Contig 004209:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007B20Sequence303016690ref|XP_007049441.1|9e-41Subtilisin-like serine endopeptidase family protein isoform 2 [Theobroma cacao]817004209 (2)emb|CAN62337.1|1e-97hypothetical protein VITISV_004299 [Vitis vinifera]
JMSF010P02Sequence292012127 (2)ref|XP_009591665.1|8e-31PREDICTED: subtilisin-like protease SBT5.3 [Nicotiana tomentosiformis]628004209 (2)ref|XP_002269456.2|1e-51PREDICTED: subtilisin-like protease SBT5.4, partial [Vitis vinifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+                                        AGTGAATGTGATAGCTGCCTTCACAGAAGC
                      ____________________________________________________________
consensus                                           AGTGAATGTGATAGCTGCCTTCACAGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          CACAGGGGCATCTGATAAAGATTATGATAAGAGGATTATTTCATTCAACTNGGAATCAGG
                      ____________________________________________________________
consensus             CACAGGGGCATCTGATAAAGATTATGATAAGAGGATTATTTCATTCAACTNGGAATCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          GACTTCAATGTCATGCCCTCATGTAGCTGGTGTTGTTGGCCTTCTCAAAACGCTGTATCC
                      ____________________________________________________________
consensus             GACTTCAATGTCATGCCCTCATGTAGCTGGTGTTGTTGGCCTTCTCAAAACGCTGTATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          TTCATGGAGCCCTGCAGAAATCAGATCTGCTATTATGACCACTGCCACAGTAAGAGCCAA
                      ____________________________________________________________
consensus             TTCATGGAGCCCTGCAGAAATCAGATCTGCTATTATGACCACTGCCACAGTAAGAGCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          CTCGGGGAAGGCGATAACTGACGACAAAACTGGACTGAAAACAACCCCATTTGCATATGG
rJMSF010P02+                                          GACTGAAAGCAACCCCATTTGCATATGG
                      ____________________________________________________________
consensus             CTCGGGGAAGGCGATAACTGACGACAAAACTGGACTGAAAGCAACCCCATTTGCATATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          AGCTGGACACGTAAACCCAAACGGCGCTGCAGATCCTGGCTTGGTCTACGACTTGAAACT
rJMSF010P02+          AGCTGGACACATAAACCCAAACCGCGCTGCAGATCCTGGCTTGGTNTACGACTTGAAACT
                      ____________________________________________________________
consensus             AGCTGGACACGTAAACCCAAACGGCGCTGCAGATCCTGGCTTGGTCTACGACTTGAAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          CACGGATTATGTCAACTTCATCTGCGCACAAGGCTACAACAAAACTGAGATCACGGCAGT
rJMSF010P02+          CACGGATTATGTCAACTTCATTTGCTCACAAGGCTACAATCAAACTGAGATCATGGCCNT
                      ____________________________________________________________
consensus             CACGGATTATGTCAACTTCATTTGCTCACAAGGCTACAATCAAACTGAGATCATGGCCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          TTTAGGGACACCATACAAGTGCCCAGACCACATTAGTCTCTCCACCTTCAACTATCCCTC
rJMSF010P02+          TTTAGGGNCNCCATACAAGTGCCCNGNCCNCNTTAGTCTNTCCNCCTTCAACTATCCCTC
                      ____________________________________________________________
consensus             TTTAGGGACACCATACAAGTGCCCAGACCACATTAGTCTCTCCACCTTCAACTATCCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          AATCACTGTCCCTCACCTCAAAGGCACAGCCACCGTAACAAGAACTCTGAAAAACGTCGG
rJMSF010P02+          AATTGCTGTCCCTCACCTCAAAGGCACAGCCNCCGTGACAAGAACTTTGAAGAACGTNGG
                      ____________________________________________________________
consensus             AATTGCTGTCCCTCACCTCAAAGGCACAGCCACCGTGACAAGAACTTTGAAGAACGTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          CTCTCCGGCTACCTACACAGCTTCTGTTCGTAGCCCGGTTGGATTCTCTGTCACTGTGAA
rJMSF010P02+          CTNTCCGGCTACCTACACAGNTTNTGTTTGTAGCCCGATTGGATTNTNTGTCNCTGTGAA
                      ____________________________________________________________
consensus             CTCTCCGGCTACCTACACAGCTTCTGTTTGTAGCCCGGTTGGATTCTCTGTCACTGTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          TCCCAAGATTCTCAAGTTCGAAAAGGTTGGCGAGGAGCAAAGTTTCAAAGTTACTCTCAA
rJMSF010P02+          CCCCNAGATTNTCAAGTTNGAAAAGGTTGGTGAGGAGCAAAGTTTCAAGGTTAGTNTCAA
                      ____________________________________________________________
consensus             TCCCAAGATTCTCAAGTTCGAAAAGGTTGGTGAGGAGCAAAGTTTCAAGGTTAGTCTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          GGCAAAGGGGGAAAACGCTACGGCTGATTATGCATTTGGGGTGTTAACATGGTCTGATAA
rJMSF010P02+          TGCAAAGGGGGAAAACGNTACTGCTGATTATGCNTTTGGGGNGTTAACNTGGTTTGATAA
                      ____________________________________________________________
consensus             TGCAAAGGGGGAAAACGCTACTGCTGATTATGCATTTGGGGTGTTAACATGGTTTGATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007B20+          AAAGCACCGTGTGAGAAGTCCCATTGTTGTGAAA                          
rJMSF010P02+          AAAGCCCCGTGTGAGAAGTCCCNTTGTTGTGAAAGCNGCAGCGTAGATGACAATCNTTAT
                      ____________________________________________________________
consensus             AAAGCCCCGTGTGAGAAGTCCCATTGTTGTGAAAGCNGCAGCGTAGATGACAATCNTTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010P02+          GGNCCNGGTCCNCNCTCCNCAATGCNTTGTAAATCCTGATTCTATATTCGTTNTGAATTC
                      ____________________________________________________________
consensus             GGNCCNGGTCCNCNCTCCNCAATGCNTTGTAAATCCTGATTCTATATTCGTTNTGAATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010P02+          TAATTTTGATGGNGATTTTTTTTTTTGAATGCTACTGGCTCTATTACCAATGTAGTATAT
                      ____________________________________________________________
consensus             TAATTTTGATGGNGATTTTTTTTTTTGAATGCTACTGGCTCTATTACCAATGTAGTATAT