| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025I19 | Sequence | 658 | 004173 (6) | ref|XP_009621612.1| | 1e-64 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X3 [Nicotiana tomento | |||||
| JMFF051D15 | Sequence | 589 | 008020 (7) | ref|XP_009783429.1| | 7e-62 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest | 550 | 004173 (6) | ref|XP_010038681.1| | 6e-36 | PREDICTED: putative acyl-coenzyme A oxidase At3g06690 [Eucalyptus grandis] |
| JMSF004L01 | Sequence | 414 | 008020 (7) | ref|XP_009783429.1| | 6e-50 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest | 470 | 004173 (6) | ref|XP_002525155.1| | 2e-39 | acyl-CoA oxidase, putative [Ricinus communis] gb|EEF37282.1| acyl-CoA oxidase, p |
| JMSF022M10 | Sequence | 596 | 008020 (7) | ref|XP_009783429.1| | 9e-89 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest | 752 | 004173 (6) | ref|XP_009621612.1| | 4e-80 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X3 [Nicotiana tomento |
| JMSF037J20 | Sequence | 715 | 008020 (7) | ref|XP_009621605.1| | 2e-92 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | 744 | 004173 (6) | ref|XP_009621605.1| | 8e-88 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento |
| JMSF041N24 | Sequence | 1068 | 008020 (7) | ref|XP_011100229.1| | 6e-53 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Sesamum indicum] | 708 | 004173 (6) | ref|XP_009621612.1| | 4e-77 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X3 [Nicotiana tomento |
This contig is upended
. : . : . : . : . : . :
rJMSF037J20+ GGAACACAT
____________________________________________________________
consensus GGAACACAT
. : . : . : . : . : . :
rJMSF041N24+ GGAGTATCCG
rJMSF037J20+ GAATGAATCTTCTCCTGTTATACCTTCTCAGCTTTCAAGTGATGCCCTAAGGAGTATCCG
____________________________________________________________
consensus GAATGAATCTTCTCCTGTTATACCTTCTCAGCTTTCAAGTGATGCCCTAAGGAGTATCCG
. : . : . : . : . : . :
rJMSF041N24+ TTTCCAGACTGACATACTCTGCCTGCGGGAGAGAGACCTTTTGAATCGCTTTGCTGCTGA
rJMSF037J20+ TTTCCAGACTGACATACTCTGCCTGCGGGAGAGAGACCTTTTGAATCGCTTTGCTGCTGA
rJMFF025I19+ GA
____________________________________________________________
consensus TTTCCAGACTGACATACTCTGCCTGCGGGAGAGAGACCTTTTGAATCGCTTTGCTGCTGA
. : . : . : . : . : . :
rJMSF041N24+ AGTTTCAGTCAGGCAATCACAGGGAGAAAGTAAAGAATATGCCTTTGCAATGAGTTACCA
rJMSF037J20+ AGTTTCAGTCAGGCAATCACAGGGAGAAAGTAAAGAATATGCCTTTGCAATGAGTTACCA
rJMFF025I19+ AGTTTCAGTCAGGCAATCACAGGGAGAAAGTAAAGAATATGCCTTTGCAATGAGTTACCA
rJMSF022M10+ TGAGTTACCA
____________________________________________________________
consensus AGTTTCAGTCAGGCAATCACAGGGAGAAAGTAAAGAATATGCCTTTGCAATGAGTTACCA
. : . : . : . : . : . :
rJMSF041N24+ ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
rJMSF037J20+ ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
rJMFF025I19+ ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
rJMSF022M10+ ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
____________________________________________________________
consensus ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
. : . : . : . : . : . :
rJMSF041N24+ GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMSF037J20+ GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMSF004L01+ ATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMFF025I19+ GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMSF022M10+ GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMFF051D15+ TAAGATCAAT
____________________________________________________________
consensus GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
. : . : . : . : . : . :
rJMSF041N24+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMSF037J20+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMSF004L01+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMFF025I19+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMSF022M10+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMFF051D15+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
____________________________________________________________
consensus GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
. : . : . : . : . : . :
rJMSF041N24+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
rJMSF037J20+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGTAAAGCTTTGCAGTGAACTTCGACCACA
rJMSF004L01+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
rJMFF025I19+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
rJMSF022M10+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
rJMFF051D15+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
____________________________________________________________
consensus AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
. : . : . : . : . : . :
rJMSF041N24+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMSF037J20+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMSF004L01+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMFF025I19+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMSF022M10+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMFF051D15+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
____________________________________________________________
consensus CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
. : . : . : . : . : . :
rJMSF041N24+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMSF037J20+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMSF004L01+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMFF025I19+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMSF022M10+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMFF051D15+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
____________________________________________________________
consensus CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
. : . : . : . : . : . :
rJMSF041N24+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMSF037J20+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMSF004L01+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMFF025I19+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMSF022M10+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMFF051D15+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
____________________________________________________________
consensus TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
. : . : . : . : . : . :
rJMSF041N24+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMSF037J20+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMSF004L01+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMFF025I19+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMSF022M10+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMFF051D15+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
____________________________________________________________
consensus AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
. : . : . : . : . : . :
rJMSF041N24+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMSF037J20+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMSF004L01+ AATAAAACCTATTNTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMFF025I19+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMSF022M10+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMFF051D15+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
____________________________________________________________
consensus AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
. : . : . : . : . : . :
rJMSF041N24+ TAAAATGAATAAGT
rJMSF037J20+ TAAAATGAATAAGT
rJMSF004L01+ TAAAATGAATAAGTTATA
rJMFF025I19+ TAAAATGAATAAGTTATAGCAATGTAAACGTAACAGAGCCTACATGGAGACATCAT
rJMSF022M10+ TAAAATGAATAAGTTATAGCAATGTAAACGTAACAGAGCCTACATGGAGACATCAT
rJMFF051D15+ TAAAATGAATAAGTTATAGCAATGTAAACGTAACAGAGCCTACATGGAGACATCATTAAC
____________________________________________________________
consensus TAAAATGAATAAGTTATAGCAATGTAAACGTAACAGAGCCTACATGGAGACATCATTAAC
. : . : . : . : . : . :
rJMFF051D15+ TGTGTTCACATGTCTCACCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus TGTGTTCACATGTCTCACCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG