTTGTCAAGACTGCTACTTACGAGAGAGGCTGTTAC
rJMSF001F16+ ACAAGGGTCACAAATATTGAGCCTCTTGTCAAGACTGCTACTTACGAGAGAGGCTGTTAC
rJMSF011O17+ ACAAGGGTCACAAATATTGAGCCTCTTGTCAAGACTGCTACTTACGAGAGAGGCTGTTAC
rJMFF025A02+ ACAAGGGTCACAAATATTGAGCCTCTTGTCAAGACTGCTACTTACGAGAGAGGCTGTTAC
rJMFF015N08+ ACAAGGGTCACAAATATTGAGCCTCTTGTCAAGACTGCTACTTACGAGAGAGGCTGTTAC
rJMSF014G18+ ACAAGGGTCACAAATANTGANCCTCTTGTCAAGACTGCTACTTACGAGAGAGGCTGTTAN
rJMSF014H18+ ACAAGGGTCACAAATATTGAGCCTCTTGTCAAGACTGCTACTTACGAGAGAGGCTGTTAC
____________________________________________________________
consensus ACAAGGGTCACAAATATTGAGCCTCTTGTCAAGACTGCTACTTACGAGAGAGGCTGTTAC
. : . : . : . : . : . :
rJMSF035M01+ TTCTGCTTTGACCCCAACACTTGGGAGGTCGTGAGAAAGGATAACTTTGTTCTGCAGTAC
rJMSF001F16+ TTCTGCTTTGACCCCAACACTTGGGAGGTCGTGAGAAAGGATAACTTTGTTCTGCAGTAC
rJMSF011O17+ NTCTGCTNTGACCCCAACACTTGGGAGGTCGTGAGAAAGGATAACTTTGTTCTGCAGTAC
rJMFF025A02+ TTCTGCTTTGACCCCAACACTTGGGAGGTCGTGAGAAAGGATAACTTTGTTCTGCAGTAC
rJMFF015N08+ TTCTGCTTTGACCCCAACACTTGGGAGGTCGTGAGAAAGGATAACTTTGTTCTGCAGTAC
rJMSF014G18+ TTCNGCTTNGACCCCAACACNTGGGAGGTNGTGAGAAAGGATAACTTTGTTCTGCAGTAC
rJMSF014H18+ TTCTGCTTTGACCCCAACACTTGGGAGGTCGTGAGAAAGGATAACTTTGTTCTGCAGTAC
____________________________________________________________
consensus TTCTGCTTTGACCCCAACACTTGGGAGGTCGTGAGAAAGGATAACTTTGTTCTGCAGTAC
. : . : . : . : . : . :
rJMSF035M01+ GAAATGATTGAAAAGGTCCCAGTGCTTCCTTAGAAGTTACCAGCTGCCCAAGATGGTTCC
rJMSF001F16+ GAAATGATTGAAAAGGTCCCAGTGCTTCCTTAGAAGTTACCAGCTGCCCAAGATGGTTCC
rJMSF011O17+ GAAANGATTGAAAAGGTCCCAGNGCTTCCTTAGAAGTTACCAGCTGCCCAAGATGGTTCC
rJMFF025A02+ GAAATGATTGAAAAGGTCCCAGTGCTTCCTTAGAAGTTACCAGCTGCCCAAGATGGTTCC
rJMFF015N08+ GAAATGATTGAAAAGGTCCCAGTGCTTCCTTAGAAGTTACCAGCTGCCCAAGATGGTTCC
rJMSF014G18+ GAAATGATTGAAAAGGTCCCAGTGCTTCCTTAGAAGTTACCAGCTGCCCAAGATGGTTCC
rJMSF014H18+ GAAATGATTGAAAAGGTCCCAGTGCTTCCTTAGAAGTTACCAGCTGCCCAAGATGGTTCC
____________________________________________________________
consensus GAAATGATTGAAAAGGTCCCAGTGCTTCCTTAGAAGTTACCAGCTGCCCAAGATGGTTCC
. : . : . : . : . : . :
rJMSF035M01+ ATGTGCATTTTCCATTGCTATCTTCAGATTTCTTCTGAATAGAACTTTCTTTATAAATTA
