Contig 004186:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007L04Sequence563004186 (7)ref|XP_010257716.1|2e-22PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera]707004186 (7)ref|XP_010257716.1|2e-67PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera]
JMFF024K20Sequence489004186 (7)ref|XP_010257716.1|4e-21PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera]722004186 (7)ref|XP_010257716.1|3e-69PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera]
JMFF042N12Sequence645004186 (7)ref|XP_010257716.1|3e-33PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera]603004186 (7)ref|XP_009595427.1|4e-62PREDICTED: uncharacterized protein At5g19025-like [Nicotiana tomentosiformis]
JMSF006D10Sequence268023118411004186 (7)ref|XP_009595427.1|9e-51PREDICTED: uncharacterized protein At5g19025-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF042N12-                                      GGCACCTATATAAATTAACTGCATCCCAATATA
                      ____________________________________________________________
consensus                                        GGCACCTATATAAATTAACTGCATCCCAATATA
 
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JMFF007L04-                CTCTCTGTCTCCGTCCCTGTTCTCATCTCTTCAGAATCCGATTATCATCTCTAGA
JMFF024K20-                CTCTCTGTCTCCGTCCCTGTTCTCATCTCTTCAGAATCCGATTATCATCTCTAGA
JMFF042N12-           CGTGTCTCTCTGTCTCCGTCCCTGTTCTCATCTCTTCAGAATCCGATTATCATCTCTAGA
                      ____________________________________________________________
consensus             CGTGTCTCTCTGTCTCCGTCCCTGTTCTCATCTCTTCAGAATCCGATTATCATCTCTAGA
 
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JMFF007L04-           ATCCAATTCCCAGTATTCCCAATCGAGAATCCGCGGAATTTGATTGATAAACGAAAGCGG
JMFF024K20-           ATCCAATTCCCAGTATTCCCAATCGAGAATCCGCGGAATTTGATTGATAAACGAAAGCGG
JMFF042N12-           ATCCAATTCCCAGTATTCCCAATCGAGAATCCGCGGAATTTGATTGATAAACGAAAGCGG
                      ____________________________________________________________
consensus             ATCCAATTCCCAGTATTCCCAATCGAGAATCCGCGGAATTTGATTGATAAACGAAAGCGG
 
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JMFF007L04-           GGCGGGGGAGGCGAGAAGAAATGAGGTTACCCATGGTGGATTGCCGGAGTTTGATCGAGT
JMFF024K20-           GGCGGGGGAGGCGAGAAGAAATGAGGTTACCCATGGTGGATTGCCGGAGTTTGATCGAGT
JMFF042N12-           GGCGGGGGAGGCGAGAAGAAATGAGGTTACCCATGGTGGATTGCCGGAGTTTGATCGAGT
                      ____________________________________________________________
consensus             GGCGGGGGAGGCGAGAAGAAATGAGGTTACCCATGGTGGATTGCCGGAGTTTGATCGAGT
 
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JMFF007L04-           TTTGCCGGGCGTTCGAGCCGCGCAGGAACCGGAACCGATTCAATT-CCAATTCCAATTCC
JMFF024K20-           TTTGCCGGGCGTTCGAGCCGCGCAGGAACCGGAACCGATTCAATT-CCAATTCCAATTCC
JMFF042N12-           TTTGCCGGGCGTTCGAGCCGCGCAGGAACCGGAACCGATTCAATT-CCAATTCCAATTCC
rJMFF024K20+          TTTGCCGGGCGTTCGAGCCGCGCAGGANCCGGAACCGATTCAATTCCCAATTCCAATTCC
rJMFF007L04+                                                      TTCCAATTCCAATTCC
                      ____________________________________________________________
consensus             TTTGCCGGGCGTTCGAGCCGCGCAGGAACCGGAACCGATTCAATT-CCAATTCCAATTCC
 
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JMFF007L04-           CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
JMFF024K20-           CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
JMFF042N12-           CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
rJMFF024K20+          CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
rJMFF007L04+          CAGAGCAAGAACAGGCTGTCCNGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
                      ____________________________________________________________
consensus             CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
 
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JMFF007L04-           CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
JMFF024K20-           CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
JMFF042N12-           CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
rJMFF024K20+          CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
rJMFF007L04+          CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
rJMFF042N12+                                                         ACTGATCCTGGTT
                      ____________________________________________________________
consensus             CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
 
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JMFF007L04-           TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
JMFF024K20-           TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
JMFF042N12-           TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
rJMFF024K20+          TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
rJMFF007L04+          TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
rJMFF042N12+          TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
                      ____________________________________________________________
consensus             TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
 
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JMFF007L04-           CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
JMFF024K20-           CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
JMFF042N12-           CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
rJMFF024K20+          CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
rJMFF007L04+          CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
rJMFF042N12+          CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
                      ____________________________________________________________
consensus             CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
 
