Contig 004166:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012K07Sequence107000227 (5)770004166 (10)gb|KDP30456.1|1e-59hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF014B13Sequence386000227 (5)544004166 (10)gb|KDP30456.1|6e-12hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF040I13Sequence436000227 (5)704004166 (10)gb|KDP30456.1|4e-51hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF041P22Sequence604000227 (5)598004166 (10)gb|KDP30456.1|2e-41hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF047P10Sequence587000227 (5)479004166 (10)
JMFF050K11Sequence635006105 (2)544004166 (10)
JMFN004D24Sequence627004166 (10)emb|CBI16497.3|1e-85unnamed protein product [Vitis vinifera]
JMFS150F10Sequence513004166 (10)
JMSF031J19Sequence747004166 (10)gb|KDP30456.1|2e-40hypothetical protein JCGZ_17126 [Jatropha curcas]
JMSF040A21Sequence130004166 (10)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           TTACACTTGTTTTTGTGGAGACGAAGAAAGGAGCTGATTCTCTAGAACATTGGCTCTGTA
                      ____________________________________________________________
consensus             TTACACTTGTTTTTGTGGAGACGAAGAAAGGAGCTGATTCTCTAGAACATTGGCTCTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           TTAACGGTTTCCCCGCTACTGCTATACATGGTGATAGGACACAACAGGAAAGAGAACAAG
rJMFF012K07+                                                      CAGGAAAGAGANCAAG
                      ____________________________________________________________
consensus             TTAACGGTTTCCCCGCTACTGCTATACATGGTGATAGGACACAACAGGAAAGAGAACAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           CTTTGAGGGCTTTCAAAAGTGGCAGGACGCCGATTCTGGTTGCAACAGACGTGGCGGCAC
rJMFF040I13+                                          ATTCTGGTTGCAACAGACGTGGCGGCAC
rJMFF012K07+          CTTTGAGGGCTTTCAAAAGTGGCAGGACGCCGATTCTGGTTGCAACAGACGTGGCGGCAC
rJMSF031J19+                         AAAGTGGCAGGACGCCGATTCTGGTTGCAACAGACGTGGCGGCAC
                      ____________________________________________________________
consensus             CTTTGAGGGCTTTCAAAAGTGGCAGGACGCCGATTCTGGTTGCAACAGACGTGGCGGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           GTGGTCTCGACATTCCTCACGTTGCTCACGTGGTCAACTTCGACCTCCCAAATGACATTG
rJMFF040I13+          GTGGTCTCGACATTCCTCACGTTGCTCACGTGGTCAACTTCGACCTCCCAAATGACATTG
rJMFF041P22+                       TCCTCACGTTGCTCACGTGGTCAACTTCGACCTCCCAAATGACATTG
rJMFF012K07+          GTGGTCTCGACATTCCTCACGTTGCTCACGTGGTCAACTTCGACCTCCCAAATGACATTG
rJMSF031J19+          GTGGTCTCGACA-TCCTCACGTTGCTCACGTGGTCAACTTCGACCTCCCAAATGACATTG
                      ____________________________________________________________
consensus             GTGGTCTCGACATTCCTCACGTTGCTCACGTGGTCAACTTCGACCTCCCAAATGACATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           ACGATTATGTCCACCGCATAGGAAGAACTGGACGAGCAGGAAAAACCGGCCTGGCCACCG
rJMFF040I13+          ACGATTATGTCCACCGCATAGGAAGAACTGGACGAGCAGGAAAAACCGGCCTGGCCACCG
rJMFF041P22+          ACGATTATGTCCACCGCATAGGAAGAACTGGACGAGCAGGAAAAACCGGCCTGGCCACCG
rJMFF012K07+          ACGATTATGTCCACCGCATAGGAAGAACTGGACGAGCAGGAAAAACCGGCCTGGCCACCG
rJMSF031J19+          ACGATTATGTCCACCGCATAGGAAGAACTGGACGAGCAGGAAAAACCGGCCTGGCCACCG
                      ____________________________________________________________
consensus             ACGATTATGTCCACCGCATAGGAAGAACTGGACGAGCAGGAAAAACCGGCCTGGCCACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           CCTTCTTCAACGAGGGCAATTCCTCTCTCGCGCGCTCCTTGGCAGATCTGATGCAAGAAG
rJMFF040I13+          CCTTCTTCAACGAGGGCAATTCCTCTCTCGCGCGCTCCTTGGCAGATCTGATGCAAGAAG
rJMFF041P22+          CCTTCTTCAACGAGGGCAATTCCTCTCTCGCGCGCTCCTTGGCAGATCTGATGCAAGAAG
rJMFF014B13+               TTCAACGAGGGCAATTCCTCTCTCGCGCGCTCCTTGGCAGATCTGATGCAAGAAG
rJMFF012K07+          CCTTCTTCAACGAGGGCAATTCCTCTCTCGCGCGCTCCTTGGCAGATCTGATGCAAGAAG
rJMSF031J19+          CCTTCTTCAACGAGGGCAATTCCTCTCTCGCGCGCTCCTTGGCAGATCTGATGCAAGAAG
                      ____________________________________________________________
consensus             CCTTCTTCAACGAGGGCAATTCCTCTCTCGCGCGCTCCTTGGCAGATCTGATGCAAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           CAAACCAAGAAGTACCTGCCTGGCTTTCCCGCTATGCTGCTAGATCCTCCCACGGAGGCA
rJMFF040I13+          CAAACCAAGAAGTACCTGCCTGGCTTTCCCGCTATGCTGCTAGATCCTCCCACGGAGGCA
rJMFF041P22+          CAAACCAAGAAGTACCTGCCTGGCTTTCCCGCTATGCTGCTAGATCCTCCCACGGAGGCA
rJMFF014B13+          CAAACCAAGAAGTACCTGCCTGGCTTTCCCGCTATGCTGCTAGATCCTCCCACGGAGGCA
rJMFF012K07+          CAAACCAAGAAGTACCTGCCTGGCTTTCCCGCTATGCTGCTAGATCCTCCCACGGAGGCA
JMFS150F10-             AACCAAGAAGTACCTGCCTGGCTTTCCCGCTATGCTGCTAGATCCTCCCACGGAGGCA
rJMSF031J19+          CAAACCAAGAAGTACCTGCCTGGCTTTCCCGCTATGCTGCTAGATCCTCCCACGGAGGCA
rJMFF050K11+                                                                 AGGCA
                      ____________________________________________________________
consensus             CAAACCAAGAAGTACCTGCCTGGCTTTCCCGCTATGCTGCTAGATCCTCCCACGGAGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
rJMFF040I13+          AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
rJMFF041P22+          AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
rJMFF014B13+          AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
rJMFF012K07+          AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
JMFS150F10-           AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
rJMSF031J19+          AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
rJMFF047P10+                     GGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
rJMFF050K11+          AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
                      ____________________________________________________________
consensus             AAAGCCGCCGGGGTGCCGGCCGCTTCGGCGGCCGTGATTTCCGAAGAGATTCCTCTTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
rJMFF040I13+          CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
rJMFF041P22+          CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
rJMFF014B13+          CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
rJMFF012K07+          CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
JMFS150F10-           CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
rJMSF031J19+          CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
rJMFF047P10+          CTTTCAACCGAGGCAATCCCGACTATTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
rJMFF050K11+          CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
                      ____________________________________________________________
consensus             CTTTCAACCGAGGCAATCCCGACTACTACTCTGGCGGCAACACGGGCGGCGGTTACAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
rJMFF040I13+          GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
rJMFF041P22+          GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
rJMFF014B13+          GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
rJMFF012K07+          GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
JMFS150F10-           GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
rJMSF031J19+          GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
rJMFF047P10+          GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
rJMFF050K11+          GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
                      ____________________________________________________________
consensus             GGTTCGGGGGCGGGTACAATCCATCGTACGGAGCTGGCGTGGCCAGCGCCTGGGACTAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN004D24-           AGCCCACCCACACTTGATCAATCTGGC                                 
rJMFF040I13+          AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
rJMFF041P22+          AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
rJMFF014B13+          AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
rJMFF012K07+          AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
JMFS150F10-           AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
rJMSF031J19+          AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
rJMFF047P10+          AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
rJMFF050K11+          AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
                      ____________________________________________________________
