| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF008F02 | Sequence | 375 | 000849 (5) | ref|XP_004171137.1| | 5e-19 | PREDICTED: CBL-interacting serine/threonine-protein kinase 3-like, partial [Cuc | 761 | 004193 (4) | ref|XP_002532581.1| | 4e-98 | CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis] gb |
| JMSF034B19 | Sequence | 561 | 000849 (5) | ref|XP_007015396.1| | 2e-62 | CBL-interacting serine/threonine-protein kinase 3 isoform 2 [Theobroma cacao] g | 746 | 004193 (4) | ref|XP_002532581.1| | 2e-96 | CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis] gb |
| JMSF036A02 | Sequence | 693 | 000849 (5) | gb|KDO66334.1| | 5e-132 | hypothetical protein CISIN_1g013407mg [Citrus sinensis] | 707 | 004193 (4) | ref|XP_004228494.1| | 6e-115 | PREDICTED: CBL-interacting serine/threonine-protein kinase 3-like [Solanum lyco |
| JMSF039N16 | Sequence | 621 | 000849 (5) | gb|KDO66334.1| | 6e-83 | hypothetical protein CISIN_1g013407mg [Citrus sinensis] | 861 | 004193 (4) | ref|XP_007015397.1| | 5e-133 | CBL-interacting protein kinase 3 isoform 3 [Theobroma cacao] gb|EOY33016.1| CBL- |
This contig is upended
. : . : . : . : . : . :
rJMSF039N16+ GCGCTGAGTTTACTTGCCCGCCCTGGATCTCCTTCAGCGCCATGAAGTTAATTACTC
____________________________________________________________
consensus GCGCTGAGTTTACTTGCCCGCCCTGGATCTCCTTCAGCGCCATGAAGTTAATTACTC
. : . : . : . : . : . :
rJMSF036A02+ TGGAAGATGAAT
rJMSF039N16+ GAATTTNGGATCCAAACCCTGTGACTCGAATTACCATTCCTGAGATATTGGAAGATGAGT
____________________________________________________________
consensus GAATTTNGGATCCAAACCCTGTGACTCGAATTACCATTCCTGAGATATTGGAAGATGAGT
. : . : . : . : . : . :
rJMSF036A02+ GGTTTAAGAAAGATTACAAACCGCCTGTTTTTGACGAGAAAGAAGATGCAAACCTCGACG
rJMSF039N16+ GGTTTAAGAAAGACTATAAACCTGCCGTTTTTTATGAGAAAGAAGACACAAACCTGGATG
rJMSF034B19+ GAGAAAGAAGACNCAAACCTGGATG
rJMSF008F02+ GAGAAAGAAGACACAAACCTGGATG
____________________________________________________________
consensus GGTTTAAGAAAGATTATAAACCTGCTGTTTTTTATGAGAAAGAAGACACAAACCTGGATG
. : . : . : . : . : . :
rJMSF036A02+ ATGTTGAAGCTGTTTTTCAGGATTCTGAAGAGCATCATGTAACAGAGAAAAAGGAAGAGC
rJMSF039N16+ ATGTGGAAGCTGTTTTTAAGGATTCTCAAGAGCATCATGTTACGGAGAAAAAGGAAGAGC
rJMSF034B19+ ATGTGGAAGCTGTTTTTAAGGATTCTCAAGAGCATCATGTTACGGAGAAAAAGGAAGAGC
rJMSF008F02+ ATGTGGAAGCTGTTTTTAAGGATTCTCAAGAGCATCATGTTACGGAGAAAAAGGAAGAGC
