Contig 004185:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005H14+                                                        ACTAATGTATGCAG
                      ____________________________________________________________
consensus                                                           ACTAATGTATGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005H14+          TTCAGGTGATGAACTTCTTGAAAATGCTTATTGAGAAGACATTACGAGAAAGAAAAGATT
                      ____________________________________________________________
consensus             TTCAGGTGATGAACTTCTTGAAAATGCTTATTGAGAAGACATTACGAGAAAGAAAAGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005H14+          CTGTTATAGAACCAGCTTCCAACATAGAGCCATACGGTGAAGATGGTCACCAGAATCCTC
                      ____________________________________________________________
consensus             CTGTTATAGAACCAGCTTCCAACATAGAGCCATACGGTGAAGATGGTCACCAGAATCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005H14+          CTCAGTTTATCCTGTTGAAGATCCCTACATATAACTCAGCCGAATTGTCAGAGCAGGTGT
                      ____________________________________________________________
consensus             CTCAGTTTATCCTGTTGAAGATCCCTACATATAACTCAGCCGAATTGTCAGAGCAGGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005H14+          TCACCGTTGAAGATCCCTACACGGAGAGCCTTTCTGATTCTAATCCAGTTGGTAACCTCA
                      ____________________________________________________________
consensus             TCACCGTTGAAGATCCCTACACGGAGAGCCTTTCTGATTCTAATCCAGTTGGTAACCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005H14+          CCGATGAAGAATATCTCAGTTATACAGCTTCAACTGAGGAATCTGAAGAAACCGGCTCTT
                      ____________________________________________________________
consensus             CCGATGAAGAATATCTCAGTTATACAGCTTCAACTGAGGAATCTGAAGAAACCGGCTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF027N03+                                                        TGAAAACAAATGCA
rJMSF005H14+          CTGAATCTCTTCTCAACACTAGCATATTAGGTCAGTCTCTAGGAACTGAAAACAAATGCA
                      ____________________________________________________________
consensus             CTGAATCTCTTCTCAACACTAGCATATTAGGTCAGTCTCTAGGAACTGAAAACAAATGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF027N03+          AAGGAATTAGCAATATGAGCCGTATCAATTCCATGACAGAGCGGATTGAAGCCTGNCGAT
rJMSF005H14+          AAGGAATTAGCAATTTGAGCCGTATCAATTCCATGACAGAGCGGATTGAAGCCTGGCGAT
                      ____________________________________________________________
consensus             AAGGAATTAGCAATTTGAGCCGTATCAATTCCATGACAGAGCGGATTGAAGCCTGGCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF027N03+          GAAGAAAACGTCANTGACTGAATTGGCAAAACGTTCCTCTCTCTGTNTGGCTGTGAAAAC
rJMSF005H14+          GAAGAAAACGTCACTGACTGAATTGGCAAAACGTTCCTCTCTCTGTTTGGCTGTGAAAAC
                      ____________________________________________________________
consensus             GAAGAAAACGTCACTGACTGAATTGGCAAAACGTTCCTCTCTCTGTTTGGCTGTGAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF027N03+          CGTGATTTGGTAAATGTATTTTTATCTTAGCGTCGAGTGG                    
rJMSF005H14+          CGTGATTTGGTAAATGTATTTTTATCTTAGCGTCGAGTGGTTTGGTTTTAACTCGGTTAC
                      ____________________________________________________________
consensus             CGTGATTTGGTAAATGTATTTTTATCTTAGCGTCGAGTGGTTTGGTTTTAACTCGGTTAC