consensus             AGCCCACCCACACTTGATCAATCTGGCAACAGAAGTTAGTAGTAGAATACACTTCCTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040I13+          TTTTTAGATATTTTATCGTGTTCTTTTCGTCTTTGTCGTCGTTCGTCATGGAATTGAAGC
rJMFF041P22+          TTTTTAGATATTTTATCGTGTTCTTTTCGTCTTTGTCGTCGTTCGTCATGGAATTGAAGC
rJMFF014B13+          TTTTTAGATATTTTATCGTGTTCTTTTCGTCTTTGTCGTCGTTCGTCATGGAATTGAAGC
rJMSF040A21+                                                      GTCATGGAATTGAAGC
rJMFF012K07+          TTTTTAGATATTTTATCGTGTTCTTTTCGTCTTTGTCGTCGTTCGTCATGGAATTGAAGC
JMFS150F10-           TTTTTAGATATTTTATCGTGTTCTTTTCGTCTTTGTCGTCGTTCGTCATGGAATTGAAGC
rJMSF031J19+          TTTTTAGATATTTTATCGTGTTCTTTTCGTCTTTGTCGTCGTTCGTCATGGAATTGAAGC
rJMFF047P10+          TTTTAAGATATTTTATCGTGTTCTTTTCGTCTTGGTCGTCGTTCGTCATGGAATTGAAGC
rJMFF050K11+          TTTTTAGATATTTTATCGTGTTCTTTTCGTCTTTGTCGTCGTTCGTCATGGAATTGAAGC
                      ____________________________________________________________
consensus             TTTTTAGATATTTTATCGTGTTCTTTTCGTCTTTGTCGTCGTTCGTCATGGAATTGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040I13+          TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
rJMFF041P22+          TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
rJMFF014B13+          TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
rJMSF040A21+          TTATANTTCGTCNTCCTTTTTGTACTGGAACTTTTGACCTTAAAGATNGGTGGTNTGANG
rJMFF012K07+          TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
JMFS150F10-           TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
rJMSF031J19+          TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
rJMFF047P10+          TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
rJMFF050K11+          TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
                      ____________________________________________________________
consensus             TTCTACTTCGTCTTCCTTTTTGTACTGGAATTTTTGACCTTAAAGATGGGTGGTGTGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040I13+          GAGAGTATTGTAATCA-CTGGGCTCCATGGGTATGTGTAAATGTTGGCAGGAGGCATGAA
rJMFF041P22+          GAGAGTATTGT                                                 
rJMFF014B13+          GAGAGTATTGTAATCA-CTGGGCTCCATGGGTATGTGTAAATGTTGGCAGGAGGCATGAA
rJMSF040A21+          GAGAGNATAGTAATCATCTGGGCTCCATGGGTATGTGTAAATG                 
rJMFF012K07+          GAGAGTATTGTAATCA-CTGGGCTCCATGGGTATGTGTAAATGTTGGCAGGAGGCATGAA
JMFS150F10-           GAGAGTATTGTAATCA-CTGGGCTCCATGGGTATGTGTAACTGTTGGCAGGAGGCATGAA
rJMSF031J19+          GAGAGTATTGTAATCA-CTGGGCTCCATGGGTATGTGTAAATGTTGGCAGGAGGCATGAA
rJMFF047P10+          GAGAGTATTGTAATCA-CTGGGCTCCATGGGTATGTGTAAATGTTGGCAGGAGGCATGAA
rJMFF050K11+          GAGAGTATTGTAATCA-CTGGGCTCCATGGGTATGTGTAAATGTTGGCAGGAGGCATGAA
                      ____________________________________________________________
consensus             GAGAGTATTGTAATCA-CTGGGCTCCATGGGTATGTGTAAATGTTGGCAGGAGGCATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF040I13+          TAATCTGCTAACAACTT                                           
rJMFF014B13+          TAATCTGCTA                                                  
rJMFF012K07+          TAATCTGCTAACAACTTCTTAAGGTGTATGTAATC                         
JMFS150F10-           TAATCTGCTAACAACTTCTTAAGGTGTATGTAATCT                        
rJMSF031J19+          TAATCTGCTAACAACTTCTTAAGGTGTATGTAATCTTTGCCTT                 
rJMFF047P10+          TAATCTGCTAACAACTTCTTAAGGTGTATGTAATCTTTGCCTTTAACTTATCATCCCATT
rJMFF050K11+          TAATCTGCTAACAACTTCTTAAGGTGTATGTAATCTTTGCCTTTAACTTATCATCCCATT
                      ____________________________________________________________
consensus             TAATCTGCTAACAACTTCTTAAGGTGTATGTAATCTTTGCCTTTAACTTATCATCCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF047P10+          TCATCTTTGAC                                                 
rJMFF050K11+          TCATCTTTGACATTTGATTTCAAGGATTATGCTTAGTCTCTTAAAAAAAAAAAAAAAAAT
                      ____________________________________________________________
consensus             TCATCTTTGACATTTGATTTCAAGGATTATGCTTAGTCTCTTAAAAAAAAAAAAAAAAAT