| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF001E05 | Sequence | 427 | 005153 (8) | ref|XP_011095665.1| | 2e-38 | PREDICTED: peroxisome biogenesis protein 5 [Sesamum indicum] | 758 | 004205 (5) | gb|AAC69181.1| | 3e-78 | peroxisomal targeting sequence 1 receptor [Nicotiana tabacum] |
| JMSF010B16 | Sequence | 238 | 005153 (8) | ref|XP_010928166.1| | 56.2 | PREDICTED: peroxisome biogenesis protein 5-like [Elaeis guineensis] | 757 | 004205 (5) | gb|AAC69181.1| | 7e-79 | peroxisomal targeting sequence 1 receptor [Nicotiana tabacum] |
| JMSF030F24 | Sequence | 648 | 005153 (8) | ref|XP_004248297.1| | 1e-70 | PREDICTED: peroxisome biogenesis protein 5 [Solanum lycopersicum] | 646 | 004205 (5) | gb|AAC69181.1| | 7e-110 | peroxisomal targeting sequence 1 receptor [Nicotiana tabacum] |
| JMSF043F01 | Sequence | 678 | 005153 (8) | ref|XP_004248297.1| | 1e-77 | PREDICTED: peroxisome biogenesis protein 5 [Solanum lycopersicum] | 737 | 004205 (5) | gb|AAC69181.1| | 1e-135 | peroxisomal targeting sequence 1 receptor [Nicotiana tabacum] |
| JMSF045J15 | Sequence | 776 | 005153 (8) | ref|XP_004248297.1| | 3e-101 | PREDICTED: peroxisome biogenesis protein 5 [Solanum lycopersicum] | 688 | 004205 (5) | emb|CAN71162.1| | 5e-67 | hypothetical protein VITISV_015705 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF043F01+ TTGGAAGTCCTCCTTGCCCTTGGGGTGAGCCACA
____________________________________________________________
consensus TTGGAAGTCCTCCTTGCCCTTGGGGTGAGCCACA
. : . : . : . : . : . :
rJMSF043F01+ CAAATGAACTGGAACAAGCAGCTGCATTGAAGTATTTGTACAGTTGGTTACGCCATCACC
____________________________________________________________
consensus CAAATGAACTGGAACAAGCAGCTGCATTGAAGTATTTGTACAGTTGGTTACGCCATCACC
. : . : . : . : . : . :
rJMSF043F01+ CTAAGTATGGAAGTATTGCCCCTGCAGATCAACCTGAGTCCCTATATTATGCAGATGTTG
rJMSF030F24+ GGAAGTATTGCCCCTGCAGATCAACCTGAGTCCCTATATTATGCAGATGTTG
____________________________________________________________
consensus CTAAGTATGGAAGTATTGCCCCTGCAGATCAACCTGAGTCCCTATATTATGCAGATGTTG
. : . : . : . : . : . :
rJMSF043F01+ CTAGATTATTTAATGATGCTGCTCAAATGGCACCTGATGACGCTGATGTACACATAGTAC
rJMSF030F24+ CTAGATTATTTAATGATGCTGCTCAAATGGCACCTGATGACGCTGATGTACACATAGTAC
____________________________________________________________
consensus CTAGATTATTTAATGATGCTGCTCAAATGGCACCTGATGACGCTGATGTACACATAGTAC
. : . : . : . : . : . :
rJMSF043F01+ TGGGAGTATTATACAACTTATCAAGGGAGTATGATAAAGCTATTGAATCATTTAAAATTG
rJMSF030F24+ TGGGAGTATTATACAACTTATCAAGGGAGTATGATAAAGCTATTGAATCATTTAAAATTG
rJMSF001E05+ AGGGAGTATGATAAAGCTATTGAATCATTTAAAATTG
rJMSF010B16+ AGGGAGTATGATAAAGCTATTGAATCATTTAAAATTG
____________________________________________________________
consensus TGGGAGTATTATACAACTTATCAAGGGAGTATGATAAAGCTATTGAATCATTTAAAATTG
. : . : . : . : . : . :
rJMSF043F01+ CTTTGAAACTCAAGCCACGAGACTACTCACTCTGGAATAAGCTTGGCGCTACACAGGCTA
rJMSF030F24+ CTTTGAAACTCAAGCCACGAGACTACTCACTCTGGAATAAGCTTGGCGCTACACAGGCTA
rJMSF001E05+ CNTTGGAACTCAAGCCACGAGACTACTCACTCTGGAATAAGCTTGGCGCTACACAGGCTA
rJMSF045J15+ ACTCAAGCCACGAGACTACTCACTCTGGAATAAGCTTGGCGCTACACAGGCTA
rJMSF010B16+ CTTTGAAACTCAAGCCACGAGACTACTCACTCTGGAATAAGCTTGGCGCTACACAGGCTA
____________________________________________________________
consensus CTTTGAAACTCAAGCCACGAGACTACTCACTCTGGAATAAGCTTGGCGCTACACAGGCTA
. : . : . : . : . : . :
rJMSF043F01+ ACAGTGTTCAGAGTGCTGATGCAATATTGGCCTATCAGCAGGCACTAGATTTGAAACCGA
rJMSF030F24+ ACAGTGTTCAGAGTGCTGATGCAATATTGGCCTATCAGCAGGCACTAGATTTGAAACCGA
rJMSF001E05+ ACAGTGTTCAGAGTGCTGATGCAATATTGGCCTATCAGCAGGCACTAGATTTGAAACCGA
rJMSF045J15+ ACAGTGNTCAGAGTGCTGATGCAATATTGGCCTATCAGCAGGCNCTAGATTTGAAACCGA
rJMSF010B16+ ACAGTGTTCAGAGTGCTGATGCAATATTGGCCTATCAGCAGGCACTAGATTTGAAACCGA
____________________________________________________________
consensus ACAGTGTTCAGAGTGCTGATGCAATATTGGCCTATCAGCAGGCACTAGATTTGAAACCGA
. : . : . : . : . : . :
rJMSF043F01+ ATTATGTGCGTGCATGGGCAAACATGGGTATCAGTTATGCCAACCAGGGTATGTACGAGG
rJMSF030F24+ ATTATGTGCGTGCATGGGCAAACATGGGTATCAGTTATGCCAACCAGGGTATGTACGAGG
rJMSF001E05+ ATTATGTGCGTGCATGGGCAAACATGGGTATCAGTTATGCCAACCAGGGTATGTACGAGG
rJMSF045J15+ ATTATGTGCGTGCATGGGCAAACATGGGTATCAGTTATGCCAACCNGGGTATGTACGAGG
rJMSF010B16+ ATTATGTGCGTGCATGGGCAAACATGGGTATCAGTTATGCCAACCAGGGTATGTACGAGG
____________________________________________________________
consensus ATTATGTGCGTGCATGGGCAAACATGGGTATCAGTTATGCCAACCAGGGTATGTACGAGG
. : . : . : . : . : . :
rJMSF043F01+ ACTCTATTCGTTATTATGTCCGTGCATTAGGAATGAATCCAAAGGCAGATAATGCATGGC
rJMSF030F24+ ACTCTATTCGTTATTATGTCCGTGCATTAGGAATGAATCCAAAGGCAGATAATGCATGGC
rJMSF001E05+ ACTCTATTCGTTATTATGTCCGTGCATTAGGAATGAATCCAAAGGCAGATAATGCATGGC
rJMSF045J15+ ACTCTATTCGTTATTATGTCCGTGCATTAGGAATGAATCCAAAGGCAGATAATGCATGGC
rJMSF010B16+ ACTCTATTCGTTATTATGTCCGTGCATTAGGAATGAATCCAAAGGCAGATAATGCATGGC
____________________________________________________________
consensus ACTCTATTCGTTATTATGTCCGTGCATTAGGAATGAATCCAAAGGCAGATAATGCATGGC
. : . : . : . : . : . :
rJMSF043F01+ AATATTTGAGAATTTCTTTGAGCTGTGCATCACGAAATGATATGATTGAAGCTTGCGATT
rJMSF030F24+ AATATTTGAGAATTTCTTTGAGCTGTGCATCACGAAATGATATGATTGAAGCTTGCGATT
rJMSF001E05+ AATATTTGAGAATTTCTTTGAGCTGTGCATCACGAAATGATATGATTGAAGCTTGCGATT
rJMSF045J15+ AATATTTGAGAATTTCTTTGAGCTGTGCATCNCGAAATGATATGATTGAAGCTTGCGATT
rJMSF010B16+ AATATTTGAGAATTTCTTTGAGCTGTGCATCACGAAATGATATGATTGAAGCTTGCGATT
____________________________________________________________
consensus AATATTTGAGAATTTCTTTGAGCTGTGCATCACGAAATGATATGATTGAAGCTTGCGATT
. : . : . : . : . : . :
rJMSF043F01+ CACGGAACCTTGATGTTCTCCAAAAAGAGTTCCCCTTATAAATACAAAAAATGTGGCATG
rJMSF030F24+ CACGGAACCTTGATGTTCTCCAAAAAGAGTTCCCCTTATAAATACAAAAAATGTGGCATG
rJMSF001E05+ CACGGAACCTTGATGTTCTCCAAAAAGAGTTCCCCTTATAAATACAAAAAATGTGGCATG
rJMSF045J15+ CACGGAACCTTGATGTTCTCCAAAAAGAGTTCCCCTTATAAATACAAAAAATGTGGCATG
rJMSF010B16+ CACGGAACCTTGATGTTCTCCAAAAAGAGTTCCCCTTATAAATACAAAAAATGTGGCATG
____________________________________________________________
consensus CACGGAACCTTGATGTTCTCCAAAAAGAGTTCCCCTTATAAATACAAAAAATGTGGCATG
. : . : . : . : . : . :
rJMSF043F01+ CTTCTAACACGTGATCAAATGAGGCATGTGCATGAAGTTGCAAGACCATCCAATTGAGCC
rJMSF030F24+ CTTCTAACACGTGATCAAATGAGGCATGTGCATGAAGTTGCAAGACCATCCAATTGAGCC
rJMSF001E05+ CTTCTAACACGTGATCAAATGAGGCATGTGCATGAAGTTGCAAGACCATCCAATTGAGCC
rJMSF045J15+ CTTCTAACACGTGATCAAATGAGGCATGTGCATGAAGTTGCAAGACCATCCAATTGAGCC
rJMSF010B16+ CTTCTAACACGTGATCAAATGAGGCATGTGCATGAAGTTGCAAGACCATCCAATTGAGCC
____________________________________________________________
consensus CTTCTAACACGTGATCAAATGAGGCATGTGCATGAAGTTGCAAGACCATCCAATTGAGCC
. : . : . : . : . : . :
rJMSF043F01+ GATATTTTCTTTAGTTATTAATATCTTGAATCACAATTACTAT
rJMSF030F24+ GATATTTTCTTTAGTTATTAATATCTTGAATCACAATTACTATTGTTCATCACT
rJMSF001E05+ GATATTTTCTTTAGTTATTAATATCTTGAATCACAATTACTATTGTTCATCACTTATTTG
rJMSF045J15+ GATATTTTCTTTAGTTATTAATATCTTGAATCACAATTACTATTGTTCATCACTTATTTG
rJMSF010B16+ GATATTTTCTTTAGTTATTAATATCTTGAATCACAATTACTATTGTTCATCACTTATTTG
____________________________________________________________
consensus GATATTTTCTTTAGTTATTAATATCTTGAATCACAATTACTATTGTTCATCACTTATTTG
. : . : . : . : . : . :
rJMSF001E05+ GATCCCTTAATAATACTAGTGTGGTTCACTCATTCAGAACTAGAGGATCAACTAGCAGCA
rJMSF045J15+ GATCCCTTAATAATACTAGTGTGGTTCACTCATTCAGAACTAGAGGATCAACTAGCAGCA
rJMSF010B16+ GATCCCTTAATAATACTAGTGTGGTTCACTCATTCAGAACTAGAGGATCAACTAGCAGCA
____________________________________________________________
consensus GATCCCTTAATAATACTAGTGTGGTTCACTCATTCAGAACTAGAGGATCAACTAGCAGCA
. : . : . : . : . : . :
rJMSF001E05+ CTTTTCCGAAATTTTATAAAGCTCCAACTGCCACCGGGTAACCTAGAGGTAGGTGTAGTT
rJMSF045J15+ CTTTTCCGAAATTTTATAAAGCTCCAACTGCCCCCGGGTAACCTAGAGGTAGGTGTAGTT
rJMSF010B16+ CTTTTCCGAAATTTTATAAAGCTCCAACTGCCACCGGGTAACCTAGAGGTAGGTGTAGTT
____________________________________________________________
consensus CTTTTCCGAAATTTTATAAAGCTCCAACTGCCACCGGGTAACCTAGAGGTAGGTGTAGTT
. : . : . : . : . : . :
rJMSF001E05+ TGAGAAACACTGCTATGAAGTTGATTGTATGTTTGGAGTGGGGGAAAATAGTCGACCTTG
rJMSF045J15+ TGAGAAACNCTGCTATGAAGTTGATTGTATGTTTGGAGTGGGGGAAAATAGTCGACCTTG
rJMSF010B16+ TGAGAAACACTGCTATGAAGTTGATTGTATGTTTGGAGTGGGGGAAAATAGTCGACCTTG
____________________________________________________________
consensus TGAGAAACACTGCTATGAAGTTGATTGTATGTTTGGAGTGGGGGAAAATAGTCGACCTTG
. : . : . : . : . : . :
rJMSF001E05+ TTAGGGTGGTAAAGAAAAATAAGCTGTTGTAGAGTTCACCATTGTATAAATGTGAGTACC
rJMSF045J15+ TTAGGGTGGTAAAGAAAAATAAGCTGTTGTAGAGT
rJMSF010B16+ TTAGGGTGGTAAAGAAAAATAAGCTGTTGTAGAGTTCACCATTGTATAAATGTGAGTACC
____________________________________________________________
consensus TTAGGGTGGTAAAGAAAAATAAGCTGTTGTAGAGTTCACCATTGTATAAATGTGAGTACC