Contig 004204:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029D16Sequence577008242 (5)emb|CBI34507.3|1e-28unnamed protein product [Vitis vinifera]665004204 (6)ref|XP_009764745.1|1e-63PREDICTED: uncharacterized protein At3g28850 [Nicotiana sylvestris]
JMFF035K17Sequence509004204 (6)ref|XP_009764745.1|2e-61PREDICTED: uncharacterized protein At3g28850 [Nicotiana sylvestris]236008242 (5)
JMFF048H24Sequence427008242 (5)emb|CBI34507.3|5e-29unnamed protein product [Vitis vinifera]395004204 (6)ref|XP_006343832.1|5e-22PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1-like isoform
JMSF009J08Sequence267008242 (5)gb|KDP25281.1|9e-15hypothetical protein JCGZ_20437 [Jatropha curcas]758004204 (6)ref|XP_006343832.1|5e-65PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1-like isoform
JMSF045A10Sequence676004204 (6)ref|XP_004245502.1|6e-56PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Solanum lyco618004204 (6)ref|XP_006343832.1|4e-47PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1-like isoform

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+                                  TCGGACAGAAGGGTTCAAGTCAGTAAAGGATAACATA
                      ____________________________________________________________
consensus                                    TCGGACAGAAGGGTTCAAGTCAGTAAAGGATAACATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+           TTCCTGGTACGCGACAGAATGGAGAAGGAAAAAGACGGAAAACCCGCCGCCGCATTCATC
JMSF045A10-                     GCGACAGAATGGAGAAGGAAAAAGACGGAAAACCCGCCGCCGCATTCATC
rJMFF029D16+                                                 AAACCCGCCGCCGCATTCATC
rJMSF009J08+                                                 AAACCCGCCGCCGCATTCATC
                      ____________________________________________________________
consensus             TTCCTGGTACGCGACAGAATGGAGAAGGAAAAAGACGGAAAACCCGCCGCCGCATTCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+           AAGCGGGACCCACTTAGCGACTTCCCGGAGAAATGCCCGCCGGGAGGGGAAACCACGGTG
JMSF045A10-           AAGCGGGACCCACTTAGCGACTTCCCGGAGAAATGCCCGCCGGGAGGGGAAACCACGGTG
rJMFF029D16+          AAGCGGGACCCACTTAGCGACTTCCCGGAGAAATGCCCGCCGGGAGGGGAAACCACGGTG
rJMSF045A10+                                                              CCACGGTG
rJMSF009J08+          AAGCGGGACCCACTTAGCGACTTCCCGGAGAAATGCCCGCCGGGAGGGGAAACCACGGTG
                      ____________________________________________________________
consensus             AAGCGGGACCCACTTAGCGACTTCCCGGAGAAATGCCCGCCGGGAGGGGAAACCACGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+           GTGCTCTACACAACCTCCTTGGGCGGCGTCCGCCGCACCTTCGAGGACTGCAACAACGTA
JMSF045A10-           GTGCTCTACACAACCTCCTTGGGCGGCGTCCGCCGCACCTTCGAGGACTGCAACAACGTA
rJMFF029D16+          GTGCTCTACACAACCTCCTTGGGCGGCGTCCGCCGCACCTTCGAGGACTGCAACAACGTA
rJMSF045A10+          GTGCTCTACACAACCTCCTTGGGCGGCGTCCGCCGCACCTTCGAGGACTGCAACAACGTA
rJMSF009J08+          GTGCTCTACACAACCTCCTTGGGCGGCGTCCGCCGCACCTTCGAGGACTGCAACAACGTA
                      ____________________________________________________________
