Contig 004191:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008D04Sequence310009081 (4)ref|XP_009613901.1|2e-08PREDICTED: probable serine/threonine-protein kinase At1g18390 [Nicotiana toment771004191 (3)ref|XP_006344307.1|2e-112PREDICTED: probable receptor-like protein kinase At5g39020-like [Solanum tubero
JMSF019H14Sequence566009081 (4)ref|XP_009600764.1|4e-25PREDICTED: probable serine/threonine-protein kinase At1g18390 [Nicotiana toment823004191 (3)ref|XP_006344307.1|2e-140PREDICTED: probable receptor-like protein kinase At5g39020-like [Solanum tubero
JMSF031D08Sequence644009081 (4)ref|XP_009600764.1|3e-24PREDICTED: probable serine/threonine-protein kinase At1g18390 [Nicotiana toment744004191 (3)ref|XP_006344307.1|2e-123PREDICTED: probable receptor-like protein kinase At5g39020-like [Solanum tubero

Alignment

This contig is upended


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rJMSF019H14+                 CAAAGGTGGTGGGAAGAGNTTATCAATGAAGTAGCCAGCNTTAGCAGAACTTC
                      ____________________________________________________________
consensus                    CAAAGGTGGTGGGAAGAGNTTATCAATGAAGTAGCCAGCNTTAGCAGAACTTC
 
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rJMSF019H14+          TCATGNTAATATTGTATCACTGTTAGGATTCTGTTTCGAGGGTGACAAAAGAGCGTTGCT
rJMSF031D08+                                                    TGACAAAAGAGCGTTGCT
                      ____________________________________________________________
consensus             TCATGNTAATATTGTATCACTGTTAGGATTCTGTTTCGAGGGTGACAAAAGAGCGTTGCT
 
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rJMSF019H14+          CTATGAATTCATGCCTAACGGATCACTTGAAAAGTTCATTTATGATGGGAGAGTCAAGAT
rJMSF031D08+          CTATGAATTCATGCCTAACGGATCACTTGAAAAGTTCATTTATGATGGGAGAGTCAAGAT
rJMSF008D04+                                     TGAAAAGTTCATTTATGATGGGAGAGTCAAGAT
                      ____________________________________________________________
consensus             CTATGAATTCATGCCTAACGGATCACTTGAAAAGTTCATTTATGATGGGAGAGTCAAGAT
 
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rJMSF019H14+          AGACCGTCAATTAGGATGGTCAACCTTGTATAAAATAGCAATTGGCATTGCTAGGGGACT
rJMSF031D08+          AGACCGTCAATTAGGATGGTCAACCTTGTATAAAATAGCAATTGGCATTGCTAGGGGACT
rJMSF008D04+          AGACCGTCAATTAGGATGGTCAACCTTGTATAAAATAGCAATTGGCATTGCTAGGGGACT
                      ____________________________________________________________
consensus             AGACCGTCAATTAGGATGGTCAACCTTGTATAAAATAGCAATTGGCATTGCTAGGGGACT
 
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rJMSF019H14+          AGAATACCTACACCGTGGCTGTAGAACACAAATCCTACACTTTGATATAAAGCCACATAA
rJMSF031D08+          AGAATACCTACACCGTGGCTGTAGAACACAAATCCTACACTTTGATATAAAGCCACATAA
rJMSF008D04+          AGAATACCTACACCGTGGCTGTAGAACACAAATCCTACACTTTGATATAAAGCCACATAA
                      ____________________________________________________________
consensus             AGAATACCTACACCGTGGCTGTAGAACACAAATCCTACACTTTGATATAAAGCCACATAA
 
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rJMSF019H14+          TATTCTTCTGGACGAAGATTTTTGTCCAAAAATCTCAGACTTCGGTCTTGCAAAACTGCA
rJMSF031D08+          TATTCTTCTGGACGAAGATTTTTGTCCAAAAATCTCAGACTTCGGTCTTGCAAAACTGCA
rJMSF008D04+          TATTCTTCTGGACGAAGATTTTTGTCCAAAAATCTCAGACTTCGGTCTTGCAAAACTGCA
                      ____________________________________________________________
consensus             TATTCTTCTGGACGAAGATTTTTGTCCAAAAATCTCAGACTTCGGTCTTGCAAAACTGCA
 
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rJMSF019H14+          CACAACAAAAGAGAGCTTTGTGTCGATAACCGGTGCTCGGGGAACAATTGGATATGTTGC
rJMSF031D08+          CACAACAAAAGAGAGCTTTGTGTCGATAACCGGTGCTCGGGGAACAATTGGATATGTTGC
rJMSF008D04+          CACAACAAAAGAGAGCTTTGTGTCGATAACCGGTGCTCGGGGAACAATTGGATATGTTGC
                      ____________________________________________________________
consensus             CACAACAAAAGAGAGCTTTGTGTCGATAACCGGTGCTCGGGGAACAATTGGATATGTTGC
 