____________________________________________________________
consensus ATGTGGAAGCTGTTTTTAAGGATTCTCAAGAGCATCATGTTACGGAGAAAAAGGAAGAGC
. : . : . : . : . : . :
rJMSF036A02+ AGCCAACTTCTATGAATGCATTCGAGTTAATTTCTATGTCTAAAGGACTCAACCTCGGGA
rJMSF039N16+ AGCCAACTGCAATGAATGCATTCGAGTTAATTTCTATGTCAAAAGGGCTCGATCTGGGAA
rJMSF034B19+ AGCCAACTGCAATGAATGCATTCGAGTTAATTTCTATGTCAAAAGGGCTCGATCTTGGAA
rJMSF008F02+ AGCCAACTGCAATGAATGCATTCGAGTTAATTTCTATGTCAAAAGGGCTCGATCTTGGAA
____________________________________________________________
consensus AGCCAACTGCAATGAATGCATTCGAGTTAATTTCTATGTCAAAAGGGCTCGATCTTGGAA
. : . : . : . : . : . :
rJMSF036A02+ ATCTATTCGATGAGCAGGGATTCAAGAGAGAAACAAGGTTCACGTCAAAACGCCCAGCCA
rJMSF039N16+ ATCTCTTTGATGAAAAGGGATTCAAGAGGGAAACAAGGTTCACTTCTAAATGCCCCGCAA
rJMSF034B19+ ATCTCTTTGATGAAAAGGGATTCAAGAGGGAAACAAGGTTCACTTCTAAATGCCCCGCAA
rJMSF008F02+ ATCTCTTTGATGAAAAGGGATTCAAGAGGGAAACAAGGTTCACTTCTAAATGCCCCGCAA
____________________________________________________________
consensus ATCTCTTTGATGAAAAGGGATTCAAGAGGGAAACAAGGTTCACTTCTAAATGCCCCGCAA
. : . : . : . : . : . :
rJMSF036A02+ ACGAGATAATCAGCAAGATTGAAGAAGCTGCAAAGCCCCTCGGCTTTGATGTTCAGAAAA
rJMSF039N16+ ATGAGATAATCACTAAGATAGAAGAAGCTGCAAAGCCCCTCGGTTTTGATGTTCGAAAGA
rJMSF034B19+ ATGAGATAATCACTAAGATAGAAGAAGCTGCAAAGCCCCTCGGTTTTGATGTTCGAAAGA
rJMSF008F02+ ATGAGATAATCACTAAGATAGAAGAAGCTGCAAAGCCCCTCGGTTTTGATGTTCGAAAGA
____________________________________________________________
consensus ATGAGATAATCACTAAGATAGAAGAAGCTGCAAAGCCCCTCGGTTTTGATGTTCGAAAGA
. : . : . : . : . : . :
rJMSF036A02+ AGAACTACAAGATGCGGTTGGAAAACATAAAAGCGGGAAGAAAAGGAAACCTTAATGTTG
rJMSF039N16+ AGAATTACAAGATGCGGCTGGAAAACATTAAAGCGGGAAGAAAAGGAAACCTTAATGTTT
rJMSF034B19+ AGAATTACAAGATGCGGCTGGAAAACATTAAAGCGGGAAGAAAAGGAAACCTTAATGTTT
rJMSF008F02+ AGAATTACAAGATGCGGCTGGAAAACATTAAAGCGGGAAGAAAAGGAAACCTTAATGTTT
____________________________________________________________
consensus AGAATTACAAGATGCGGCTGGAAAACATTAAAGCGGGAAGAAAAGGAAACCTTAATGTTT
. : . : . : . : . : . :
rJMSF036A02+ CAACCGAGGTATTCCAAGTTGCTCCTTCTCTGCATATGGTTGAAGTGCGAAAAGCAAAAG
rJMSF039N16+ CAACTGAGGTATTCCAAGTTGCCCCCTCTCTTCACCTGGTCGAGGTGCGAAAGGCTAAAG
rJMSF034B19+ CAACTGAGGTATTCCAAGTTGCCCCCTCTCTTCACCTGGTCGAGGTGCGAAAGGCTAAAG
rJMSF008F02+ CAACTGAGGTATTCCAAGTTGCCCCCTCTCTTCACCTGGTCGAGGTGCGAAAGGCTAAAG
____________________________________________________________
consensus CAACTGAGGTATTCCAAGTTGCCCCCTCTCTTCACCTGGTCGAGGTGCGAAAGGCTAAAG
. : . : . : . : . : . :
rJMSF036A02+ GGGACACATTGGAATTCCACAAGTTCTACAAAAATCTTTCAACCTGCCTCGATGATGTGG
rJMSF039N16+ GAGACACGTTGGAATTCCACAAGTTTTACAAGAACCTTTCTACTTGCCTTGAAGATGTAG
rJMSF034B19+ GAGACACGTTGGAATTCCACAAGTTTTACAAGAACCTTTCTACTTGCCTTGAAGATGTAG
rJMSF008F02+ GAGACACGTTGGAATTCCACAAGTTTTACAAGAACCTTTCTACTTGCCTTGAAGATGTAG
____________________________________________________________
consensus GAGACACGTTGGAATTCCACAAGTTTTACAAGAACCTTTCTACTTGCCTTGAAGATGTAG
. : . : . : . : . : . :
rJMSF036A02+ TATGGCGAACCGAAGAAGACATGCAAGAAACAA
rJMSF039N16+ TTTGGAGAACTGAAGAAGATATGCAAGAAACAACATAGAATTTGCCAACCATGATTGCTA
rJMSF034B19+ TTTGGAGAACTGAAGAAGATATGCAAGAAACAACATAGAATTTGCCAACCATGATTGCTA
rJMSF008F02+ TTTGGAGAACTGAAGAAGATATGCAAGAAACAACATAGAATTTGCCAACCATGATTGCTA
____________________________________________________________
consensus TTTGGAGAACTGAAGAAGATATGCAAGAAACAACATAGAATTTGCCAACCATGATTGCTA
. : . : . : . : . : . :
rJMSF039N16+ CCCATTTGTTTTCAGGCCTTGGTCTTCATTCTCTTATGTTCTATATTTATTTATTTTTGG
rJMSF034B19+ CCCATTTGTTTTCAGGCCTTGGTCTTCATTCTCTTATGTTCTATATTTATTTATTTTTGG
rJMSF008F02+ CCCATTTGTTTTCAGGCCTTGGTCTTCATTCTCTTATGTTCTATATTTATTTATTTTTGG
____________________________________________________________
consensus CCCATTTGTTTTCAGGCCTTGGTCTTCATTCTCTTATGTTCTATATTTATTTATTTTTGG
. : . : . : . : . : . :
rJMSF039N16+ TCTTTTATGGGACCTTTTTCTCCCATGAGAGAATTAGGAAATTCACTTTGTTGTTCCTTT
rJMSF034B19+ TCTTTTATGGGACCTTTTTCTCCCATGAGAGAATTAGGAAATTCACTTTGTTGTTCCTTT
rJMSF008F02+ TCTTTTATGGGACCTTTTTCTCCCATGAGAGAATTAGGAAATTCACTTTGTTGTTCCTTT
____________________________________________________________
consensus TCTTTTATGGGACCTTTTTCTCCCATGAGAGAATTAGGAAATTCACTTTGTTGTTCCTTT
. : . : . : . : . : . :
rJMSF039N16+ ATTATAGGCAGTGGAAAGCAGAGATGGCTCCTGTAGTCCTCCTGTTGAAGTGTTGATGTG
rJMSF034B19+ ATTATAGGCAGTGGAAAGCAGAGATGGCTCCTGTAGTCCTCCTGTTGAAGTGTTGATGTG
rJMSF008F02+ ATTATAGGCAGTGGAAAGCAGAGATGGCTCCTGTAGTCCTCCTGTTGAAGTGTTGATGTG
____________________________________________________________
consensus ATTATAGGCAGTGGAAAGCAGAGATGGCTCCTGTAGTCCTCCTGTTGAAGTGTTGATGTG
. : . : . : . : . : . :
rJMSF039N16+ AATTTTGTATA
rJMSF034B19+ AATTTTGTATACTGTGTATGCTTGTTAATGTGATTGATTGATTCAGTGATGCAAATGCAA
rJMSF008F02+ AATTTTGTATACTGTGTATGCTTGTTAATGTGATTGATTGATTCAGTGATGCAAATGCAA
____________________________________________________________
consensus AATTTTGTATACTGTGTATGCTTGTTAATGTGATTGATTGATTCAGTGATGCAAATGCAA