Contig 004163:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF010I18+                                                             GGAGGGGCA
                      ____________________________________________________________
consensus                                                                GGAGGGGCA
 
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rJMFF010I18+          TTTCTCGATAAAAGGCGCCCAAAAAGCAGCGCAATTGGCAGCCCGGTGCCTCAGCCGAGA
                      ____________________________________________________________
consensus             TTTCTCGATAAAAGGCGCCCAAAAAGCAGCGCAATTGGCAGCCCGGTGCCTCAGCCGAGA
 
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rJMFF010I18+          CCCGAAAGCCAGACCTATGATGAGCGAGGTTGTCGAGGCGTTGAANCCGCTGCCGAACCT
rJMFF050C02+                                                  TTGAAGCCGCTGCCGAACCT
                      ____________________________________________________________
consensus             CCCGAAAGCCAGACCTATGATGAGCGAGGTTGTCGAGGCGTTGAAGCCGCTGCCGAACCT
 
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rJMFF010I18+          CAAGGACATGGCGAGCTCGTCCTACTATTTCCAGACCATGCAAGTNGACCNCCGCATCGG
rJMFF028J07+                                                                  TCGG
rJMFF050C02+          CAAGGACATGGCGAGCTCGTCCTACTATTTCCAGACCATGCAAGTCGACCACCGCATCGG
                      ____________________________________________________________
consensus             CAAGGACATGGCGAGCTCGTCCTACTATTTCCAGACCATGCAAGTCGACCACCGCATCGG
 
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rJMFF010I18+          GTNGAGCCCGAACGCGAGAAATGGCGGCGGTGGCGGCAGAGTGCCGCCCCCGTCGTTNGC
rJMFF028J07+          GTNGAGCCCGAACGCGAGAAATGGCGGCGGTGGCGGCAGAGTGCCNCCCCCGTCGTTNGC
rJMFF050C02+          GTCGAGCCCGAACGCGAGAAATGGCGGCGGTGGCGGCAGAGTGCCGCCCCCGTCGTTCGC
                      ____________________________________________________________
consensus             GTCGAGCCCGAACGCGAGAAATGGCGGCGGTGGCGGCAGAGTGCCGCCCCCGTCGTTCGC
 
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rJMFF010I18+          CAAGAACGGTGGCGGACAGCAGCAGCNCCCGAGGAGCCTGTNGATACCAAACGGCTCCTC
rJMFF028J07+          CAAGAACGGTGGCGGNCAACAGCAGCNCCCGAGGAGCCTGTCGATACCAAACGGNTCCTC
rJMFF050C02+          CAAGAACGGTGGCGGACAGCAGCAGCACCCGAGGAGCCTGTCGATACCAAACGGCTCCTC
                      ____________________________________________________________
consensus             CAAGAACGGTGGCGGACAGCAGCAGCACCCGAGGAGCCTGTCGATACCAAACGGCTCCTC
 
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rJMFF010I18+          ACTTACTTCCCCCTNCCATCACCATCAGTTTNTGCAGAATTCACCAAAACCAAATGGCAA
rJMFF028J07+          ACTTNCTTCCCCCTACCATCACCATCAGTTTTTGCAGAATTCACCAAAACCAAATGGCAA
rJMFF050C02+          ACTTACTTCCCCCTACCATCACCATCAGTTTCTGCAGAATTCACCAAAACCAAATGGCAA
                      ____________________________________________________________
consensus             ACTTACTTCCCCCTACCATCACCATCAGTTTTTGCAGAATTCACCAAAACCAAATGGCAA
 
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rJMFF010I18+          AGCTTAGAATTGGATTGGCAGTTGACTCATNTCCNCCATTNTTTATNTCTNTCTNTCACC
rJMFF028J07+          AGNTTAGAATTGGATTGGCAGTTGACTCATNTCCNCCATTNTTTATNTNTNTNTNTCACC
rJMFF050C02+          AGCTTAGAATTGGATTGGCAGTTGACTCATCTCCACCATTCTTTATCTCTCTCTCTCACC
                      ____________________________________________________________
consensus             AGCTTAGAATTGGATTGGCAGTTGACTCATCTCCACCATTCTTTATCTCTCTCTCTCACC
 
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rJMFF010I18+          CAAATTATGAAGATGCCTTTTGTTTGGCCAGCTGGCAAAGGAAGAAAATCAGGTTTTATT
rJMFF028J07+          CAAATTATGAAGATGCCTTTTGTTTGGCCAGCTGGCAAAGGAAGAAAATCAGGTTTTATT
rJMFF050C02+          CAAATTATGAAGATGCCTTTTGTTTGGCCAGCTGGCAAAGGAAGAAAATCAGGTTTTATT
                      ____________________________________________________________
consensus             CAAATTATGAAGATGCCTTTTGTTTGGCCAGCTGGCAAAGGAAGAAAATCAGGTTTTATT
 
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rJMFF010I18+          TTTTTCTTTTTCTTTAAATTTTCTTTTCTTTAAAAAAAAAAATCTGTTGAGACTGGTGAA
rJMFF028J07+          TTTTTCTTTTTCTTTAAATTTTCTTTTCTTTAAAAAAAAAAATCTGTTGAGACTGGTGAA
rJMFF050C02+          TTTTTCTTTTTCTTTAAATTTTCTTTTCTTTAAAAAAAAAAATCTGTTGAGACTGGTGAA
                      ____________________________________________________________
consensus             TTTTTCTTTTTCTTTAAATTTTCTTTTCTTTAAAAAAAAAAATCTGTTGAGACTGGTGAA
 
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rJMFF010I18+          CTCCCCCTGGAAATGATTGTAATGTAAGCAGAGCTAAAGTGTCCATGGAGTAAATATTTT
rJMFF028J07+          CTCCCCCTGGAAATGATTGTAATGTAAGCAGAGCTAAAGTGTCCATGGAGTAAATATTTT
rJMFF050C02+          CTCCCCCTGGAAATGATTGTAATGTAAGCAGAGCTAAAGTGTCCATGGAGTAAATATTTT
                      ____________________________________________________________
consensus             CTCCCCCTGGAAATGATTGTAATGTAAGCAGAGCTAAAGTGTCCATGGAGTAAATATTTT
 
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rJMFF010I18+          GTATGTTAATATA                                               
rJMFF028J07+          GTATGTTAATATA                                               
rJMFF050C02+          GTATGTTAATATATGAGCTCTCATGTGGTGATTAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             GTATGTTAATATATGAGCTCTCATGTGGTGATTAAAAAAAAAAAAAAAACTCTCCAGGGT