| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033B22 | Sequence | 436 | 007420 (8) | 683 | 004168 (5) | ref|XP_009587969.1| | 4e-18 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Nicotiana tomentosiformis] gb|AA | |||
| JMFF050M14 | Sequence | 550 | 007420 (8) | ref|XP_009801714.1| | 3e-11 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Nicotiana sylvestris] gb|AAP0399 | 590 | 004168 (5) | dbj|BAA74714.1| | 3e-09 | transcription factor TEIL [Nicotiana tabacum] |
| JMSF003B06 | Sequence | 261 | 007420 (8) | 744 | 004168 (5) | dbj|BAA74714.1| | 7e-37 | transcription factor TEIL [Nicotiana tabacum] | |||
| JMSF020I03 | Sequence | 650 | 007420 (8) | gb|AAP03999.1| | 6e-41 | EIL3 [Nicotiana tabacum] | 759 | 004168 (5) | dbj|BAA74714.1| | 3e-38 | transcription factor TEIL [Nicotiana tabacum] |
| JMSF028P15 | Sequence | 595 | 007420 (8) | gb|AAP03999.1| | 2e-48 | EIL3 [Nicotiana tabacum] | 735 | 004168 (5) | dbj|BAA74714.1| | 1e-36 | transcription factor TEIL [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMSF003B06+ GGACTCGGTGTTCCAGAAGACGGGCAAAGGATGATCA
rJMSF028P15+ GGACTCGGTGTTCCAGAAGACGGGCAAAGGATGATCA
rJMSF020I03+ TCCTTCAATCTCTCGGGACTCGGTGTTCCAGAAGACGGGCAAAGGATGATCA
____________________________________________________________
consensus TCCTTCAATCTCTCGGGACTCGGTGTTCCAGAAGACGGGCAAAGGATGATCA
. : . : . : . : . : . :
rJMSF003B06+ ACGATCTCATGTCGTTTTACGACACAAACATCCAGGGGAACAAAATCTCGAATCCTAGGA
rJMSF028P15+ ACGATCTCATGTCGTTCTACGACACAAACATCCAGGGGAACAAAATCTCGAATCCTAGGA
rJMSF020I03+ ACGATCTCATGTCGNTCTACGACACAAACATCCAGGGGAACAAAATCTCGAATCCTAGGA
rJMFF033B22+ AAAATCTCGAATCCTAGGA
____________________________________________________________
consensus ACGATCTCATGTCGTTCTACGACACAAACATCCAGGGGAACAAAATCTCGAATCCTAGGA
. : . : . : . : . : . :
rJMSF003B06+ ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACA-TTCAGTGTCATCAGGGC
rJMSF028P15+ ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACA-TTCAGTGTCATCAGGGC
rJMSF020I03+ ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACA-TTCAGTGTCATCAGGGC
rJMFF033B22+ ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACATTTCAGTGTCATCAGGGC
____________________________________________________________
consensus ACTCTGGACCTGCTAAAGAACAACCTCTTCAACAAACCAACA-TTCAGTGTCATCAGGGC
. : . : . : . : . : . :
rJMSF003B06+ GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACATTTCC
rJMSF028P15+ GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACGTTTCC
rJMSF020I03+ GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACATTTCC
rJMFF033B22+ GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACATTTCC
____________________________________________________________
consensus GGTTTCCTTCAAAACCAAGGGATCATCCCGGGGAATATCTTCCAGGAGAGCAACATTTCC
. : . : . : . : . : . :
rJMSF003B06+ TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
rJMSF028P15+ TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
rJMSF020I03+ TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
rJMFF033B22+ TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
rJMFF050M14+ CCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
____________________________________________________________
consensus TCGACTCGTCCCATGTTCACATCGGGAGACCAGTTCGAGCAGCCCAAGGCTCTGAACTCC
. : . : . : . : . : . :
rJMSF003B06+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
rJMSF028P15+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
rJMSF020I03+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
rJMFF033B22+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
rJMFF050M14+ CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
____________________________________________________________
consensus CCTTTCAACGTCAGCTCCATCGAGACACTCCCCTTCATGTTTGGCCCTCCCTTCAACCTC
. : . : . : . : . : . :
rJMSF003B06+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
rJMSF028P15+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
rJMSF020I03+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
rJMFF033B22+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
rJMFF050M14+ CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
____________________________________________________________
consensus CCACCCTCCGATTACTCTGAAGGCTTACTTGGCGTTCCACCCCTGCCAAAGAAAGACATC
. : . : . : . : . : . :
rJMSF003B06+ CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGGACCAAGAA
rJMSF028P15+ CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGGACCAAGAA
rJMSF020I03+ CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGGACCAAGAA
rJMFF033B22+ CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGAACCAAGAA
rJMFF050M14+ CTCAGCTGGTACTAGGTTGTTTGCAGCCTCGCCTCGCCTCACCGCTTTATGGACCAAGAA
____________________________________________________________
consensus CTCAGCTGGTACTAGGTTGTCTGCAGCCTCGCCTCGCCTCACCGCTCTATGGACCAAGAA
. : . : . : . : . : . :
rJMSF003B06+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
rJMSF028P15+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
rJMSF020I03+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
rJMFF033B22+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
rJMFF050M14+ CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
____________________________________________________________
consensus CGCAACTCGATTTGGTCTGCCATTTTCAGGTCCAAAAACACCTTACAGCTATGCCATTTC
. : . : . : . : . : . :
rJMSF003B06+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
rJMSF028P15+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
rJMSF020I03+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
rJMFF033B22+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
rJMFF050M14+ CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
____________________________________________________________
consensus CATTTCCATTTCCATTTCCCATATAGTTATAGAAAGTCAAAGGGTTATATTGCATGGAGA
. : . : . : . : . : . :
rJMSF003B06+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
rJMSF028P15+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
rJMSF020I03+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
rJMFF033B22+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
rJMFF050M14+ ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
____________________________________________________________
consensus ATATAATTCTCTCTTAGATTTGCTAAACTTATTATAGGTCTTTAATAAGTTCTATTTTTG
. : . : . : . : . : . :
rJMSF003B06+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
rJMSF028P15+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
rJMSF020I03+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
rJMFF033B22+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
rJMFF050M14+ ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
____________________________________________________________
consensus ATCTTCCATATAGGAACTTTTATTATTATAATTATTGTTATGTGTAATCTGTCAAGCAAG
. : . : . : . : . : . :
rJMSF003B06+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTT
rJMSF028P15+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTG
rJMSF020I03+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTT
rJMFF033B22+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTTTATAAGTTGGTTG
rJMFF050M14+ CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTTTATAAGTTGGTTG
____________________________________________________________
consensus CAAAGGGCAGTGCAAAATATGCCTTTGTTATATCTATTGTATCTTTTTATAAGTTGGTTG
. : . : . : . : . : . :
rJMFF033B22+ GTTA
rJMFF050M14+ GTTATGTTTGAATGTTAAAAATCTGTTCTTCCGAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus GTTATGTTTGAATGTTAAAAATCTGTTCTTCCGAAAAAAAAAAAAAAAACTCTCCAGGGT