consensus             GTGCTCTACACAACCTCCTTGGGCGGCGTCCGCCGCACCTTCGAGGACTGCAACAACGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+           AGGGCCATCCTGGAGTCCCACCGCGTGGTGTTCGACGAGCGCGACGTGGCGTTGCACGGC
JMSF045A10-           AGGGCCATCCTGGAGTCCCACCGCGTGGTGTTCGACGAGCGCGACGTGGCGTTGCACGGC
rJMFF029D16+          AGGGCCATCCTGGAGTCCCACCGCGTGGTGTTCGNCGAGCGCGACGTGGCGTTGCACGGC
rJMSF045A10+          AGGGCCATCCTGGAGTCCCACCGCGTGGTGTTCGACGAGCGCGACGTGGCGTTGCACGGC
rJMSF009J08+          AGGGCCATCCTGGAGTCCCACCGCGTGGTGTTCGACGAGCGCGACGTGGCGTTGCACGGC
                      ____________________________________________________________
consensus             AGGGCCATCCTGGAGTCCCACCGCGTGGTGTTCGACGAGCGCGACGTGGCGTTGCACGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+           GAGTTCCGCGGCGAGCTGAGAGAGCTGCTCGGGGAGGGGTTCGGCGGCGTGCCGCGGCTG
JMSF045A10-           GAGTTCCGCGGCGAGCT--GATAGCTGCTCGGGAAGGGGTTCGGCGGCGTGCCGCGGCTG
rJMFF029D16+          GAGTTCCGCGGCGAGCTGAGAGAGCTGCTCGGGGAGGGGTTCGNCGGCGTNCCGCGGCTG
rJMSF045A10+          GAGTTCCGCGGCGAGCT--GATAGCTGCTCGGGAAGGGGTTCGGCGGCGTGCCGCGGCTG
rJMSF009J08+          GAGTTCCGCGGCGAGCTGAGAGAGCTGCTCGGGGAGGGGTTCGGCGGCGTGCCGCGGCTG
                      ____________________________________________________________
consensus             GAGTTCCGCGGCGAGCTGAGATAGCTGCTCGGGGAGGGGTTCGGCGGCGTGCCGCGGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+           TTCGTGAAGGGGAGGTACGTCGGCGGGGCGGAGGAGGTGGTGGGTCTCAACGACGCGGGT
JMSF045A10-           TTCGTGAAGGGGAGGTACGTCGGCGGGGCGGAGGAGGTGGTGGGTCTCAACGACGCGGGT
rJMFF029D16+          TTCGTGAAGGGGAGGTACGTCGGCGGGGCGGAGGAGGTGGTGGGTCTCANCGACGCGGGT
rJMSF045A10+          TTCGTGAAGGGGAGGTACGTCGGCGGGGCGGAGGAGGTGGTGGGTCTCAACGACGCGGGT
rJMFF048H24+                                  GGGGCGGAGGAGGTGGTGGTTCTCAACGACGCGTGT
rJMSF009J08+          TTCGTGAAGGGGAGGTACGTCGGCGGGGCGGAGGAGGTGGTGGGTCTCAACGACGCGGGT
                      ____________________________________________________________
consensus             TTCGTGAAGGGGAGGTACGTCGGCGGGGCGGAGGAGGTGGTGGGTCTCAACGACGCGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+           CGACTCGGGAGGATACTGAGTTGGGCACGAGTTGAGAGGGGTGTGGGGAATCAGGGGTGT
JMSF045A10-           CGACTCGGGAGGATACTGAGTTGGGCACGAGTTGAGAGGGGTGTGGGGAATCAGGGGTGT
rJMFF029D16+          CGNCTCGGGAGGATANTGAGTTGGGCACGAGTTGAGAGGGGTGTGGGGAATCAGGGGTGT
rJMSF045A10+          CGACTCGGGAGGATACTGAGTTGGGCACGAGTTGAGAGGGGTGTGGGGAATCAGGGGTGT
rJMFF048H24+          CGACTCGGGAGGATACTGAGTTGGGCACGAGTTGAGAGGGGTGTGGGGAATCAGGGGTGT
rJMSF009J08+          CGACTCGGGAGGATACTGAGTTGGGCACGAGTTGAGAGGGGTGTGGGGAATCAGGGGTGT
                      ____________________________________________________________
consensus             CGACTCGGGAGGATACTGAGTTGGGCACGAGTTGAGAGGGGTGTGGGGAATCAGGGGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K17+           GAAGGGTGTGGTGGAGTAAGGTTTGTGCCGTGTTTGGATTGTGGAGGAAGTT        
JMSF045A10-           GAAGGGTGTGGTGGAGTAAGGTTTGTGCCGTGTTTGGATTGTGGAGGAAGTTGTAANATT
rJMFF029D16+          GAAGGGTGTGGTGGAGTAAGGTTTGTGCCGTGTTTGGATTGTGGAGGAAGTTGTAAGATT
rJMSF045A10+          GAAGGGTGTGGTGGAGTAAGGTTTGTGCCGTGTTTGGATTGTGGAGGAAGTTGTAAGATT
rJMFF048H24+          GAAGGGTGTGGTGGAGTAAGGTTTGTGCCGTGTTTGGATTGTGGAGGAAGTTGTAAGATT
rJMSF009J08+          GAAGGGTGTGGTGGAGTAAGGTTTGTGCCGTGTTTGGATTGTGGAGGAAGTTGTAAGATT
                      ____________________________________________________________
consensus             GAAGGGTGTGGTGGAGTAAGGTTTGTGCCGTGTTTGGATTGTGGAGGAAGTTGTAAGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045A10-           GTGAATGGNGACAANAANGAAANGTGTGNNNAGTGCAACNAAAATGNATTGNTTCAATGT
rJMFF029D16+          GTGAATGGGGACAAGAAGGAAAGGTGTGGGGAGTGCAACGAAAATGGATTGGTTCAATGT
rJMSF045A10+          GTGAATGGGGACAAGAAGGAAAGGTGTGGGGAGTGCAACGAAAATGGATTGGTTCAATGT
rJMFF048H24+          GTGAATGGGGACAAGAAGGAAAGGTGTGGGGAGTGCAACGAAAATGGATTGGTTCAATGT
rJMSF009J08+          GTGAATGGGGACAAGAAGGAAAGGTGTGGGGAGTGCAACGAAAATGGATTGGTTCAATGT
                      ____________________________________________________________
consensus             GTGAATGGGGACAAGAAGGAAAGGTGTGGGGAGTGCAACGAAAATGGATTGGTTCAATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045A10-           CCTATTTGCCATTAATAANGTANCTATTATTTTCTCAAAATACTGCTTACTGAAATANTG
rJMFF029D16+          CCTATTTGCCATTAATAAGGTAGCTATTATTTTCTCAAAATACTGCTTACTGAAATAGTG
rJMSF045A10+          CCTATTTGCCATTAATAAGGTAGCTATTATTTTCTCAAAATACTGCTTACTGAAATAGTG
rJMFF048H24+          CCTATTTGCCATTAATAAGGTAGCTATTATTTTCTCAAAATACTGCTTACTGAAATAGTG
rJMSF009J08+          CCTATTTGCCATTAATAAGGTAGCTATTATTTTCTCAAAATACTGCTTACTGAAATAGTG
                      ____________________________________________________________
consensus             CCTATTTGCCATTAATAAGGTAGCTATTATTTTCTCAAAATACTGCTTACTGAAATAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045A10-           AACTAAACTCNCATGNACATAANATANTTATTTTGTAATTTGCTCTGNNCTTGATATNCN
rJMFF029D16+          AACTAAACTCGCATNGACATAAGATAGTTATTTTGTAATTTGCTCTGGGCTTGATATGCA
rJMSF045A10+          AACTAAACTCGCATGGACATAAGATAGTTATTTTGTAATTTGCTCTGGGCTTGATATGCA
rJMFF048H24+          AACTAAACTCGCATGGACATAAGATAGTTATTTTGTAATTTGCTCTGGGCTTGATATGCA
rJMSF009J08+          AACTAAACTCGCATGGACATAAGATAGTTATTTTGTAATTTGCTCTGGGCTTGATATGCA
                      ____________________________________________________________
consensus             AACTAAACTCGCATGGACATAAGATAGTTATTTTGTAATTTGCTCTGGGCTTGATATGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045A10-           CAATTTTATCTTANCTTTTATTAA                                    
rJMFF029D16+          CAATTTTATCTTAGCTTTTATTAAGCAT                                
rJMSF045A10+          CAATTTTATCTTAGCTTTTATTAAGCATGCATAAATAATACCAATGTAAATCAAGAAATA
rJMFF048H24+          CAATTTTATCTTAGCTTTTATTAAGCATGCATAAATAATACCAATGTAAATCAAGAAAT 
rJMSF009J08+          CAATTTTATCTTAGCTTTTATTAAGCATGCATAAATAATACCAATGTAAATCAAGAAATA
                      ____________________________________________________________
consensus             CAATTTTATCTTAGCTTTTATTAAGCATGCATAAATAATACCAATGTAAATCAAGAAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF045A10+          TATATGTTTTGG                                                
rJMSF009J08+          TATATGTTTTGGGTATTTTAAAGTGCTATAGTGCTTCTCTTGTGTTGCAATTATCATTAG
                      ____________________________________________________________
consensus             TATATGTTTTGGGTATTTTAAAGTGCTATAGTGCTTCTCTTGTGTTGCAATTATCATTAG