Contig 004162:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012M16Sequence521013382 (9)ref|XP_006347390.1|199PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]685004162 (8)ref|XP_002525667.1|1e-19conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMFF025C13Sequence441013382 (9)ref|XP_006347390.1|111PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]711004162 (8)ref|XP_002525667.1|2e-33conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMFF045F06Sequence627013382 (9)ref|XP_006347390.1|162PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]596004162 (8)emb|CDP18515.1|1e-10unnamed protein product [Coffea canephora]
JMFF046A04Sequence571013382 (9)ref|XP_006347390.1|219PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]563004162 (8)ref|XP_002525667.1|1e-10conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMFF050B04Sequence630013382 (9)ref|XP_006347390.1|197PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]633004162 (8)ref|XP_002525667.1|1e-10conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMFF050K06Sequence574013382 (9)ref|XP_006347390.1|217PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]596004162 (8)emb|CDP18515.1|1e-10unnamed protein product [Coffea canephora]
JMSF025P13Sequence693013382 (9)ref|XP_006347390.1|236PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]739004162 (8)ref|XP_002525667.1|1e-43conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot
JMSF037G17Sequence623013382 (9)ref|XP_006347390.1|118PREDICTED: uncharacterized protein LOC102602040 [Solanum tuberosum]695004162 (8)ref|XP_002525667.1|4e-34conserved hypothetical protein [Ricinus communis] gb|EEF36785.1| conserved hypot

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF025P13+ GTTGGAGAGCATAGGATTACAAGTGGACATATTGCTTTGTTCCTA
                      ____________________________________________________________
consensus GTTGGAGAGCATAGGATTACAAGTGGACATATTGCTTTGTTCCTA
 
. : . : . : . : . : . :
rJMSF037G17+ TTAGTCGGTTTAAGACTGCAATCCGTGAAACTTTGGTGCTACCAAACTGTGAAAGTGTA
rJMSF025P13+ ATTAGTCGGTTTAAGACTGCAATCCGTGAAACTTTGGTGCTACCAAACTGTGAAAGTGTA
rJMFF025C13+ TTAGTCGGTTTAAGACTGCAATCCGTGAAACTTTGGTGCTACCAAACTGTGAAAGTGTA
rJMFF012M16+ GGTGCTACCAAACTGTGAAAGTGTA
                      ____________________________________________________________
consensus ATTAGTCGGTTTAAGACTGCAATCCGTGAAACTTTGGTGCTACCAAACTGTGAAAGTGTA
 
. : . : . : . : . : . :
rJMSF037G17+ AGCCTGGGTTGGATGTTAGCAGAAAAGGAAGA-CTGGGTCCCTAGCAAAGTTGCTCCATT
rJMSF025P13+ AGCCTGGGTTGGATGTTAGCAGAAAAGGAAGA-CTGGGTCCCTAGCAAAGTTGCTCCATT
rJMFF025C13+ AGCCTGGGTTGGATGTTAGCAGAAAAGGAAGA-CTGGGTCCCTAGCAAAGTTGCTCCATT
rJMFF012M16+ AGCCTGGGTTGGATGTTAGCAGAAAAGGAAGACCTGGGTCCCAAGCAAAGTTGCTCCATT
                      ____________________________________________________________
consensus AGCCTGGGTTGGATGTTAGCAGAAAAGGAAGA-CTGGGTCCCTAGCAAAGTTGCTCCATT
 
. : . : . : . : . : . :
rJMSF037G17+ CATATGGATTAATAATCAAGAAGTGGCAAGCACTGAGCACGAGGAAGCTAAACATTTGGA
rJMSF025P13+ CATATGGATTAATAATCAAGAAGTGGCAAGCACTGAGCACGAGGAAGCTAAACATTTGGA
rJMFF025C13+ CATATGGATTAATAATCAAGAAGTGGCAAGCACTGAGCACGAGGAAGCTAAACATTTGGA
rJMFF012M16+ CATATGGATTAATAATCAAGAAGTGGCAAGCACTGAGCACGAGGAAGCTAAACATTTGGA
rJMFF050K06+ AAACATTTGGA
rJMFF045F06+ AAACATTTGGA
rJMFF050B04+ GGCAAGCACTGAGCACGAGGAAGCTAAACATTTGGA
                      ____________________________________________________________
consensus CATATGGATTAATAATCAAGAAGTGGCAAGCACTGAGCACGAGGAAGCTAAACATTTGGA
 
. : . : . : . : . : . :
rJMSF037G17+ TGAAGCTAATAGAGAAAGTGGCAGCAGCGATCAAGAGGGAATACAGGAAGGATGGAACAA
rJMSF025P13+ TGAAGCTAATAGAGAAAGTGGCAGCAGCGATCAAGAGGGAATACAGGAAGGATGGAACAA
rJMFF025C13+ TGAAGCTAATAGAGAAAGTGGCAGCAGCGATCAAGAGGGAATACAGGAAGGATGGAACAA
rJMFF012M16+ TGAAGCTAATAGAGAAAGTGGCAGCAGCGATCAAGAGGGAATACAGGAAGGATGGAACAA
rJMFF050K06+ TGAAGCTAATAGAGAAAGTGGCAGCAGCGATCAAGAGGGAATACAGGAAGGATGGAACAA
rJMFF045F06+ TGAAGCTAATAGAGAAAGTGGCAGCAGCGATCAAGAGGGAATACAGGAAGGATGGAACAA
rJMFF046A04+ GGAATACAGGAAGGATGGAACAA
rJMFF050B04+ TGAAGCTAATAGAGAAAGTGGCAGCAGCGATCAAGAGGGAATACAGGAAGGATGGAACAA
                      ____________________________________________________________
consensus TGAAGCTAATAGAGAAAGTGGCAGCAGCGATCAAGAGGGAATACAGGAAGGATGGAACAA
 
. : . : . : . : . : . :
rJMSF037G17+ CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
rJMSF025P13+ CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
rJMFF025C13+ CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
rJMFF012M16+ CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
rJMFF050K06+ CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
rJMFF045F06+ CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
rJMFF046A04+ CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
rJMFF050B04+ CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
                      ____________________________________________________________
consensus CAGTGGATCACCTTTACAAGAAGCACCAAATGATTGTTTGGACCCTAAAGACCAGTCAAC
 
. : . : . : . : . : . :
rJMSF037G17+ GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
rJMSF025P13+ GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
rJMFF025C13+ GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
rJMFF012M16+ GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
rJMFF050K06+ GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
rJMFF045F06+ GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
rJMFF046A04+ GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
rJMFF050B04+ GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
                      ____________________________________________________________
consensus GATGAAGAGTAGTGTGAAAGAATTGCAAGCCCCTTTGTTGACTTGTGAAGAACAGCAGGA
 
. : . : . : . : . : . :
rJMSF037G17+ GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
rJMSF025P13+ GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
rJMFF025C13+ GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
rJMFF012M16+ GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
rJMFF050K06+ GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
rJMFF045F06+ GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
rJMFF046A04+ GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
rJMFF050B04+ GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
                      ____________________________________________________________
consensus GTGTGAACGCAGCAGCAGCAGCTCAGAGAAGGTGGAATGTTACTCATCACCATCTCGACC
 
. : . : . : . : . : . :
rJMSF037G17+ ACTGGAGGAATATCATATTGCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
rJMSF025P13+ ACTGGAGGAATATCATATTTCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
rJMFF025C13+ ACTGGAGAAATATCATATTGCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
rJMFF012M16+ ACTGGAGGAATATCATATTGCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
rJMFF050K06+ ACTGGAGGAATATCATATTGCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
rJMFF045F06+ ACTGGAGGAATATCATATTGCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
rJMFF046A04+ ACTGGAGGAATATCATATTGCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
rJMFF050B04+ ACTGGAGAAATATCATATTGCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
                      ____________________________________________________________
consensus ACTGGAGGAATATCATATTGCAGAACCAAAACGAATGGGATTGGGATCGACCAGAGCAAA
 
. : . : . : . : . : . :
rJMSF037G17+ GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
rJMSF025P13+ GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
rJMFF025C13+ GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
rJMFF012M16+ GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
rJMFF050K06+ GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
rJMFF045F06+ GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
rJMFF046A04+ GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
rJMFF050B04+ GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
                      ____________________________________________________________
consensus GATGCTTGGGCTGAGCAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAGACGTCATATTGA
 