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rJMSF019H14+          TCCAGAAGTTGCATGCAGACACTTTGGAGTGGTCTCTCATAAGGCTGACGTGTATAGCTT
rJMSF031D08+          TCCAGAAGTTGCATGCAGACACTTTGGAGTGGTCTCTCATAAGGCTGACGTGTATAGCTT
rJMSF008D04+          TCCAGAAGTTGCATGCAGACACTTTGGAGTGGTCTCTCATAAGGCTGACGTGTATAGCTT
                      ____________________________________________________________
consensus             TCCAGAAGTTGCATGCAGACACTTTGGAGTGGTCTCTCATAAGGCTGACGTGTATAGCTT
 
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rJMSF019H14+          TGGGATGATGGTATTAGAGATGGTCAGTGGCAGAAAGAATGTTGAGAAGGATGTAGATCG
rJMSF031D08+          TGGGATGATGGTATTAGAGATGGTCAGTGGCAGAAAGAATGTTGAGAAGGATGTAGATCG
rJMSF008D04+          TGGGATGATGGTATTAGAGATGGTCAGTGGCAGAAAGAATGTTGAGAAGGATGTAGATCG
                      ____________________________________________________________
consensus             TGGGATGATGGTATTAGAGATGGTCAGTGGCAGAAAGAATGTTGAGAAGGATGTAGATCG
 
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rJMSF019H14+          AAGTAGCGAAATCTATTTTCCGCACTGGATCTACAGTCGGATTGAACTTGATAAAGAGTT
rJMSF031D08+          AAGTAGCGAAATCTATTTTCCGCACTGGATCTACAGTCGGATTGAACTTGATAAAGAGTT
rJMSF008D04+          AAGTAGCGAAATCTATTTTCCGCACTGGATCTACAGTCGGATTGAACTTGATAAAGAGTT
                      ____________________________________________________________
consensus             AAGTAGCGAAATCTATTTTCCGCACTGGATCTACAGTCGGATTGAACTTGATAAAGAGTT
 
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rJMSF019H14+          GGGATTGAAAGGAATTACAAATGAAGAGGATAAAGAATATGCAAGAAAGATGATCATGGT
rJMSF031D08+          GGGATTGAAAGGAATTACAAATGAAGAGGATAAAGAATATGCAAGAAAGATGATCATGGT
rJMSF008D04+          GGGATTGAAAGGAATTACAAATGAAGAGGATAAAGAATATGCAAGAAAGATGATCATGGT
                      ____________________________________________________________
consensus             GGGATTGAAAGGAATTACAAATGAAGAGGATAAAGAATATGCAAGAAAGATGATCATGGT
 
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rJMSF019H14+          TGGTTTGTGGTGCATCCATGTTGATCCTTCAATCAGGCCATCAATAAGTAAGGCATTGGA
rJMSF031D08+          TGGTTTGTGGTGCATCCATGTTGATCCTTCAATCAGGCCATCAATAAGTAAGGCATTGGA
rJMSF008D04+          TGGTTTGTGGTGCATCCATGTTGATCCTTCAATCAGGCCATCAATAAGTAAGGCATTGGA
                      ____________________________________________________________
consensus             TGGTTTGTGGTGCATCCATGTTGATCCTTCAATCAGGCCATCAATAAGTAAGGCATTGGA
 
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rJMSF019H14+          AATGTTGGAAAACAGTGTGAACTCTTTGCCATTTCCTCCAAAGCCCTACATGTATTCTTC
rJMSF031D08+          AATGTTGGAAAACAGTGTGAACTCTTTGCCATTTCCTCCAAAGCCCTACATGTATTCTTC
rJMSF008D04+          AATGTTGGAAAACAGTGTGAACTCTTTGCCATTTCCTCCAAAGCCCTACATGTATTCTTC
                      ____________________________________________________________
consensus             AATGTTGGAAAACAGTGTGAACTCTTTGCCATTTCCTCCAAAGCCCTACATGTATTCTTC
 
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rJMSF019H14+          TGCATCAACTGAAGCAAATTCATCTACTATACATTAATATAATCCTAGCA          
rJMSF031D08+          TGCATCAACTGAAGCAAATTCATCTACTATACATTAATATAATCCTAGCATTTTCTTTCA
rJMSF008D04+          TGCATCAACTGAAGCAAATTCATCTACTATACATTAATATAATCCTAGCATTTTCTTTCA
                      ____________________________________________________________
consensus             TGCATCAACTGAAGCAAATTCATCTACTATACATTAATATAATCCTAGCATTTTCTTTCA
 
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rJMSF031D08+          ATTAGT                                                      
rJMSF008D04+          ATTAGTTTTTAACTATGTAAAGAAAAGGTGCAAAATATATTTGTGTTTTGAGATTTTATT
                      ____________________________________________________________
consensus             ATTAGTTTTTAACTATGTAAAGAAAAGGTGCAAAATATATTTGTGTTTTGAGATTTTATT