Contig 004222:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014G10Sequence557006449 (3)ref|XP_009624585.1|6e-26PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [773004222 (3)gb|AHF22108.1|1e-87bifunctional GTP cyclohydrolase II/34-dihydroxy-2-butanone 4-phosphate synthase
JMSF050F15Sequence698006449 (3)ref|XP_009624585.1|4e-69PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [741004222 (3)dbj|BAA08113.1|2e-113GTP cyclohydrolase II [Arabidopsis thaliana]
JMSF050O01Sequence586006449 (3)ref|XP_009624585.1|2e-43PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [771004222 (3)gb|AHF22108.1|3e-84bifunctional GTP cyclohydrolase II/34-dihydroxy-2-butanone 4-phosphate synthase

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF050F15+ GNTACAGATCAGTCTNGGATGGGATCGAACACATTGCA
                      ____________________________________________________________
consensus GNTACAGATCAGTCTNGGATGGGATCGAACACATTGCA
 
. : . : . : . : . : . :
rJMSF050F15+ ATGGTTAAGGGCGAGATTGGGGATGGGCAAGATATTCTTGTTCGAGTGCACTCGGAGTGC
                      ____________________________________________________________
consensus ATGGTTAAGGGCGAGATTGGGGATGGGCAAGATATTCTTGTTCGAGTGCACTCGGAGTGC
 
. : . : . : . : . : . :
rJMSF050F15+ CTTACGGGGGACATATTTGGTTCAGCAAGATGTGATTGCGGGAGCCAATTGGCACTTGCA
rJMSF050O01+ TTGGTTCAGCAAGATGTGATTGCGGGAGCCAATTGNCACCTGCA
rJMSF014G10+ TTGGTTCAGCAAGATGTGATTGCGGGAGCCAATTGGCACTTGCA
                      ____________________________________________________________
consensus CTTACGGGGGACATATTTGGTTCAGCAAGATGTGATTGCGGGAGCCAATTGGCACTTGCA
 
. : . : . : . : . : . :
rJMSF050F15+ ATGCAACAAATCGAGGCGGCTGGCAGGGGCGTTTTGGTCTACCTTCGTGGCCACGAAGGA
rJMSF050O01+ ATGCAACAAATCGAGGCGGCTGGCAGGGGCGTTTTGGTCTACCTTCGTGGCCACGAAGGA
rJMSF014G10+ ATGCAACAAATCGAGGCGGCTGGCAGGGGCGTTTTGGTCTACCTTCGTGGCCACGAAGGA
                      ____________________________________________________________
consensus ATGCAACAAATCGAGGCGGCTGGCAGGGGCGTTTTGGTCTACCTTCGTGGCCACGAAGGA
 
. : . : . : . : . : . :
rJMSF050F15+ AGAGGAATCGGTTTGGGCCACAAACTCCGGGCCTACACTNTACAGGATGCTGGGCGTGAC
rJMSF050O01+ AGAGGAATCGGTTTGGGCCACAAACTCCGGGCCTACACTCTACAGGATGCTGGGCGTGAC
rJMSF014G10+ AGAGGAATCGGTTTGGGCCACAAACTCCGGGCCTACACTCTACAGGATGCTGGGCGTGAC
                      ____________________________________________________________
consensus AGAGGAATCGGTTTGGGCCACAAACTCCGGGCCTACACTCTACAGGATGCTGGGCGTGAC
 
. : . : . : . : . : . :
rJMSF050F15+ ACTGTTGAAGCAAACGAGGAACTCGGTTTACCAGTTGATTCAAGAGAGTATGGAATCGGT
rJMSF050O01+ ACTGTTGAAGCAAACGAGGAACTCGGTTTACCAGTTGATTCAAGAGAGTATGGAATCGGT
rJMSF014G10+ ACTGTTGAAGCAAACGAGGAACTCGGTTTACCAGTTGATTCAAGAGAGTATGGAATCGGT
                      ____________________________________________________________
consensus ACTGTTGAAGCAAACGAGGAACTCGGTTTACCAGTTGATTCAAGAGAGTATGGAATCGGT
 
. : . : . : . : . : . :
rJMSF050F15+ GCACAGATACTAAGGGATCTTGGCGTTCGAACTATGAAGCTGATGACAAATAACCCCGCA
rJMSF050O01+ GCACAGATACTAAGGGATCTTGGCGTTCGAACTATGAAGCTGATGACAAATAACCCCGCA
rJMSF014G10+ GCACAGATACTAAGGGATCTTGGCGTTCGAACTATGAAGCTGATGACAAATAACCCCGCA
                      ____________________________________________________________
consensus GCACAGATACTAAGGGATCTTGGCGTTCGAACTATGAAGCTGATGACAAATAACCCCGCA
 
