Contig 004196:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020G22+                                                          GGACTGAGCTGG
                      ____________________________________________________________
consensus                                                             GGACTGAGCTGG
 
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rJMSF020G22+          AGAGGAAGAATTGGACCAGAACTTACAAAAAGATGCTCCTCTCCTGAAAAATTTATACCA
rJMSF008O01+                 GAATTGGACCAGAACTTACAAAAAGATGCTCCTCTCCTGAAAAATTTATACCA
                      ____________________________________________________________
consensus             AGAGGAAGAATTGGACCAGAACTTACAAAAAGATGCTCCTCTCCTGAAAAATTTATACCA
 
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rJMSF020G22+          CGAAGTTTTACTTAAAGATAGGAATGCCAAATTCAGGGGCTAAGCACAGACAAATAGTAA
rJMSF008O01+          CGAAGTTTTACTTAAAGATA-GAATGCCAAATTCAGGGGCTAAGCACAGACAAATAGTAA
                      ____________________________________________________________
consensus             CGAAGTTTTACTTAAAGATAGGAATGCCAAATTCAGGGGCTAAGCACAGACAAATAGTAA
 
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rJMSF020G22+          GTTCTCTGAATGGTTTGCATCAAACGCCCCTTCAAGTGGTGGTTGGTTCCATGCTAATTG
rJMSF008O01+          GTTCTCTGAATGGTTTGCATCAAACGCCCCTTCAAGTGGTGGTTGGTTCCATGCTAATTG
                      ____________________________________________________________
consensus             GTTCTCTGAATGGTTTGCATCAAACGCCCCTTCAAGTGGTGGTTGGTTCCATGCTAATTG
 
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rJMSF020G22+          CAACAGACATGCTTCTGAATTCTCATCCATTTGGTGAATCCATAATTCTCATTGTGAAAG
rJMSF008O01+          CAACAGACATGCTTCTGAATTCTCATCCATTTGGTGAATCCATAATTCTCATTGTGAAAG
                      ____________________________________________________________
consensus             CAACAGACATGCTTCTGAATTCTCATCCATTTGGTGAATCCATAATTCTCATTGTGAAAG
 
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rJMSF020G22+          GAAATCAGAGCTTAGGATTTCAAGGTCTAATTGTGAATAAGCGGATCAACTGGGAGTCTA
rJMSF008O01+          GAAATCAGAGCTTAGGATTTCAAGGTCTAATTGTGAATAAGCGGATCAACTGGGAGTCTA
                      ____________________________________________________________
consensus             GAAATCAGAGCTTAGGATTTCAAGGTCTAATTGTGAATAAGCGGATCAACTGGGAGTCTA
 
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rJMSF020G22+          TAGATGAAGTCGAGGAAGGTTTAGAATTTCTTAAGGCAACTCCTCTATCTTTTGGTGGTC
rJMSF008O01+          TAGATGAAGTCGAGGAAGGTTTAGAATTTCTTAAGGCAACTCCTCTATCTTTTGGTGGTC
                      ____________________________________________________________
consensus             TAGATGAAGTCGAGGAAGGTTTAGAATTTCTTAAGGCAACTCCTCTATCTTTTGGTGGTC
 
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rJMSF020G22+          CTGTACTCAAACGCGGAATGCCTCTTGTGGCTTTGTCAAAAAGAATTATTGAAGATCATA
rJMSF008O01+          CTGTACTCAAACGCGGAATGCCTCTTGTGGCTTTGTCAAAAAGAATTATTGAAGATCATA
                      ____________________________________________________________
consensus             CTGTACTCAAACGCGGAATGCCTCTTGTGGCTTTGTCAAAAAGAATTATTGAAGATCATA
 
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rJMSF020G22+          ATCCGGAAGTCCTTCCAAACATCTACTTTCTTGATCAAGAAGCTACACTCCGTTTACTAG
rJMSF008O01+          ATCCGGAAGTCCTTCCAAACATCTACTTTCTTGATCAAGAAGCTACACTCCGTTTACTAG
                      ____________________________________________________________
consensus             ATCCGGAAGTCCTTCCAAACATCTACTTTCTTGATCAAGAAGCTACACTCCGTTTACTAG
 
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rJMSF020G22+          ATGAAGCGAAAGCGGGAAACCAATCTGTCCATGATGTTTGGTTCTTCTTGGGATTTTCAA
rJMSF008O01+          ATGAAGCGAAAGCGGGAAACCAATCTGTCCATGATGTTTGGTTCTTCTTGGGATTTTCAA
                      ____________________________________________________________
consensus             ATGAAGCGAAAGCGGGAAACCAATCTGTCCATGATGTTTGGTTCTTCTTGGGATTTTCAA
 
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rJMSF020G22+          GATGGGATGGGGACCAACTAGTTAACGAGATTATTGAAGGAGCTTGGACTCTGAGCAAAG
rJMSF008O01+          GATGGGATGGGGACCAACTAGTTAACGAGATTATTGAAGGAGCTTGGACTCTGAGCAAAG
                      ____________________________________________________________
consensus             GATGGGATGGGGACCAACTAGTTAACGAGATTATTGAAGGAGCTTGGACTCTGAGCAAAG
 
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rJMSF020G22+          GTACCGAGGAGAAACTAGGTTGGCCTCTAATGTAAACTAAACCATCAAAAGTAGGGTGAT
rJMSF008O01+          GTACCGAGGAGAAACTAGGTTGGCCTCTAATGTAAACTAAACCATCAAAAGTAGGGTGAT
                      ____________________________________________________________
consensus             GTACCGAGGAGAAACTAGGTTGGCCTCTAATGTAAACTAAACCATCAAAAGTAGGGTGAT
 
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rJMSF020G22+          CAAAGATTCAAGACCCATGTAGGATTAGCATAGCCTNCAGTATAACCACTTGTATCACAG
rJMSF008O01+          CAAAGATTCAAGACCCATGTAGGATTAGCATAGCCTACAGTATAACCACTTGTATCACAG
                      ____________________________________________________________
consensus             CAAAGATTCAAGACCCATGTAGGATTAGCATAGCCTACAGTATAACCACTTGTATCACAG
 
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rJMSF020G22+          CTGTACATAAGATTT                                             
rJMSF008O01+          CTGTACATAAGATTTTTTTTCTCTCTCACATGATTAAGTGATAACAGCATGTATGATGCT
                      ____________________________________________________________
consensus             CTGTACATAAGATTTTTTTTCTCTCTCACATGATTAAGTGATAACAGCATGTATGATGCT