Contig 004181:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF003J07-                                    GGTGCAACAGACACAGTATTGAAGCTGAGCTCAAT
                      ____________________________________________________________
consensus                                      GGTGCAACAGACACAGTATTGAAGCTGAGCTCAAT
 
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JMSF003J07-           GATAATGGCGGCTTCTTCCATAATATCCCCAGCTCTCACCTCCACATCTTCCTCCTCTTC
JMSF015H12-              AATGGCGGCTTCTTCCATAATATCCCCAGCTCTCACCTCCACATCTTCCTCCTCTTC
rJMSF015H12+                                                                  CTTC
                      ____________________________________________________________
consensus             GATAATGGCGGCTTCTTCCATAATATCCCCAGCTCTCACCTCCACATCTTCCTCCTCTTC
 
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JMSF003J07-           GAAACCACCATTGACCCACTCTCCCTCGCCTTCATTCCTCTGCTTCAAGATTTCCCCCAG
JMSF015H12-           GAAACCACCATTGACCCACTCTCCCTCGCCTTCATTCCTCTGCTTCAAGATTTCCCCCAG
rJMSF015H12+          GAAACCACCATTGACCCACTCTCCCTCGCCTTCATTCCTCTGCTTCAAGATTTCCCCCAG
rJMSF003J07+                                                  TGCTTCAAGATTTCCCCCAG
                      ____________________________________________________________
consensus             GAAACCACCATTGACCCACTCTCCCTCGCCTTCATTCCTCTGCTTCAAGATTTCCCCCAG
 
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JMSF003J07-           ACCCTCAAAACCTCTGCTTCTCCACGCAAGGGGTAAGATAGTCAAGGCTCAGACCTTGGA
JMSF015H12-           ACCCTCAAAACCTCTGCTTCTCCACGCAAGGGGTAAGATAGTCAAGGCTCAGACCTTGGA
rJMSF015H12+          ACCCTCAAAACCTCTGCTTCTCCACGCAAGGGGTAAGATAGTCAAGGCTCAGACCTTGGA
rJMSF003J07+          ACCCTCAAAACCTCTGCTTCTCCACGCAAGGGGTAAGATAGTCAAGGCTCAGACCTTGGA
                      ____________________________________________________________
consensus             ACCCTCAAAACCTCTGCTTCTCCACGCAAGGGGTAAGATAGTCAAGGCTCAGACCTTGGA
 
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JMSF003J07-           ATTTTCGAATTCTTCTTTCTACGAGGACGGTTTGGGAGACG                   
JMSF015H12-           ATTTTCGAATTCTTCTTTCTACGAGGACGGTTTGGGAGACGACGACGACCCGCCGAGTAT
rJMSF015H12+          ATTTTCGAATTCTTCTTTCTACGAGGACGGTTTGGGAGACGACGACGACCCGCCGAGTAT
rJMSF003J07+          ATTTTCGAATTCTTCTTTCTACGAGGACGGTTTGGGAGACGACGACGACCCGCCGAGTAT
                      ____________________________________________________________
consensus             ATTTTCGAATTCTTCTTTCTACGAGGACGGTTTGGGAGACGACGACGACCCGCCGAGTAT
 
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JMSF015H12-           ACCCGGGTTGGGCATTTCCGATATTGAAGATAAAGAGGAGCCCCAATGCCCTCCCGGTCT
rJMSF015H12+          ACCCGGGTTGGGCATTTCCGATATTGAAGATAAAGAGGAGCCCCAATGCCCTCCCGGTCT
rJMSF003J07+          ACCCGGGTTGGGCATTTCCGATATTGAAGATAAAGAGGAGCCCCAATGCCCTCCCGGTCT
                      ____________________________________________________________
consensus             ACCCGGGTTGGGCATTTCCGATATTGAAGATAAAGAGGAGCCCCAATGCCCTCCCGGTCT
 
