Contig 004202:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004M03Sequence358004202 (3)128001240 (11)gb|KDP25414.1|6e-07hypothetical protein JCGZ_20570 [Jatropha curcas]
JMSF009G09Sequence363004202 (3)310004202 (3)

Alignment

This contig is upended


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JMSF009G09+                                                                    TTA
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consensus                                                                      TTA
 
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JMSF004M03+                    GACAGCAATATTGCTCGTAGCACCAAATGCTAATACAAAATTTTAAACTTA
JMSF009G09+           TTAAAACAAGACAGCAATATTGCTCGTAGCACCAAATGCTAATACAAAATTTTAAACTTA
rJMSF009G09-                                                            TTTAAACTTA
                      ____________________________________________________________
consensus             TTAAAACAAGACAGCAATATTGCTCGTAGCACCAAATGCTAATACAAAATTTTAAACTTA
 
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JMSF004M03+           AAAAGGTACAAAATATATTGGCCACCATATCCACTCCAGGTTGTACAACCTAAATTGACT
JMSF009G09+           AAAAGGTACAAAATATATTGGCCACCATATCCACTCCAGGTTGTACAACCTAAATTGACT
rJMSF009G09-          AAAAGGTACAAAATATATTGGCCACCATATCCACTCCAGGTTGTACAACCTAAATTGACT
                      ____________________________________________________________
consensus             AAAAGGTACAAAATATATTGGCCACCATATCCACTCCAGGTTGTACAACCTAAATTGACT
 
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JMSF004M03+           TTGAGCTTGAAATAACATATATGAACAATAAAAGGTATATAAAAATATTACACAGATTCT
JMSF009G09+           TTGAGCTTGAAATAACATATATGAACAATAAAAGGTATATAAAAATATTACACAGATTCT
rJMSF009G09-          TTGAGCTTGAAATAACATATATGAACAATAAAAGGTATATAAAAATATTACACAGATTCT
                      ____________________________________________________________
consensus             TTGAGCTTGAAATAACATATATGAACAATAAAAGGTATATAAAAATATTACACAGATTCT
 
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JMSF004M03+           TGAAACTTCCTAACGTTGTGTTGTCTCCGTGCAATGATGCAGTTATTGCAAAGCAATATA
JMSF009G09+           TGAAACTTCCTAACGTTGTGTTGTCTCCGTGCAATGATGCAGTTATTGCAAAGCAATATA
rJMSF009G09-          TGAAACTTCCTAACGTTGTGTTGTCTCCGTGCAATGATGCAGTTATTGCAAAGCAATATA
                      ____________________________________________________________
consensus             TGAAACTTCCTAACGTTGTGTTGTCTCCGTGCAATGATGCAGTTATTGCAAAGCAATATA
 
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JMSF004M03+           CATATAGCATGTTATTTCAGCCTTCCATTGACATGCACCTATCAAAAAGTAGAGCACAGA
JMSF009G09+           CATATAGCATGTTATTTCAGCCTTCCATTGACATGCACCTATCAAAAAGTAGAGCACAGA
rJMSF009G09-          CATATAGCATGTTATTTCAGCCTTCCATTGACATGCACCTATCAAAAAGTAGAGCACAGA
                      ____________________________________________________________
consensus             CATATAGCATGTTATTTCAGCCTTCCATTGACATGCACCTATCAAAAAGTAGAGCACAGA
 
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JMSF004M03+           GAGCTGAAATCGACATTATATTCTTCCTATCCTAGCATCTCATAATTGTCAATCCCGAAC
JMSF009G09+           GAGCTGAAATCGACATTATATTCTTCCTATCCTAGCATCTCATAATTGTCAATCCCGAAC
rJMSF009G09-          GAGCTGAAATCGACATTATATTCTTCCTATCCTAGCATCTCATAATTGTCAATCCCGAAC
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consensus             GAGCTGAAATCGACATTATATTCTTCCTATCCTAGCATCTCATAATTGTCAATCCCGAAC