Contig 004168:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033B22Sequence436007420 (8)683004168 (5)ref|XP_009587969.1|4e-18PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Nicotiana tomentosiformis] gb|AA
JMFF050M14Sequence550007420 (8)ref|XP_009801714.1|3e-11PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Nicotiana sylvestris] gb|AAP0399590004168 (5)dbj|BAA74714.1|3e-09transcription factor TEIL [Nicotiana tabacum]
JMSF003B06Sequence261007420 (8)744004168 (5)dbj|BAA74714.1|7e-37transcription factor TEIL [Nicotiana tabacum]
JMSF020I03Sequence650007420 (8)gb|AAP03999.1|6e-41EIL3 [Nicotiana tabacum]759004168 (5)dbj|BAA74714.1|3e-38transcription factor TEIL [Nicotiana tabacum]
JMSF028P15Sequence595007420 (8)gb|AAP03999.1|2e-48EIL3 [Nicotiana tabacum]735004168 (5)dbj|BAA74714.1|1e-36transcription factor TEIL [Nicotiana tabacum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF003B06+ GGACTCGGTGTTCCAGAAGACGGGCAAAGGATGATCA
rJMSF028P15+ GGACTCGGTGTTCCAGAAGACGGGCAAAGGATGATCA
rJMSF020I03+ TCCTTCAATCTCTCGGGACTCGGTGTTCCAGAAGACGGGCAAAGGATGATCA
                      ____________________________________________________________
consensus TCCTTCAATCTCTCGGGACTCGGTGTTCCAGAAGACGGGCAAAGGATGATCA
 
. : . : . : . : . : . :
rJMSF003B06+ ACGATCTCATGTCGTTTTACGACACAAACATCCAGGGGAACAAAATCTCGAATCCTAGGA
rJMSF028P15+ ACGATCTCATGTCGTTCTACGACACAAACATCCAGGGGAACAAAATCTCGAATCCTAGGA
rJMSF020I03+ ACGATCTCATGTCGNTCTACGACACAAACATCCAGGGGAACAAAATCTCGAATCCTAGGA
rJMFF033B22+ AAAATCTCGAATCCTAGGA
                      ____________________________________________________________
consensus ACGATCTCATGTCGTTCTACGACACAAACATCCAGGGGAACAAAATCTCGAATCCTAGGA
 
. : . : . : . : . : . :
rJMSF003B06+ ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACA-TTCAGTGTCATCAGGGC
rJMSF028P15+ ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACA-TTCAGTGTCATCAGGGC
rJMSF020I03+ ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACA-TTCAGTGTCATCAGGGC
rJMFF033B22+ ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACATTTCAGTGTCATCAGGGC
                      ____________________________________________________________
consensus ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACA-TTCAGTGTCATCAGGGC
 
. : . : . : . : . : . :
rJMSF003B06+ GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACATTTCC
rJMSF028P15+ GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACGTTTCC
rJMSF020I03+ GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACATTTCC
rJMFF033B22+ GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACATTTCC
                      ____________________________________________________________
consensus GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACATTTCC
 
. : . : . : . : . : . :
rJMSF003B06+ TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
rJMSF028P15+ TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
rJMSF020I03+ TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
rJMFF033B22+ TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
rJMFF050M14+ CCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
                      ____________________________________________________________
consensus TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
 
. : . : . : . : . : . :
rJMSF003B06+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
rJMSF028P15+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
rJMSF020I03+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
rJMFF033B22+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
rJMFF050M14+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
                      ____________________________________________________________
consensus CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
 
. : . : . : . : . : . :
rJMSF003B06+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
rJMSF028P15+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
rJMSF020I03+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
rJMFF033B22+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
rJMFF050M14+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
                      ____________________________________________________________
consensus CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
 
. : . : . : . : . : . :
rJMSF003B06+ CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGGACCAAGAA
rJMSF028P15+ CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGGACCAAGAA
rJMSF020I03+ CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGGACCAAGAA
rJMFF033B22+ CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGAACCAAGAA
rJMFF050M14+ CTCAGCTGGTACTAGGTTGTTTGCAGCCTCGCCTCGCCTCACCGCTTTATGGACCAAGAA
                      ____________________________________________________________
consensus CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGGACCAAGAA
 
. : . : . : . : . : . :
rJMSF003B06+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
rJMSF028P15+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
rJMSF020I03+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
rJMFF033B22+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
rJMFF050M14+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
                      ____________________________________________________________
consensus CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
 
. : . : . : . : . : . :
rJMSF003B06+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
rJMSF028P15+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
rJMSF020I03+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
rJMFF033B22+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
rJMFF050M14+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
                      ____________________________________________________________
consensus CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
 
. : . : . : . : . : . :
rJMSF003B06+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
rJMSF028P15+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
rJMSF020I03+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
rJMFF033B22+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
rJMFF050M14+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
                      ____________________________________________________________
consensus ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
 
. : . : . : . : . : . :
rJMSF003B06+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
rJMSF028P15+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
rJMSF020I03+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
rJMFF033B22+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
rJMFF050M14+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
                      ____________________________________________________________
consensus ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
 
. : . : . : . : . : . :
rJMSF003B06+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTT
rJMSF028P15+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTG
rJMSF020I03+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTT
rJMFF033B22+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTTTATAAGTTGGTTG
rJMFF050M14+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTTTATAAGTTGGTTG
                      ____________________________________________________________
consensus CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTTTATAAGTTGGTTG
 
. : . : . : . : . : . :
rJMFF033B22+ GTTA
rJMFF050M14+ GTTATGTTTGAATGTTAAAAATCTGTTCTTCCGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus GTTATGTTTGAATGTTAAAAATCTGTTCTTCCGAAAAAAAAAAAAAAAACTCTCCAGGGT