Contig 004172:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051C11Sequence647023782621004172 (2)
JMSF007I24Sequence269023125697004172 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007I24+ CTATACTTCCTCAGTCTACTATGGCACTGTGAAGAAACCCTAGCCTTCATTAGAAAGGT
                      ____________________________________________________________
consensus CTATACTTCCTCAGTCTACTATGGCACTGTGAAGAAACCCTAGCCTTCATTAGAAAGGT
 
. : . : . : . : . : . :
rJMSF007I24+ TACCAGATCATGTTGTTAATATGGGAATCTGAGTGCAATTTCTGGTAANTTCATCCTATT
                      ____________________________________________________________
consensus TACCAGATCATGTTGTTAATATGGGAATCTGAGTGCAATTTCTGGTAANTTCATCCTATT
 
. : . : . : . : . : . :
rJMSF007I24+ TTTTGTTGTTCTTTCATTTCNGAGAAAGCCATGTTTAGGATCTTTCTTTCAATCGGTGAA
                      ____________________________________________________________
consensus TTTTGTTGTTCTTTCATTTCNGAGAAAGCCATGTTTAGGATCTTTCTTTCAATCGGTGAA
 
. : . : . : . : . : . :
rJMSF007I24+ GGATNAGCTAAATACCCCTTGACTATGAAGATGACTAAGTCTTGAACACCGGATTGCGAC
                      ____________________________________________________________
consensus GGATNAGCTAAATACCCCTTGACTATGAAGATGACTAAGTCTTGAACACCGGATTGCGAC
 
. : . : . : . : . : . :
rJMSF007I24+ ANGCAAAACAGGGCATCTTCAATTCGATTTTTGTAGAGATCAAAGATCTTACCTGACCCA
rJMFF051C11+ AGATCAGAGATCTTACCTGACCCA
                      ____________________________________________________________
consensus ANGCAAAACAGGGCATCTTCAATTCGATTTTTGTAGAGATCAGAGATCTTACCTGACCCA
 
. : . : . : . : . : . :
rJMSF007I24+ AACGTAAACTTGGGAACCAAACCGAGTATGCAGAAGGGATCTTGTACAGTGTTTAAATGA
rJMFF051C11+ AACGTAAACTTGGGAACCAAACCGAGTATGCAGAAGAGATCTTGTACACTGTTTAAATGA
                      ____________________________________________________________
consensus AACGTAAACTTGGGAACCAAACCGAGTATGCAGAAGGGATCTTGTACAGTGTTTAAATGA
 
. : . : . : . : . : . :
rJMSF007I24+ TGCTCCAAAGTTGTGAGGGCGAAAGGGATACACATTGTGATATTGTTTTGGAAGGCAAAG
rJMFF051C11+ TGCTCCAAAGTTGTGAGGGCGAAAGGGATACACATTGTGATATTGTTTTGGAAGGCAAAG
                      ____________________________________________________________
consensus TGCTCCAAAGTTGTGAGGGCGAAAGGGATACACATTGTGATATTGTTTTGGAAGGCAAAG
 
. : . : . : . : . : . :
rJMSF007I24+ CAGNTCACTGGTGTAGATGAGCGTGTTTGATTCGAAGATGAGCACTGGTGTACCAATGCT
rJMFF051C11+ CAGATCACTAGTGTAGATGAGCGTGTTTGATTCGAAGATGAGCACTGGTGTACAAATGCT
                      ____________________________________________________________
consensus CAGATCACTGGTGTAGATGAGCGTGTTTGATTCGAAGATGAGCACTGGTGTACCAATGCT
 
. : . : . : . : . : . :
rJMSF007I24+ TCGACTGTTATTTAAATATACATGGCCTGCACTATCGTTGGAAAACCCANTTCGGCGTAA
rJMFF051C11+ TCGACTGTTATTTAAATAGCCATGGCCTGCACTATCGTTGGAAAACCCAATTCGGCGTAA
                      ____________________________________________________________
consensus TCGACTGTTATTTAAATATCCATGGCCTGCACTATCGTTGGAAAACCCAATTCGGCGTAA
 
. : . : . : . : . : . :
rJMSF007I24+ TGAATATGTGAACATAATTGTTTACATAAATATGTTATCGGNAANCGCAGAGACCAACCT
rJMFF051C11+ TGAATATGTGAACATAATTGTTTACATAAATATGTTATCAGAAAACGCAGAGACCAACCT
                      ____________________________________________________________
consensus TGAATATGTGAACATAATTGTTTACATAAATATGTTATCGGAAAACGCAGAGACCAACCT
 
. : . : . : . : . : . :
rJMSF007I24+ ATTTCNAATTAGGTCTTTAATTTGATTGGTTGAAATTGATTCTGTAAACCAAAAATAAAA
rJMFF051C11+ ATTTCAAATTAGGTCTTTAATTTGATTGGTTGAAATTGATTCTGTAAACCAAAAATAAAA
                      ____________________________________________________________
consensus ATTTCAAATTAGGTCTTTAATTTGATTGGTTGAAATTGATTCTGTAAACCAAAAATAAAA
 
. : . : . : . : . : . :
rJMSF007I24+ GGAAACAATTTTTTTT
rJMFF051C11+ GGAAACAATTATTTTTTTTTAAAAAGTCTTTGGTAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus GGAAACAATTTTTTTTTTTTAAAAAGTCTTTGGTAAAAAAAAAAAAAAACTCTCCAGGGT