. : . : . : . : . : . :
rJMSF037G17+ AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTAAACGAAAGAAAATAC
rJMSF025P13+ AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTAAACGAAAGAAAATAC
rJMFF025C13+ AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTAAACGAAAGAAAATAC
rJMFF012M16+ AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTGAACGAAAGAAAATAC
rJMFF050K06+ AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTAAACGAAAGAAAATAC
rJMFF045F06+ AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTAAACGAAAGAAAATAC
rJMFF046A04+ AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTGAACGAAAGAAAATAC
rJMFF050B04+ AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTAAACGAAAGAAAATAC
                      ____________________________________________________________
consensus AGAAAAGGGAAGGCACATTGTTGAAAAGATGAGAGGACAACAGTAAACGAAAGAAAATAC
 
. : . : . : . : . : . :
rJMSF037G17+ AAAAAGCCCCCCTTCCCTTGTATGTTAACACATCTGATATTTGATTGGTAAATTGAGTTG
rJMSF025P13+ AAAAAGCCCCCCTTCCCTTGTATGTTAACACATCTGATATTTGATTGGTAAATTGTGTTG
rJMFF025C13+ AAAAAGCCCCCCTTCCCTTGTATGTTAACACATCTGATATTTGATTGGTAAATTGAGTTG
rJMFF012M16+ AAAAAGCCCCCCTTCCCTTGTATGTTAACACATCTGATATTTGATTGGTAAATTGAGTTG
rJMFF050K06+ AAAAAGCCCCCCTTCCCTTGTATGTTAACACATCTGATATTTGATTGGTAAATTGAGTTG
rJMFF045F06+ AAAAAGCCCCCCTTCCCTTGTATGTTAACACATCTGATATTTGATTGGTAAATTGAGTTG
rJMFF046A04+ AAAAAGCCCCCCTTCCCTTGTATGTTAACACATTTGATATTTGATTGGTAAATTGAGTTG
rJMFF050B04+ AAAAAGCCCCCCTTCCCTTGTATGTTAACACATCTGATATTTGATTGGTAAATTGAGTTG
                      ____________________________________________________________
consensus AAAAAGCCCCCCTTCCCTTGTATGTTAACACATCTGATATTTGATTGGTAAATTGAGTTG
 
. : . : . : . : . : . :
rJMSF037G17+ TAATTTTGCAGTGCAGTGCAGGAAATGATTGATT
rJMSF025P13+ TAATTTTGCAGTGCAGTGCAGGAAATGATTGATTT
rJMFF025C13+ TAATTTTGCAGTGCAGTGCAGGAAATGATTGATTTATATCTCAACTTAATAGA
rJMFF012M16+ TAATTTTGCAGTGCAGTGCAGGAAATGATTGATTTATATCTCAACTTAATAGATTTCAAC
rJMFF050K06+ TAATTTTGCAGTGCAGTGCAGGAAATGATTGATTTATATCTCAACTTAATAGATTTCAAC
rJMFF045F06+ TAATTTTGCAGTGCAGTGCAGGAAATGATTGATTTATATCTCAACTTAATAGATTTCAAC
rJMFF046A04+ TAATTTTGCAGTGCAGTGCAGGAAATGATTGATTTATATCTCAACTTAATAGATTTCAAC
rJMFF050B04+ TAATTTTGCAGTGCAGTGCAGGAAATGATTGATTTATATCTCAACTTAATAGATTTCAAC
                      ____________________________________________________________
consensus TAATTTTGCAGTGCAGTGCAGGAAATGATTGATTTATATCTCAACTTAATAGATTTCAAC
 
. : . : . : . : . : . :
rJMFF050K06+ ATCTTTCGTTTAGAGTACGAAAAAAAAAAAAA
rJMFF045F06+ ATCTTTCGTTTAGAGTACGAAAAAAAAAAAAA
rJMFF046A04+ ATCTTTCGTTTAGAGTACGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
rJMFF050B04+ ATCTTTCGTTTAGAGTA---AAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus ATCTTTCGTTTAGAGTACGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG