| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007B06 | Sequence | 542 | 000179 (120) | gb|KDO44766.1| | 7e-67 | hypothetical protein CISIN_1g025092mg [Citrus sinensis] | 749 | 004215 (5) | ref|XP_002302688.2| | 266 | calcineurin-like phosphoesterase family protein [Populus trichocarpa] gb|EEE8196 |
| JMFF017H22 | Sequence | 609 | 010201 (4) | ref|XP_009798896.1| | 6e-61 | PREDICTED: probable inactive purple acid phosphatase 29 isoform X2 [Nicotiana s | 425 | 004215 (5) | ref|XP_011099522.1| | 1e-39 | PREDICTED: probable inactive purple acid phosphatase 29 isoform X3 [Sesamum ind |
| JMFF040G14 | Sequence | 544 | 010201 (4) | ref|XP_009798896.1| | 8e-72 | PREDICTED: probable inactive purple acid phosphatase 29 isoform X2 [Nicotiana s | 701 | 004215 (5) | ref|XP_002302688.2| | 265 | calcineurin-like phosphoesterase family protein [Populus trichocarpa] gb|EEE8196 |
| JMSF012C12 | Sequence | 492 | 010201 (4) | ref|XP_003637468.1| | 1e-35 | hypothetical protein MTR_087s0005, partial [Medicago truncatula] | 787 | 004215 (5) | ref|XP_002302688.2| | 266 | calcineurin-like phosphoesterase family protein [Populus trichocarpa] gb|EEE8196 |
| JMSF017C05 | Sequence | 418 | 010201 (4) | ref|XP_009798896.1| | 5e-40 | PREDICTED: probable inactive purple acid phosphatase 29 isoform X2 [Nicotiana s | 752 | 004215 (5) | ref|XP_002302688.2| | 322 | calcineurin-like phosphoesterase family protein [Populus trichocarpa] gb|EEE8196 |
This contig is upended
. : . : . : . : . : . :
rJMSF017C05+ TAGTGGGGATTATTCTACTGTTCCTTCCATCCCTGGATA
____________________________________________________________
consensus TAGTGGGGATTATTCTACTGTTCCTTCCATCCCTGGATA
. : . : . : . : . : . :
rJMSF017C05+ TGGTTGGATTAAACCCTCGCAACAAGTTTGGTTTCAGAACACTTCTCATAATCTTAAGAG
rJMFF040G14+ TAAGAG
rJMFF007B06+ TAAGAG
rJMSF012C12+ TAAGAG
____________________________________________________________
consensus TGGTTGGATTAAACCCTCGCAACAAGTTTGGTTTCAGAACACTTCTCATAATCTTAAGAG
. : . : . : . : . : . :
rJMSF017C05+ AACTTACATGAGCAGTCCTGCAGCTCAGAAGGTCCCAGCTCCAAGCCTTGTATACTTCCA
rJMFF040G14+ AACTTACATGAGCAGTCNTGCAGCTCAGAAGGTCCCAGCTCCAAGCCTTGTATACTTCCA
rJMFF007B06+ AACTTACATGAGCAGTCCTGCAGCTCAGAAGGTCCCAGCTCCAAGCCTTGTATACTTCCA
rJMSF012C12+ AACTTACATGAGCAGTCCTGCAGCTCAGAAGGTCCCAGCTCCAAGCCTTGTATACTTCCA
____________________________________________________________
consensus AACTTACATGAGCAGTCCTGCAGCTCAGAAGGTCCCAGCTCCAAGCCTTGTATACTTCCA
. : . : . : . : . : . :
rJMSF017C05+ TATTCCCTTGCCCGAATATGCAAGCTTCGACTCCTCAAACTTCACAGGTGTTAGACAGGA
rJMFF040G14+ TATTCCCTTGCCCGAATATGCAAGCTTCGACTCCTCAAACTTCACAGGTGTTAGACAGGA
rJMFF007B06+ TATTCCCTTGCCCGAATATGCAAGCTTCGACTCCTCAAACTTCACAGGTGTTAGACAGGA
rJMSF012C12+ TATTCCCTTGCCCGAATATGCAAGCTTCGACTCCTCAAACTTCACAGGTGTTAGACAGGA