. : . : . : . : . : . :
rJMSF050F15+ AAATACGTTGGGCTCAAGGGCTACGGTTTGTCAGTCGCGGGAAGGGTACCCCTCTTAACT
rJMSF050O01+ AAATACGTTGGGCTCAAGGGCTACGGTTTGTCAGTCGCGGGAAGGGTACCCCTCTTAACT
rJMSF014G10+ AAATACGTTGGGCTCAAGGGCTACGGTTTGTCAGTCGCGGGAAGGGTACCCCTCTTAACT
                      ____________________________________________________________
consensus AAATACGTTGGGCTCAAGGGCTACGGTTTGTCAGTCGCGGGAAGGGTACCCCTCTTAACT
 
. : . : . : . : . : . :
rJMSF050F15+ CCCATCACAAAAGACAACAAAAGATACCTGGAAACGAAGCGCGCCAAAATGGGGCACATA
rJMSF050O01+ CCCATCACAAAAGACAACAAAAGATACCTGGAAACGAAGCGCGCCAAAATGGGGCACATA
rJMSF014G10+ CCCATCACAAAAGACAACAAAAGATACCTGGAAACGAAGCGCGCCAAAATGGGGCACATA
                      ____________________________________________________________
consensus CCCATCACAAAAGACAACAAAAGATACCTGGAAACGAAGCGCGCCAAAATGGGGCACATA
 
. : . : . : . : . : . :
rJMSF050F15+ TATGGCTTGAACTTCAAAGAGCTTATACACAACCCAAGCGAAACCGACAGCAAAACCAAC
rJMSF050O01+ TATGGCTTGAACTTCAAAGAGCTTATACACAACCCAAGCGAAACCGACAGCAAAACCAAC
rJMSF014G10+ TATGGCTTGAACTTCAAAGAGCTTATACACAACCCAAGCGAAACCGACAGCAAAACCAAC
                      ____________________________________________________________
consensus TATGGCTTGAACTTCAAAGAGCTTATACACAACCCAAGCGAAACCGACAGCAAAACCAAC
 
. : . : . : . : . : . :
rJMSF050F15+ ATCAAGAATGCGCCCAATGTTCCAGATTCATAAGTTTCAGTCTAACAATAATTGTGAAAA
rJMSF050O01+ ATCAAGAATGCGCCCAATGTTCCAGATTCATAAGTTTCAGTCTAACAATAATTGTGAAAA
rJMSF014G10+ ATCAAGAATGCGCCCAATGTTCCAGATTCATAAGTTTCAGTCTAACAATAATTGTGAAAA
                      ____________________________________________________________
consensus ATCAAGAATGCGCCCAATGTTCCAGATTCATAAGTTTCAGTCTAACAATAATTGTGAAAA
 
. : . : . : . : . : . :
rJMSF050F15+ CTGAAATGTTTTTGCAAGGATGTTACTGACATTCTTGGGATTTTAACCTNGATTGATTTA
rJMSF050O01+ CTGAAATGTTTTTGCAAGGATGTTACTGACATTCTTGGGATTTTAACCTAGATTGATTTA
rJMSF014G10+ CTGAAATGTTTTTGCAAGGATGTTACTGACATTCTTGGGATTTTAACCTAGATTGATTTA
                      ____________________________________________________________
consensus CTGAAATGTTTTTGCAAGGATGTTACTGACATTCTTGGGATTTTAACCTAGATTGATTTA
 
. : . : . : . : . : . :
rJMSF050F15+ TTCATATTGTTTNTGGATCAGAGATT
rJMSF050O01+ TTCATATTGTTTTTGGATCAGAGATTCTTGTGATTTTGAATGTGGTAATATATGGAAGTC
rJMSF014G10+ TTCATATTGTTTTTGGATCAGAGATTCTTGTGATTTTGAATGTGGTAATATATGGAAGTC
                      ____________________________________________________________
consensus TTCATATTGTTTTTGGATCAGAGATTCTTGTGATTTTGAATGTGGTAATATATGGAAGTC
 
. : . : . : . : . : . :
rJMSF050O01+ TCAAGATTTAGTTAGTTTAGTTGGGCAATGCAAATTGCTAATATGAATAGGGATTGTTAA
rJMSF014G10+ TCAAGATTTAGTTAGTTTAGTTGGGCAATGCAAATTGCTAATATGAATAGGGATTGTTAA
                      ____________________________________________________________
consensus TCAAGATTTAGTTAGTTTAGTTGGGCAATGCAAATTGCTAATATGAATAGGGATTGTTAA
 
. : . : . : . : . : . :
rJMSF050O01+ ATGGAAAGCTGATTTGGATCTGTTTGTCTGTGTTATTAGGTAAGAAGTGTTGGGCATTC
rJMSF014G10+ ATGGAAAGCTGATTTGGATCTGTTTGTCTGTGTTATTAGGTAAGAAGTGTTGGGCATTCT
                      ____________________________________________________________
consensus ATGGAAAGCTGATTTGGATCTGTTTGTCTGTGTTATTAGGTAAGAAGTGTTGGGCATTCT