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JMSF015H12-           CAGGAAGTACGAGACCATGGCGGTTCTAAGGCCCGACTTGTCCGAAGACGAGCGCCTCAC
rJMSF015H12+          CAGGAAGTACGAGACCATGGCGGTTCTAAGGCCCGACTTGTCCGAAGACGAGCGCCTCAC
rJMSF003J07+          CAGGAAGTACGAGACCATGGCGGTTCTAAGGCCCGACTTGTCCGAAGACGAGCGCCTCAC
                      ____________________________________________________________
consensus             CAGGAAGTACGAGACCATGGCGGTTCTAAGGCCCGACTTGTCCGAAGACGAGCGCCTCAC
 
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JMSF015H12-           CCTTGTCCAGAAATACGAAGAGTTGCTTGTTACTGGTGGTGGTATGTATGTGGAGGTGTT
rJMSF015H12+          CCTTGTCCAGAAATACGAAGAGTTGCTTGTTACTGGTGGTGGTATGTATGTGGAGGTGTT
rJMSF003J07+          CCTTGTCCAGAAATACGAAGAGTTGCTTGTTACTGGTGGTGGTATGTATGTGGAGGTGTT
                      ____________________________________________________________
consensus             CCTTGTCCAGAAATACGAAGAGTTGCTTGTTACTGGTGGTGGTATGTATGTGGAGGTGTT
 
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JMSF015H12-           CAACAAAGGGATTATTCCACTTTCATACAACATTAGGAAGAAAAACAAAGCAGGAGAGAC
rJMSF015H12+          CAACAAAGGGATTATTCCACTTTCATACAACATTAGGAAGAAAAACAAAGCAGGAGAGAC
rJMSF003J07+          CAACAAAGGGATTATTCCACTTTCATACAACATTAGGAAGAAAAACAAAGCAGGAGAGAC
                      ____________________________________________________________
consensus             CAACAAAGGGATTATTCCACTTTCATACAACATTAGGAAGAAAAACAAAGCAGGAGAGAC
 
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JMSF015H12-           GAACATATACNTGGACGGGATCTACCTCTTATT                           
rJMSF015H12+          GAACATATACATGGACGGGATCTACCTCTTATTCACCTATTTTACCAAACCCGAATCCCT
rJMSF003J07+          GAACATATACATGGACGGGATCTACCTCTTATTCACCTATTTTACCAAACCCGAATCCCT
                      ____________________________________________________________
consensus             GAACATATACATGGACGGGATCTACCTCTTATTCACCTATTTTACCAAACCCGAATCCCT
 
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rJMSF015H12+          GACTGCCCTCGAGACTGCGCTGAAGACAGATGACGATGTTATCCGGTCGTCAAGTTTCAA
rJMSF003J07+          GACTGCCCTCGAGACTGCACTGAAGACAGATGACGATGTTATCCGGTCGTCAAGTTTCAA
                      ____________________________________________________________
consensus             GACTGCCCTCGAGACTGCGCTGAAGACAGATGACGATGTTATCCGGTCGTCAAGTTTCAA
 
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rJMSF015H12+          GGTTAGGAAAAGAAAGCACTGATTTGTCTCATCTGTGAAGATGTACAAGACAGTCACGTA
rJMSF003J07+          GGTTAGGAAAAGAAAGCACTGATTTGTCTCATCTGTGAAGATGTACAAGACAGTCACGTA
                      ____________________________________________________________
consensus             GGTTAGGAAAAGAAAGCACTGATTTGTCTCATCTGTGAAGATGTACAAGACAGTCACGTA
 
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rJMSF015H12+          AGGTAGAGGTATGTCTCTGATCTTTGCTGAATGTTGACGTGGAATTACAGAAATGAAAAC
rJMSF003J07+          AGGTAGAGGTATGTCTCTGATCTTTGCTGAATGTTGACGTGGAATTACAGAAATGAAAAC
                      ____________________________________________________________
consensus             AGGTAGAGGTATGTCTCTGATCTTTGCTGAATGTTGACGTGGAATTACAGAAATGAAAAC
 
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rJMSF015H12+          ATAGATTTTTCTCGTCTATTTAGCTGGTGATATATAG                       
rJMSF003J07+          ATAGATTTTTCTCGTCTATTTAGCTGGTGATATATAGGCTGCCTGTAATATCCATGCTAC
                      ____________________________________________________________
consensus             ATAGATTTTTCTCGTCTATTTAGCTGGTGATATATAGGCTGCCTGTAATATCCATGCTAC