Contig 004173:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025I19Sequence658004173 (6)ref|XP_009621612.1|1e-64PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X3 [Nicotiana tomento
JMFF051D15Sequence589008020 (7)ref|XP_009783429.1|7e-62PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest550004173 (6)ref|XP_010038681.1|6e-36PREDICTED: putative acyl-coenzyme A oxidase At3g06690 [Eucalyptus grandis]
JMSF004L01Sequence414008020 (7)ref|XP_009783429.1|6e-50PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest470004173 (6)ref|XP_002525155.1|2e-39acyl-CoA oxidase, putative [Ricinus communis] gb|EEF37282.1| acyl-CoA oxidase, p
JMSF022M10Sequence596008020 (7)ref|XP_009783429.1|9e-89PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest752004173 (6)ref|XP_009621612.1|4e-80PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X3 [Nicotiana tomento
JMSF037J20Sequence715008020 (7)ref|XP_009621605.1|2e-92PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento744004173 (6)ref|XP_009621605.1|8e-88PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento
JMSF041N24Sequence1068008020 (7)ref|XP_011100229.1|6e-53PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Sesamum indicum]708004173 (6)ref|XP_009621612.1|4e-77PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X3 [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF037J20+ GGAACACAT
                      ____________________________________________________________
consensus GGAACACAT
 
. : . : . : . : . : . :
rJMSF041N24+ GGAGTATCCG
rJMSF037J20+ GAATGAATCTTCTCCTGTTATACCTTCTCAGCTTTCAAGTGATGCCCTAAGGAGTATCCG
                      ____________________________________________________________
consensus GAATGAATCTTCTCCTGTTATACCTTCTCAGCTTTCAAGTGATGCCCTAAGGAGTATCCG
 
. : . : . : . : . : . :
rJMSF041N24+ TTTCCAGACTGACATACTCTGCCTGCGGGAGAGAGACCTTTTGAATCGCTTTGCTGCTGA
rJMSF037J20+ TTTCCAGACTGACATACTCTGCCTGCGGGAGAGAGACCTTTTGAATCGCTTTGCTGCTGA
rJMFF025I19+ GA
                      ____________________________________________________________
consensus TTTCCAGACTGACATACTCTGCCTGCGGGAGAGAGACCTTTTGAATCGCTTTGCTGCTGA
 
. : . : . : . : . : . :
rJMSF041N24+ AGTTTCAGTCAGGCAATCACAGGGAGAAAGTAAAGAATATGCCTTTGCAATGAGTTACCA
rJMSF037J20+ AGTTTCAGTCAGGCAATCACAGGGAGAAAGTAAAGAATATGCCTTTGCAATGAGTTACCA
rJMFF025I19+ AGTTTCAGTCAGGCAATCACAGGGAGAAAGTAAAGAATATGCCTTTGCAATGAGTTACCA
rJMSF022M10+ TGAGTTACCA
                      ____________________________________________________________
consensus AGTTTCAGTCAGGCAATCACAGGGAGAAAGTAAAGAATATGCCTTTGCAATGAGTTACCA
 
. : . : . : . : . : . :
rJMSF041N24+ ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
rJMSF037J20+ ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
rJMFF025I19+ ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
rJMSF022M10+ ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
                      ____________________________________________________________
consensus ACTCGCTGAAGACTTGGGCAGAGCCTTTGCAGACCGAGCAATTTTCCAAACTTTTGTAGA
 
. : . : . : . : . : . :
rJMSF041N24+ GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMSF037J20+ GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMSF004L01+ ATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMFF025I19+ GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMSF022M10+ GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
rJMFF051D15+ TAAGATCAAT
                      ____________________________________________________________
consensus GGCTGAGGCTTCTGTAAACTCCATTCCCATTAAGAATGCACTTGGTCTCGTAAGATCAAT
 
. : . : . : . : . : . :
rJMSF041N24+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMSF037J20+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMSF004L01+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMFF025I19+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMSF022M10+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
rJMFF051D15+ GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
                      ____________________________________________________________
consensus GTACGCTCTATTCACATTGGACGAAGATGCTGCATTCCTACGGTATGGATACTTGTCGAC
 
. : . : . : . : . : . :
rJMSF041N24+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
rJMSF037J20+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGTAAAGCTTTGCAGTGAACTTCGACCACA
rJMSF004L01+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
rJMFF025I19+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
rJMSF022M10+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
rJMFF051D15+ AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
                      ____________________________________________________________
consensus AGATAATGCTGCCACAATTAGGAAAGAAGTCGCAAAGCTTTGCAGTGAACTTCGACCACA
 
. : . : . : . : . : . :
rJMSF041N24+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMSF037J20+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMSF004L01+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMFF025I19+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMSF022M10+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
rJMFF051D15+ CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
                      ____________________________________________________________
consensus CGCGCTTGCATTGGTGAACTCCTTTGGCATACCTGATGCTTTCTTGAGTCCCATAGCCTT
 
. : . : . : . : . : . :
rJMSF041N24+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMSF037J20+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMSF004L01+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMFF025I19+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMSF022M10+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
rJMFF051D15+ CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
                      ____________________________________________________________
consensus CAATTGGATTGATGCAAATGCTTGGTCTTCCATTTAAGAATAATAATAGCTCATCACCAT
 
. : . : . : . : . : . :
rJMSF041N24+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMSF037J20+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMSF004L01+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMFF025I19+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMSF022M10+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
rJMFF051D15+ TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
                      ____________________________________________________________
consensus TATACTGGAAAATTGAAGTGGTTGACATCCATGGTTCTAGAACTTCAGCAAATAAGATGC
 
. : . : . : . : . : . :
rJMSF041N24+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMSF037J20+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMSF004L01+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMFF025I19+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMSF022M10+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
rJMFF051D15+ AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
                      ____________________________________________________________
consensus AGAAAAATTGTTCATCCCTCATCATATTCCTGCAGCTTGTCATCATCATCATCATCATCA
 
. : . : . : . : . : . :
rJMSF041N24+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMSF037J20+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMSF004L01+ AATAAAACCTATTNTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMFF025I19+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMSF022M10+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
rJMFF051D15+ AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
                      ____________________________________________________________
consensus AATAAAACCTATTTTACTGTATTATATTATTACTTCTGTTAAAACCTGTACTTGTTATAG
 
. : . : . : . : . : . :
rJMSF041N24+ TAAAATGAATAAGT
rJMSF037J20+ TAAAATGAATAAGT
rJMSF004L01+ TAAAATGAATAAGTTATA
rJMFF025I19+ TAAAATGAATAAGTTATAGCAATGTAAACGTAACAGAGCCTACATGGAGACATCAT
rJMSF022M10+ TAAAATGAATAAGTTATAGCAATGTAAACGTAACAGAGCCTACATGGAGACATCAT
rJMFF051D15+ TAAAATGAATAAGTTATAGCAATGTAAACGTAACAGAGCCTACATGGAGACATCATTAAC
                      ____________________________________________________________
consensus TAAAATGAATAAGTTATAGCAATGTAAACGTAACAGAGCCTACATGGAGACATCATTAAC
 
. : . : . : . : . : . :
rJMFF051D15+ TGTGTTCACATGTCTCACCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TGTGTTCACATGTCTCACCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG