Contig 004216:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN044P18+                                                        AAATACAAGTAAAAA
JMFN013O16+                          AAAATTATTAGAGCTTATCAGATTCTTATAAAATACAAGTAAAAA
JMFS169H05+                                                           TACAAGTAAAAA
JMFF027A23+                                                           TACAAGTAAAAA
rJMFF041N21-                                                           ACAAGTAAAAA
JMFN034P05+                                                              AAGTAAAAA
JMFN020C11+                                                            ACAAGTAAAAA
JMFN044F01+                                                            ACAAGTAAAAA
JMFN030F16+                                                            ACAAGTAAAAA
JMFN046O14+                                                                  AAAAA
JMFN017C02+                                                            ACAAGTAAAAA
JMFN028I22+                                                            ACAAGTAAAAA
JMFN010I22+                                                            ACAAGTAAAAA
JMFN042E02+                                                            ACAAGTAAAAA
JMFF041N21+                                                            ACAAGTAAAAA
JMFN042K09+                                                             CAAGTAAAAA
JMFN043P23+                                                                  AAAAA
                      ____________________________________________________________
consensus                            AAAATTATTAGAGCTTATCAGATTCTTATAAAATACAAGTAAAAA
 
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JMFN044P18+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN013O16+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFS169H05+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFF027A23+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
rJMFF041N21-          GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN034P05+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN020C11+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN044F01+           GATATTTATNTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN030F16+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN046J10+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN046O14+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN017C02+           GATATTTATTTAGTCAATACATAATGGTTCCGTCCACGAATCACGATCGACATGAAATGA
JMSF020E12+                   TTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATTGACATGAAATGA
JMFN028I22+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN010I22+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN042E02+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
rJMFF027A23-                                                                     A
JMFN039O05+                                                                      A
JMFF041N21+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
rJMSF009P19-                                               GAATCACGATCGACATGAAATGA
rJMSF009O20-                                              CGAATCACGATCGACATGAAATGA
JMFN042K09+           GATATTTATNTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
JMFN043P23+           GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
rJMSF027B13-                                AATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
rJMSF012I16-                                             ACGAATCACGATCGACATGAAATGA
                      ____________________________________________________________
consensus             GATATTTATTTAGTCAATACATAATGGTTGCGTCCACGAATCACGATCGACATGAAATGA
 
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JMFN044P18+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN013O16+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFS169H05+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFF027A23+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
rJMFF041N21-          AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN034P05+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN020C11+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN044F01+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN030F16+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN046J10+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN046O14+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN017C02+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMSF020E12+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN028I22+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN010I22+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN042E02+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
rJMFF027A23-          AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
rJMSF020E12-            CGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN039O05+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN025D11+                                                                     AA
JMFF041N21+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
rJMSF009P19-          AACGTAGTTTCATACTATCTAGTTACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
rJMSF009O20-          AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN042K09+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN043P23+           AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
JMFN036H17+                                                        TTCGACCGAAATCAA
rJMSF027B13-          AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
rJMSF012I16-          AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
                      ____________________________________________________________
consensus             AACGTAGTTTCATACTATCTAG-TACAGTGGTAGAACCCTAGAACTTCGACCGAAATCAA
 
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JMFN044P18+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN013O16+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFS169H05+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFF027A23+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
rJMFF041N21-          AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN034P05+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN020C11+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN044F01+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN030F16+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN046J10+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN046O14+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN017C02+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMSF020E12+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN028I22+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN010I22+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN042E02+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
rJMFF027A23-          AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
rJMSF020E12-          AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN039O05+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN025D11+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFF041N21+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
rJMSF009P19-          AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
rJMSF009O20-          AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN042K09+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN043P23+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
JMFN036H17+           AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
rJMSF027B13-          AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
rJMSF012I16-          AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
                      ____________________________________________________________
consensus             AAGATCCAGATACTATAATTTCATACGAAACACAGACAGACAGACACAGATGTATATGTT
 
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JMFN044P18+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN013O16+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFS169H05+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFF027A23+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
rJMFF041N21-          CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN034P05+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN020C11+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN044F01+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN030F16+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN046J10+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN046O14+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN017C02+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMSF020E12+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN028I22+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN010I22+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN042E02+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
rJMFF027A23-          CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
rJMSF020E12-          CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN039O05+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN025D11+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCGCGACACATATTATT
rJMSF022E12-                      AACTGANCCTGCTNGCTTACTTCATCACGATTCACGACACATATTATT
JMFF041N21+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
rJMSF009P19-          CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
rJMSF009O20-          CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN042K09+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN043P23+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
JMFN036H17+           CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
rJMSF027B13-          CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
rJMSF012I16-          CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
                      ____________________________________________________________
consensus             CCATCGCCGTGGAACTGAACCTGCTAGCTTACTTCATCACGATTCACGACACATATTATT
 
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JMFN044P18+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN013O16+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFS169H05+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFF027A23+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
rJMFF041N21-          CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN034P05+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN020C11+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN044F01+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN030F16+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN046J10+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN046O14+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN017C02+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMSF020E12+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN028I22+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN010I22+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN042E02+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
rJMFF027A23-          CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
rJMSF020E12-          CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN039O05+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN025D11+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
rJMSF022E12-          CNNGCTGGANATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCANATCAGACAT
JMFF041N21+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
rJMSF009P19-          CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
rJMSF009O20-          CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMSF009O20+                                                              ATCAGAGAT
JMFN042K09+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN043P23+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
JMFN036H17+           CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
rJMSF027B13-          CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
rJMSF012I16-          CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
                      ____________________________________________________________
consensus             CAAGCTGGAAATAGTGAAATACTCGCAACCGTGGACGCACCAGATCTGCAGATCAGAGAT
 
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JMFN044P18+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN013O16+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFS169H05+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFF027A23+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
rJMFF041N21-          GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN034P05+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN020C11+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN044F01+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN030F16+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN046J10+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN046O14+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN017C02+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMSF020E12+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN028I22+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN010I22+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN042E02+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
rJMFF027A23-          GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
rJMSF020E12-          GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN039O05+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN025D11+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
rJMSF022E12-          GACTGGANTGTATCTAGTGNCGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFF041N21+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
rJMSF009P19-          GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
rJMSF009O20-          GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMSF009O20+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN042K09+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN043P23+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
JMFN036H17+           GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
rJMSF027B13-          GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
rJMSF012I16-          GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
                      ____________________________________________________________
consensus             GACTGGAGTGTATCTAGTGGTGATGGTGGTGGTGATGCGGTGGATGCGGATGGTGAACCG
 
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JMFN044P18+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN013O16+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFS169H05+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFF027A23+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
rJMFF041N21-          GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN034P05+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN020C11+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN044F01+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN030F16+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN046J10+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN046O14+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN017C02+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMSF020E12+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN028I22+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN010I22+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN042E02+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
rJMFF027A23-          GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
rJMSF020E12-          GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN039O05+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN025D11+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCGCGTGAACTA
rJMSF022E12-          GCGGCGGNNGATGATGGTGCACTA                                    
JMFF041N21+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
rJMSF009P19-          GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
rJMSF009O20-          GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMSF009O20+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN042K09+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN043P23+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
JMFN036H17+           GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
rJMSF027B13-          GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
rJMSF012I16-          GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGGTCGTGCACGTGAACTA
                      ____________________________________________________________
consensus             GCGGCGGGGGATGATGGTGCACTACTGGCGGAGGCGGCGGCGGATCGTGCACGTGAACTA
 
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JMFN044P18+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN013O16+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFS169H05+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFF027A23+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
rJMFF041N21-          CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN034P05+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN020C11+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN044F01+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN030F16+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN046J10+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN046O14+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN017C02+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMSF020E12+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN028I22+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN010I22+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN042E02+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
rJMFF027A23-          CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
rJMSF020E12-          CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN039O05+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN025D11+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFF041N21+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
rJMSF009P19-          CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
rJMSF009O20-          CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMSF009O20+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN042K09+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN043P23+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
JMFN036H17+           CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
rJMSF027B13-          CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
rJMSF012I16-          CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
                      ____________________________________________________________
consensus             CCGGCGGAGGTGGATGGTGGTGCACTACCGGCGGCGGCGGGGGATGGTGCACGACGTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044P18+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN013O16+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFS169H05+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFF027A23+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
rJMFF041N21-          CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN034P05+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN020C11+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATT 
JMFN044F01+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN030F16+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCC    
JMFN046J10+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN046O14+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGC     
JMFN017C02+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGG             
JMSF020E12+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN028I22+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGT                  
JMFN010I22+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGG                         
JMFN042E02+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGG                          
rJMFF027A23-          CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
rJMSF020E12-          CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN039O05+           CTACCGGCGGCGGCGGAGGTGAGTGTC                                 
JMFN025D11+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGT                        
JMFF041N21+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
rJMSF009P19-          CTACCG--GGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
rJMSF009O20-          CTACCG--GGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMSF009O20+           CTACCG--GGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN042K09+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN043P23+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
JMFN036H17+           CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
rJMSF027B13-          CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
rJMSF012I16-          CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
                      ____________________________________________________________
consensus             CTACCGGCGGCGGCGGAGGTGAGTGTCTATGCGGGTGGTGGTGTGGGCGGTGTGCCATTT
 
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JMFN044P18+           TG                                                          
JMFN013O16+           TG                                                          
JMFS169H05+           TGTCTTG                                                     
JMFF027A23+           TGTCTTGGGATTTTTTCT                                          
rJMFF041N21-          TGTCTTGGGATTTTTTCT                                          
JMFN034P05+           TGTCTTGGGATTTTTTC                                           
JMFN046J10+           TG                                                          
JMSF020E12+           TGTCTT                                                      
rJMFF027A23-          TGTCTTGGGATTTTTTCT                                          
rJMSF020E12-          TGTCTT                                                      
JMFF041N21+           TGTCTTGGGATTTTTTCT                                          
rJMSF009P19-          TGTCTTGGGATTTTTTCT                                          
rJMSF009O20-          TGTCTTGGGATTTTTTCT                                          
JMSF009O20+           TGTCTTGGGATTTTTTCT                                          
JMFN042K09+           TGTCTTGGGATTTTTTCTGGGCAAGGACAAAAGCGTTGAAGAGGATATATAGG       
JMFN043P23+           TGTCTTGGGATTTTTTCTGGGCAAGGACAAAAGCGTTGAAGAGGATATATAGGGATAAGA
JMFN036H17+           TGTCTTGGGATTTTTTCTGGGCAAGGACAAAAGCGTTGAAGAGGATATATAGGGATAAGA
rJMSF027B13-          TGTCTTGGGATTTTTTCTGGGCAAGGACAAAAGCGTTGAAGAGGATATATAGGGATAAGA
rJMSF012I16-          TGTCTTGGGATTTTTTCTGGGCAAGGACAAAAGCGTTGAAGAGGATATATAGGGATAAGA
                      ____________________________________________________________
consensus             TGTCTTGGGATTTTTTCTGGGCAAGGACAAAAGCGTTGAAGAGGATATATAGGGATAAGA
 
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JMFN043P23+           TTGAACTTAAGAACTAAGTAAAGGGATAACGACGTG                        
JMFN036H17+           TTGAACTTAAGAACTAAGTAAAGGGATAACGACGTGCGGTAGCGTGTAATGTATTCGCGG
rJMSF027B13-          TTGAACTTAAGAACTAAGTAAAGGGATAACGACGTGCGGTAGCGTGTAATGTATTCGCGG
rJMSF012I16-          TTGAACTTAAGAACTAAGTAAAGGGATAACGACGTGCGGTAGCGTGTAATGTATTCGCGG
                      ____________________________________________________________
consensus             TTGAACTTAAGAACTAAGTAAAGGGATAACGACGTGCGGTAGCGTGTAATGTATTCGCGG
 
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JMFN036H17+           AGATTGGAGAATGGAGATGTTAAGGTTGCGGGCTAAACACGTCAACGCGG          
rJMSF027B13-          AGATTGGAGAATGGAGATGTTAAGGTTGCGGGCTAAACACGTCAACGCGGTCGAGGCAAG
rJMSF012I16-          AGATTGGAGAATGGAGATGTTAAGGTTGCGGGCTAAACACGTCAACGCGGTCGAGGCNAG
                      ____________________________________________________________
consensus             AGATTGGAGAATGGAGATGTTAAGGTTGCGGGCTAAACACGTCAACGCGGTCGAGGCAAG
 
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rJMSF027B13-          CATGCCTGGAACTGGAAGTCTCCACCATAATAATTAAATACAAATTTCCAATGGTG    
rJMSF012I16-          CATGCCTGGAACTGGAAGTCTCCACCATAATAATTAAATACAAATTTCCAATGGTGGTAG
                      ____________________________________________________________
consensus             CATGCCTGGAACTGGAAGTCTCCACCATAATAATTAAATACAAATTTCCAATGGTGGTAG