Contig 004192:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008E04Sequence360001724 (7)ref|XP_004242507.1|2e-11PREDICTED: uncharacterized protein At5g39865 [Solanum lycopersicum]751004192 (2)ref|XP_006350855.1|2e-70PREDICTED: uncharacterized protein At3g28850-like [Solanum tuberosum]
JMSF010N17Sequence258001724 (7)695004192 (2)ref|XP_006350855.1|4e-60PREDICTED: uncharacterized protein At3g28850-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF008E04+                                       ACGCGCCGATCTCGCTCCCGGGAGCCGAGAA
                      ____________________________________________________________
consensus                                          ACGCGCCGATCTCGCTCCCGGGAGCCGAGAA
 
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rJMSF010N17+                                  CCTCCGCGTGGTCCGCCGGACGTTCGAGGATTGCCG
rJMSF008E04+          ACGGATAGTGGTGTACTTCACGAGCCTCCGCGTGGTCCGCCGGACGTTCGAGGATTGCCG
                      ____________________________________________________________
consensus             ACGGATAGTGGTGTACTTCACGAGCCTCCGCGTGGTCCGCCGGACGTTCGAGGATTGCCG
 
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rJMSF010N17+          GGATGTTCTGTCGGTCCTGCGGAGCTTCCGCGTGTCGATCGACGAGCGGGATTTGTCGGC
rJMSF008E04+          GGATGTTCTGTCGGTCCTGCGGAGCTTCCGCGTGTCGATCGACGAGCGGGATTTGTCGGC
                      ____________________________________________________________
consensus             GGATGTTCTGTCGGTCCTGCGGAGCTTCCGCGTGTCGATCGACGAGCGGGATTTGTCGGC
 
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rJMSF010N17+          CGACGCCGGATTCAGGGAGGAGCTGCAGGGGATCCTGGGGGTGCGTGAAAGGACGAAACT
rJMSF008E04+          CGACGCCGGATTCAGGGAGGAGCTGCAGGGGATCCTGGGGGTGCGTGAAAGGACGAAACT
                      ____________________________________________________________
consensus             CGACGCCGGATTCAGGGAGGAGCTGCAGGGGATCCTGGGGGTGCGTGAAAGGACGAAACT
 
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rJMSF010N17+          AACCCTGCCGCAGGTCTTCATCGGCGGGAAGTACATTGGCGGCGCGGAGGAGATCCGGCG
rJMSF008E04+          AGCCCTGCCGCAGGTCTTCATCGGCGGGAAGTACATTGGCGGCGCGGAGGAGATCCGGCG
                      ____________________________________________________________
consensus             AGCCCTGCCGCAGGTCTTCATCGGCGGGAAGTACATTGGCGGCGCGGAGGAGATCCGGCG
 
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rJMSF010N17+          CCTCCACGAGTCCGGCGAGCTGAAGAAGTGCGTGGAAGGGCTGCCGCCGGCCAACCCCGA
rJMSF008E04+          CCTCCACGAGTCCGGCGAGCTGAAGAAGTGCGTGGAAGGGCTGCCGCCGGCCAACCCCGA
                      ____________________________________________________________
consensus             CCTCCACGAGTCCGGCGAGCTGAAGAAGTGCGTGGAAGGGCTGCCGCCGGCCAACCCCGA
 
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rJMSF010N17+          CACGTGCGAGCTNTGCGACGGCCACCGGTATATCCTCTGCGACGAGTGTGACGTAAGCGA
rJMSF008E04+          CACGTGCGAGCTCTGCGACGGCCACCGGTATATCCTCTGCGACGAGTGTGACGTAAGCGA
                      ____________________________________________________________
consensus             CACGTGCGAGCTCTGCGACGGCCACCGGTATATCCTCTGCGACGAGTGTGACGTAAGCGA
 
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rJMSF010N17+          CGGCGAAAAGTGCGGCTTCAGGACTTGTACGGCGTGCAGTCAAAGCGGTCTCATCAACTG
rJMSF008E04+          CGGCGAAAAGTGCGGCTTCAGGACTTGTACGGCGTGCAGTCAAAGCGGTCTCATCAACTG
                      ____________________________________________________________
consensus             CGGCGAAAAGTGCGGCTTCAGGACTTGTACGGCGTGCAGTCAAAGCGGTCTCATCAACTG
 
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rJMSF010N17+          CCCTTCTTGTTCCCGTGCGCCCCTCTGAACCGTGCGATTAGATTTTGGCTCTAGCTAGGA
rJMSF008E04+          CCCTTCTTGTTCCCGTGCGCCCCTCTGAACCGTGCGATTAGATTTTGGCTCTAGCTAGGA
                      ____________________________________________________________
consensus             CCCTTCTTGTTCCCGTGCGCCCCTCTGAACCGTGCGATTAGATTTTGGCTCTAGCTAGGA
 
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rJMSF010N17+          TGACGTCATCAATCATGAGGAGGTGAAACAAAAAAAATATTTGCACTCCCCGCCCCCTCA
rJMSF008E04+          TGACGTCATCAATCATGAGGAGGTGAAACAAAAAAAATATTTGCACTCCCCGCCCCCTCA
                      ____________________________________________________________
consensus             TGACGTCATCAATCATGAGGAGGTGAAACAAAAAAAATATTTGCACTCCCCGCCCCCTCA
 
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rJMSF010N17+          TTTTATGTCATTTTGTAGTCTGGTCCTTTTATTTTTTTGGGTTTCTCAATTTGAAAGTGT
rJMSF008E04+          TTTTATGTCATTTTGTAGTCTGGTCCTTTTATTTTTTTGGGTTTCTCAATTTGAAAGTGT
                      ____________________________________________________________
consensus             TTTTATGTCATTTTGTAGTCTGGTCCTTTTATTTTTTTGGGTTTCTCAATTTGAAAGTGT
 
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rJMSF010N17+          AACTTAGTTTGTTCTGTAAATGGGTGAATGGAGTTTTTAGAATTGTAGGACCATAACAGT
rJMSF008E04+          AACTTAGTTTGTTCTGTAAATGGGTGAATGGAGTTTTTAGAATTGTAGGACCATAACAGT
                      ____________________________________________________________
consensus             AACTTAGTTTGTTCTGTAAATGGGTGAATGGAGTTTTTAGAATTGTAGGACCATAACAGT
 
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rJMSF010N17+          CTGTATTCTTGATTTGGGTGGTCATGAATCAAGTGAAAACACGAGAC             
rJMSF008E04+          CTGTATTCTTGATTTGGGTGGTCATGAATCAAGTGAAAACACGAGACCACGTGATTATGT
                      ____________________________________________________________
consensus             CTGTATTCTTGATTTGGGTGGTCATGAATCAAGTGAAAACACGAGACCACGTGATTATGT