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JMFF007L04-           GGCCTCCTGGCGACGCCTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
JMFF024K20-           GGCCTCCTGGCGACG                                             
JMFF042N12-           GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
rJMFF024K20+          GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
rJMFF007L04+          GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
rJMFF042N12+          GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
                      ____________________________________________________________
consensus             GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
 
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JMFF007L04-           TCTGCGCTCCCGGCGATGCGGGAACCCCA                               
JMFF042N12-           TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
rJMFF024K20+          TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
rJMFF007L04+          TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
rJMFF042N12+          TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
rJMSF006D10+                          TGCGGGAATCCCAAGTGTCAGGGCTTGAGGAAAGCGGTGGAGTT
                      ____________________________________________________________
consensus             TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
 
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JMFF042N12-           CGATATCCAGCTCG                                              
rJMFF024K20+          CGATATCCAGCTCGAGTCCGAGGAGTGCCTCAAGTATTTGCCGCCCGACGCGAGCGTCAA
rJMFF007L04+          CGATATCCAGCTCGAGTCCGAGGAGTGCCTCAAGTATTTGCCGCCCGACGCGAGCGTCAA
rJMFF042N12+          CGATATCCAGCTCGAGTCCGAGGAGTGCCTCAAGTATTTGCCGCCCGACGCGAGCGTCAA
rJMSF006D10+          TGATATCCAGCTCGAGTCGGAGGAGTGCCTCAAGTATTTGCCCCCGGACGCGACCTTCAA
                      ____________________________________________________________
consensus             CGATATCCAGCTCGAGTCCGAGGAGTGCCTCAAGTATTTGCCGCCCGACGCGAGCGTCAA
 
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rJMFF024K20+          CGGGAACGTGTTCTACAATTACGGGGCGAAACCGTTGGACCTGGGCCAGGATCGCAAGGA
rJMFF007L04+          CGGGAACGTGTTCTACAATTACGGGGCGAAACCGTTGGACCTGGGCCACGATCGCAAGGA
rJMFF042N12+          CGGGAACGTGTTCTACAATTACGGGGCGAAACCGTTGGACCTGGGCCAGGATCGCAAGGA
rJMSF006D10+          CGGGAACGCCTTCTATAATTACGGCGTGAAGCCGTTGGAACTGGGGCAGGATCGCAAGGA
                      ____________________________________________________________
consensus             CGGGAACGTGTTCTACAATTACGGGGCGAAACCGTTGGACCTGGGCCAGGATCGCAAGGA
 
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rJMFF024K20+          GCTGGAGGCGGAGCTCAAGCGGATGGCGCCTCTCAACGGCCGCACCGTCCTCATCTTCCG
rJMFF007L04+          GCTGGAGGCGGAGCTCAAGCGGATGGCGCCTCTCAACGGCCGCACCGTCCTCATCTTCCG
rJMFF042N12+          GCTGGAGGCGGAGCTCAAGCGGATGGCGCCTCTCAACGGCCGCACCGTCCTCATCTTCCG
rJMSF006D10+          GCTGGAGGCGGAGCTGAAGAGGATGGCACCGCCCAACGGCCGCACCGTTCTCATCTTCCG
                      ____________________________________________________________
consensus             GCTGGAGGCGGAGCTCAAGCGGATGGCGCCTCTCAACGGCCGCACCGTCCTCATCTTCCG
 
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rJMFF024K20+          AGCGCCCTGCGGATGCCCGGCAGGTAGATTGGAAGTTTGGGGGAATAAGAAAATTC    
rJMFF007L04+          AGCGCCCTGCGGATGCCCGGCAGGTAGATTGGAAGTTTGGGGGAATAAGAAAATTC    
rJMFF042N12+          AGCGCCCTGCGGATGCCCGGCAGGTAGATTGGAAGTTTGGGGGAATAAGAAAATTC    
rJMSF006D10+          GGCACCCTGCGGCTGCCCTGCAGGTAGATTGGAGGTTTGGGGGAATAAGAAAATTCNTAG
                      ____________________________________________________________
consensus             AGCGCCCTGCGGATGCCCGGCAGGTAGATTGGAAGTTTGGGGGAATAAGAAAATTCNTAG
 
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rJMSF006D10+          AGTTAAGAAATNAATTTTATACGGAGGGAGGGAGTCCGTAGAGTTATAGCTCTTAGTTTG
                      ____________________________________________________________
consensus             AGTTAAGAAATNAATTTTATACGGAGGGAGGGAGTCCGTAGAGTTATAGCTCTTAGTTTG
 
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rJMSF006D10+          TTATTGTTCCAGCAGGATCCATCCTNATACCAATGATGAATAAANTAGGAGATATCATCA
                      ____________________________________________________________
consensus             TTATTGTTCCAGCAGGATCCATCCTNATACCAATGATGAATAAANTAGGAGATATCATCA