Contig 004183:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004A10Sequence192009000 (6)358004183 (2)
JMSF004C12Sequence291009543 (7)gb|AAV88066.1|5e-04NBS-LRR protein [Ipomoea batatas]342004183 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF004C12+ CAGTGATGTCAGCCAAGCAAATTCAGGNTGAACAGCANGAATATGGAAATGAGAAT
rJMSF004A10+ TGCAGTGATGTCAGCCAAGCAAATTCAGGCTGAACAGCATGAATATGGAAATGAGAAT
                      ____________________________________________________________
consensus TGCAGTGATGTCAGCCAAGCAAATTCAGGCTGAACAGCATGAATATGGAAATGAGAAT
 
. : . : . : . : . : . :
rJMSF004C12+ ATGATTGTCATTGAGGAAAACACAATACAGCCTAACCCTGAAGATGAAGTCGAGTCTGAT
rJMSF004A10+ ATGATTGTCATTGANGAAAACACAATACAGCCTAACCCTGAAGATGAAGTCGAGTCTGAT
                      ____________________________________________________________
consensus ATGATTGTCATTGAGGAAAACACAATACAGCCTAACCCTGAAGATGAAGTCGAGTCTGAT
 
. : . : . : . : . : . :
rJMSF004C12+ GAAGATTTGGAGTAGNTGATGCAAAGCTATAGCAAAGAAACTAAGGGTGTGGGAAGAGCA
rJMSF004A10+ GAAGATTTGGAGTAGATGATGCAAAGCTATAGCAAAGAAACTNAGGGTGTGGGAAGAGCA
                      ____________________________________________________________
consensus GAAGATTTGGAGTAGATGATGCAAAGCTATAGCAAAGAAACTAAGGGTGTGGGAAGAGCA
 
. : . : . : . : . : . :
rJMSF004C12+ GATGGTTGTTAGTTGTGGCTGTTNTTGGTGTTTGAAATGGTTTGTGGTTCACATACAGCT
rJMSF004A10+ GATGGTCGTTAGTTGTGGCTGTTTTTGGNGTTTGAAATGGTTTGTGGTTCACATACAGCT
                      ____________________________________________________________
consensus GATGGTTGTTAGTTGTGGCTGTTTTTGGTGTTTGAAATGGTTTGTGGTTCACATACAGCT
 
. : . : . : . : . : . :
rJMSF004C12+ TCTT
rJMSF004A10+ TCTTCAGCTGCAAATTTGAATAGGGTATACANTACTATATTACTGTCTTGTATTGGCTGC
                      ____________________________________________________________
consensus TCTTCAGCTGCAAATTTGAATAGGGTATACANTACTATATTACTGTCTTGTATTGGCTGC
 
. : . : . : . : . : . :
rJMSF004A10+ TTCTAGGAATGACCAATATAATCTGCTGGATTTAAGGCTTGCTAGATGGATTTAGGAAAT
                      ____________________________________________________________
consensus TTCTAGGAATGACCAATATAATCTGCTGGATTTAAGGCTTGCTAGATGGATTTAGGAAAT