rJMSF001F16+ ATGTGCATTTTCCATTGCTATCTTCAGATTTCTTCTGAATAGAACTTTCTTTATAAATTA
rJMSF011O17+ ATGTGCATTTTCCATTGCTATCTTCAGANTTCTTCTGAATAGAACTTTCTTTATAAANTA
rJMFF025A02+ ATGTGCATTTTCCATTGCTATCTTCAGATTTCTTCTGAATAGAACTTTCTTTATAAATTA
rJMFF015N08+ ATGTGCATTTTCCATTGCTATCTTCAGATTTCTTCTGAATAGAACTTTCTTTATAAATTA
rJMSF014G18+ ATGNGCATTTTCCATTGCTATNTTCAGATTTCTTCTGAATAGANCTTTCTTTATAAATTN
rJMSF014H18+ ATGTGCATTTTCCATTGCTATCTTCAGATTTCTTCTGAATAGAACTTTCTTTATAAATTA
____________________________________________________________
consensus ATGTGCATTTTCCATTGCTATCTTCAGATTTCTTCTGAATAGAACTTTCTTTATAAATTA
. : . : . : . : . : . :
rJMSF035M01+ GAATAATAGAGATGTAATGTTATTGTAAAAGATTCTTGATTTCTCAGTCATCACCTT
rJMSF001F16+ GAATAATAGAGATGTAATGTTATTGTAAAAGATTCTTGATTTCTCAGTCATCACCTT
rJMSF011O17+ GAATAATAGAGATGTAATGTTATTGTAAAAGATTCTTGATTTCTCAGTCATCACCTT
rJMFF025A02+ GAATAATAGAGATGTAATGTTATTGTAAAAGATTCTTGATTTCTCAGTCATCACCTTTAA
rJMFF015N08+ GAATAATAGAGATGTAATGTTATTGTAAAAGATTCTTGATTTCTCAGTCATCACCTTTAA
rJMSF014G18+ GAATAANAGAGATGNAATGTTATNGTAAAAGATTCTTGATTTATCAGTCATCACCTTNAA
rJMSF014H18+ GAATAATAGAGATGTAATGTTATTGTAAAAGATTCTTGATTTCTCAGTCATCACCTTTAA
____________________________________________________________
consensus GAATAATAGAGATGTAATGTTATTGTAAAAGATTCTTGATTTCTCAGTCATCACCTTTAA
. : . : . : . : . : . :
rJMFF025A02+ TTTAGGCCCACTGGG
rJMFF015N08+ TTTAGGCCCACTGGGATTTGTTCCCAGGAGTTGGCGCCTTTGGCCTAGTTCTATGCTTTG
rJMSF014G18+ TTTAGGCCCACTGGGNTTTGTNCCCAGGAGTCGGCGCCTTTGGCCTAGTTCTATGCTTTG
rJMSF014H18+ TTTAGGCCCACTGGGATTTGTTCCCAGGAGTTGGCGCCTTTGGCCTAGTTCTATGCTTTG
____________________________________________________________
consensus TTTAGGCCCACTGGGATTTGTTCCCAGGAGTTGGCGCCTTTGGCCTAGTTCTATGCTTTG
. : . : . : . : . : . :
rJMFF015N08+ TTTTACAGTCTTTAGGGTTAAAATAGTAGTCAATTTCTTTT
rJMSF014G18+ TCNTACAGTCTTCAGGGTTNAAATAGNAGTCAATNTCTTTT
rJMSF014H18+ TTTTACAGTCTTTAGGGTTAAAATAGTAGTCAATTTCTTTTTCAATTGCGATACAATAAA
____________________________________________________________
consensus TTTTACAGTCTTTAGGGTTAAAATAGTAGTCAATTTCTTTTTCAATTGCGATACAATAAA