____________________________________________________________
consensus TATTCCCTTGCCCGAATATGCAAGCTTCGACTCCTCAAACTTCACAGGTGTTAGACAGGA
. : . : . : . : . : . :
rJMSF017C05+ AGGCATTAGTTCTGCATCAATAAATTCTGGTTTCTTCACAACAATGGTGGAAACAGGAGA
rJMFF040G14+ AGGCATTAGTTCTGCATCAATAAATTCTGGTTTCTTCACAACAATGGTGGAAACAGGAGA
rJMFF007B06+ AGGCATTAGTTCTGCATCAATAAATTCTGGTTTCTTCACAACAATGGTGGAAACAGGAGA
rJMSF012C12+ AGGCATTAGTTCTGCATCAATAAATTCTGGTTTCTTCACAACAATGGTGGAAACAGGAGA
____________________________________________________________
consensus AGGCATTAGTTCTGCATCAATAAATTCTGGTTTCTTCACAACAATGGTGGAAACAGGAGA
. : . : . : . : . : . :
rJMFF017H22+ GGCATGATCACAAGAATGATTTTTNTGGGGAGTTGATGGG
rJMSF017C05+ CGTGAAGGGCGTTTTCACTGGGCATGATCACAAGAATGATTTTTGTGGGGAGTTGATGGG
rJMFF040G14+ CGTGAAGGGCGTTTTCACTGGGCATGATCACAAGAATGATTTTTGTGGGGAGTTGATGGG
rJMFF007B06+ CGTGAAGGGCGTTTTCACTGGGCATGATCACAAGAATGATTTTTGTGGGGAGTTGATGGG
rJMSF012C12+ CGTGAAGGGCGTTTTCACTGGGCATGATCACAAGAATGATTTTTGTGGGGAGTTGATGGG
____________________________________________________________
consensus CGTGAAGGGCGTTTTCACTGGGCATGATCACAAGAATGATTTTTGTGGGGAGTTGATGGG
. : . : . : . : . : . :
rJMFF017H22+ CATAAATCTGTGTTATGCTGGAGGCTTCGGTTACCATGCTTATGGGAAAGCTGGATGGGC
rJMSF017C05+ CATAAATCTGTGTTATGCTGGAGGCTTCGGTTACCATGCTTATGGGAAAGCTGGATGGGC
rJMFF040G14+ CATAAATCTGTGTTATGCTGGAGGCTTCGGTTACCATGCTTATGGGAAAGCTGGATGGGC
rJMFF007B06+ CATAAATCTGTGTTATGCTGGAGGCTTCGGTTACCATGCTTATGGGAAAGCTGGATGGGC
rJMSF012C12+ CATAAATCTGTGTTATGCTGGAGGCTTCGGTTACCATGCTTATGGGAAAGCTGGATGGGC
____________________________________________________________
consensus CATAAATCTGTGTTATGCTGGAGGCTTCGGTTACCATGCTTATGGGAAAGCTGGATGGGC
. : . : . : . : . : . :
rJMFF017H22+ AAGGAGGGCAAGGATGGTGGTAGCAACTTTGGAGAAGNCCGAGAAAGGAATATGGGGTGA
rJMSF017C05+ AAGGAGGGCAAGGATGGTGGTAGCAACTTTGGAGAAGACCGAGAAAGGAATATGGGGTGA
rJMFF040G14+ AAGGAGGGCAAGGATGGTGGTAGCAACTTTGGAGAAGACCGAGAAAGGAATATGGGGTGA
rJMFF007B06+ AAGGAGGGCAAGGATGGTGGTAGCAACTTTGGAGAAGACCGAGAAAGGAATATGGGGTGA
rJMSF012C12+ AAGGAGGGCAAGGATGGTGGTAGCAACTTTGGAGAAGACCGAGAAAGGAATATGGGGTGA
____________________________________________________________
consensus AAGGAGGGCAAGGATGGTGGTAGCAACTTTGGAGAAGACCGAGAAAGGAATATGGGGTGA
. : . : . : . : . : . :
rJMFF017H22+ TGTCAAATCTATCAGGACCTGGAAGCGACTCGATGATGAACACCTTACTACAATTGACCG
rJMSF017C05+ TGTCAAATCTATCAGGACCTGGAAGCGACTCGATGATGAACACCTTACTACAATTGACCG
rJMFF040G14+ TGTCAAATCTATCAGGACCTGGAAGCGACTCGATGATGAACACCTTACTACAATTGACCG
rJMFF007B06+ TGTCAAATCTATCAGGACCTGGAAGCGACTCGATGATGAACACCTTACTACAATTGACCG
rJMSF012C12+ TGTCAAATCTATCAGGACCTGGAAGCGACTCGATGATGAACACCTTACTACAATTGACCG
____________________________________________________________
consensus TGTCAAATCTATCAGGACCTGGAAGCGACTCGATGATGAACACCTTACTACAATTGACCG
