Contig 004170:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013L21Sequence486007632 (4)ref|XP_002277767.1|6e-19PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 634004170 (2)ref|XP_009769471.1|8e-73PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1
JMFF050O14Sequence634007632 (4)ref|XP_002277767.1|3e-37PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 561004170 (2)ref|XP_009618288.1|7e-53PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1

Alignment

This contig is upended


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rJMFF013L21+          GGCGAAACGGGTAAACATATGCCTAACGGTAGCGAGGGCGATGTACTATTTGCACACGGG
                      ____________________________________________________________
consensus             GGCGAAACGGGTAAACATATGCCTAACGGTAGCGAGGGCGATGTACTATTTGCACACGGG
 
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rJMFF013L21+          GTGCAGAGAGTTTATTAGTCACGGAANCCTGAAATGCCAAAACGTGGTATTGGACGATGA
rJMFF050O14+                                                 AAACGTGGTATTGGACGATGA
                      ____________________________________________________________
consensus             GTGCAGAGAGTTTATTAGTCACGGAANCCTGAAATGCCAAAACGTGGTATTGGACGATGA
 
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rJMFF013L21+          ACTGGGAGCTAAGGTGAGCGAGTTTGGTTTAAGGGTACTTCTTCGCGGGGAACCCAACAA
rJMFF050O14+          ACTGGGAGCTAAGGTGAGCGAGTTTGGTTTAAGGGTACTTCTTCGCGGGGAACCCAACAA
                      ____________________________________________________________
consensus             ACTGGGAGCTAAGGTGAGCGAGTTTGGTTTAAGGGTACTTCTTCGCGGGGAACCCAACAA
 
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rJMFF013L21+          CGAGGAGGGTCCGGGAGAGACAGACGTGCGAGATCTTGGTAGGATGATGGTGGTTTTGAT
rJMFF050O14+          CGAGGAGGGTCCGGGAGAGACAGACGTGCGAGATCTTGGTAGGATGATGGTGGTTTTGAT
                      ____________________________________________________________
consensus             CGAGGAGGGTCCGGGAGAGACAGACGTGCGAGATCTTGGTAGGATGATGGTGGTTTTGAT
 
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rJMFF013L21+          CACCGGATGCCAAGATGCAGACGAGGCTTGCAAATGGGCATATGAGAGATGGGTGAGAGG
rJMFF050O14+          CACCGGATGCCAAGATGCAGACGAGGCTTGCAAATGGGCATATGAGAGATGGGTGAGAGG
                      ____________________________________________________________
consensus             CACCGGATGCCAAGATGCAGACGAGGCTTGCAAATGGGCATATGAGAGATGGGTGAGAGG
 
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rJMFF013L21+          CGAATCGGAGGTAGTGACTGATAAGCGAATGGAAGGTGGAGTCAATTTAGACGAGGTGGA
rJMFF050O14+          CGAATCGGAGGTAGTGACTGATAAGCGAATGGAAGGTGGAGTCAATTTAGACGAGGTGGA
                      ____________________________________________________________
consensus             CGAATCGGAGGTAGTGACTGATAAGCGAATGGAAGGTGGAGTCAATTTAGACGAGGTGGA
 
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rJMFF013L21+          GTGTATGCTAAGGCTTGTGTTTTGGTGCGTGCAAGGGGACGAGCGAATGAGGCCTTCAAT
rJMFF050O14+          GTGTATGCTAAGGCTTGTGTTTTGGTGCGTGCAAGGGGACGAGCGAATGAGGCCTTCAAT
                      ____________________________________________________________
consensus             GTGTATGCTAAGGCTTGTGTTTTGGTGCGTGCAAGGGGACGAGCGAATGAGGCCTTCAAT
 
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rJMFF013L21+          GGGCGAGGTCGTGGAGGTATTAGAGGGTAGACTACCCGTCGATCCGCCTCCTCCTCTTTA
rJMFF050O14+          GGGCGAGGTCGTGGAGGTATTAGAGGGTAGACTACCCGTCGATCCGCCTCCTCCTCTTTA
                      ____________________________________________________________
consensus             GGGCGAGGTCGTGGAGGTATTAGAGGGTAGACTACCCGTCGATCCGCCTCCTCCTCTTTA
 
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rJMFF013L21+          CTGTCACCACAATCAAACGTCGCCTGAAGACGAGCAAACATCCACCCCATCATCCACTTC
rJMFF050O14+          CTGTCACCACAATCAAACGTCGCCTGAAGACGAGCAAACATCCACCCCATCATCCACTTC
                      ____________________________________________________________
consensus             CTGTCACCACAATCAAACGTCGCCTGAAGACGAGCAAACATCCACCCCATCATCCACTTC
 
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rJMFF013L21+          GGGCTTGTAATCTGATTCCCAATTTGGTTCAAATATATATATTTGTCATTGAACTTTATT
rJMFF050O14+          GGGCTTGTAATCTGATTCCCAATTTGGTTCAAATATATATATTTGTCATTGAACTTTATT
                      ____________________________________________________________
consensus             GGGCTTGTAATCTGATTCCCAATTTGGTTCAAATATATATATTTGTCATTGAACTTTATT
 
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rJMFF013L21+          TGTCATGTATAGTAGAGCTAACTGTGAAGCACCA                          
rJMFF050O14+          TGTCATGTATAGTAGAGCTAACTGTGAAGCACCATGTAGAATACAATACCCAGTTTTAGC
                      ____________________________________________________________
consensus             TGTCATGTATAGTAGAGCTAACTGTGAAGCACCATGTAGAATACAATACCCAGTTTTAGC