. : . : . : . : . : . :
rJMFF017H22+ TGAAGTGCTTTGGAGCAAGAACTCTGGT----GCCGCAGAAAGAAGAAGATTAGCCACCC
rJMSF017C05+ TGAAGTGCTTTGGAGCAAGAACTCTGGTGGCAGCCGCAGAAAGAAGAAGATTAGCCACCC
rJMFF040G14+ TGAAGTGCTTTGGAGCAAGAACTCTGGTGGCAGCCGCAGAAAGAAGAAGATTAGCCACCC
rJMFF007B06+ TGAAGTGCTTTGGAGCAAGAACTCTGGTGGCAGCCGCAGAAAGAAGAAGATTAGCCACCC
rJMSF012C12+ TGAAGTGCTTTGGAGCAAGAACTCTGGTGGCAGCCGCAGAAAGAAGAAGATTAGCCACCC
____________________________________________________________
consensus TGAAGTGCTTTGGAGCAAGAACTCTGGTGGCAGCCGCAGAAAGAAGAAGATTAGCCACCC
. : . : . : . : . : . :
rJMFF017H22+ GCGCAGAAATTTCTGATTCTATTTGATNTAAATTAAAGCAGACTATTCCCGGCTGTCATA
rJMSF017C05+ GCGCAGAAATTTCTGATTCTATTTGATCTAAATTAAAGCAGACTATTCCCGGCTGTCATA
rJMFF040G14+ GCGCAGAAATTTCTGATTCTATTTGATCTAAATTAAAGCAGACTATTCCCGGCTGTCATA
rJMFF007B06+ GCGCAGAAATTTCTGATTCTATTTGATCTAAATTAAAGCAGACTATTCCCGGCTGTCATA
rJMSF012C12+ GCGCAGAAATTTCTGATTCTATTTGATCTAAATTAAAGCAGACTATTCCCGGCTGTCATA
____________________________________________________________
consensus GCGCAGAAATTTCTGATTCTATTTGATCTAAATTAAAGCAGACTATTCCCGGCTGTCATA
. : . : . : . : . : . :
rJMFF017H22+ CATAGTATTGTGCAATTATATGAATGATACGGAGTAGAATGTTAACACAGCAATATATAT
rJMSF017C05+ CATAGTATTGTGCAATTATATGAATGATACGGAGTAGAATGTTAACACAGCAATATATAT
rJMFF040G14+ CATAGTATTGTGCAATTATATGAATGATACGGAGTAGAATGTTAACACAGCAATATATAT
rJMFF007B06+ CATAGTATTGTGCAATTATATGAATGATACGGAGTAGAATGTTAACACAGCAATATATAT
rJMSF012C12+ CATAGTATTGTGCAATTATATGAATGATACGGAGTAGAATGTTAACACAGCAATATATAT
____________________________________________________________
consensus CATAGTATTGTGCAATTATATGAATGATACGGAGTAGAATGTTAACACAGCAATATATAT
. : . : . : . : . : . :
rJMFF017H22+ AAAGGTGAAAACTGACGAATTGAAGCTAG
rJMSF017C05+ AAAGGTGAAAACTGACGAATTGAAGCTAGATTGAATGAGTTGTGTTTGTAGTT
rJMFF040G14+ AAAGGTGAAAACTGACGAATTGAAGCTAGATTGAATGAGTTGTGTTTGTAGTTTGTACCA
rJMFF007B06+ AAAGGTGAAAACTGACGAATTGAAGCTAGATTGAATGAGTTGTGTTTGTAGTTTGTACCA
rJMSF012C12+ AAAGGTGAAAACTGACGAATTGAAGCTAGATTGAATGAGTTGTGTTTGTAGTTTGTACCA
____________________________________________________________
consensus AAAGGTGAAAACTGACGAATTGAAGCTAGATTGAATGAGTTGTGTTTGTAGTTTGTACCA
. : . : . : . : . : . :
rJMFF040G14+ AACTTGCATCTGTAGTAATAGATTTATGATTTT
rJMFF007B06+ AACTTGCATCTGTAGTAATAGATTTATGATTTTTGCATGTTTTGCTTCGTGTTGGTATCA
rJMSF012C12+ AACTTGCATCTGTAGTAATAGATTTATGATTTTTGCATGTTTTGCTTCGTGTTGGTATCA
____________________________________________________________
consensus AACTTGCATCTGTAGTAATAGATTTATGATTTTTGCATGTTTTGCTTCGTGTTGGTATCA
. : . : . : . : . : . :
rJMFF007B06+ GTCCTTGTTGAGAAT
rJMSF012C12+ GTCCTTGTTGAGAATTGAAACAAGTTGTAATGGCAGTTAATGAATAGTTTATATATGGTG
____________________________________________________________
consensus GTCCTTGTTGAGAATTGAAACAAGTTGTAATGGCAGTTAATGAATAGTTTATATATGGTG