Contig 004160:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034O24Sequence560004160 (8)gb|EYU22033.1|2e-90hypothetical protein MIMGU_mgv1a015529mg [Erythranthe guttata]659004160 (8)gb|EYU22033.1|6e-90hypothetical protein MIMGU_mgv1a015529mg [Erythranthe guttata]
JMFF034P11Sequence659004160 (8)gb|EYU22033.1|6e-90hypothetical protein MIMGU_mgv1a015529mg [Erythranthe guttata]
JMFF034P24Sequence469004160 (8)ref|XP_004965723.1|1e-76PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Setaria italica]639004160 (8)gb|EYU22033.1|5e-90hypothetical protein MIMGU_mgv1a015529mg [Erythranthe guttata]
JMFF050A07Sequence649004160 (8)gb|EYU22033.1|6e-90hypothetical protein MIMGU_mgv1a015529mg [Erythranthe guttata]560004160 (8)gb|EYU22033.1|6e-74hypothetical protein MIMGU_mgv1a015529mg [Erythranthe guttata]
JMFN043H07Sequence573004160 (8)gb|EYU22033.1|4e-88hypothetical protein MIMGU_mgv1a015529mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFF034O24-                                             TGTATATCTTCCTCTCTGCGTTTGGG
rJMFF034P24+                                            TGTATATCTTCCTCTCTGCGTTTGGG
rJMFF034O24+                                            TGTATATCTTCCTCTCTGCGTTTGGG
JMFF034P24-                                             TGTATATCTTCCTCTCTGCGTTTGGG
rJMFF034P11+                                            TGTATATCTTCCTCTCTGCGTTTGGN
                      ____________________________________________________________
consensus                                               TGTATATCTTCCTCTCTGCGTTTGGG
 
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JMFF034O24-           TTCCTGCGTGGTGCTGTGGTCGAATCAATACAGAAATGCAGATCTTTGTCAAAACCCTAA
rJMFF034P24+          TTCCTGCGTGGTGCTGTGGTCGAATCAATACAGAAATGCAGATCTTTGTCAAAACCCTAA
rJMFF034O24+          TTCCTGCGTGGTGCTGTGGTCGAATCAATACAGAAATGCAGATCTTTGTCAAAACCCTAA
JMFF050A07-                                              ATGCAGATCTTTGTCAAAACCCTAA
JMFN043H07-                                                      CTTTGTCAAAACCCTAA
JMFF034P24-           TTCCTGCGTGGTGCTGTGGTCGAATCNATACAGAAATGCAGATCTTTGTCAAAACCCTAA
rJMFF034P11+          TTCCTGCGTGGTGCTGTGGTCGAATCAATACAGAAATGCAGATCTTTGTCAAAACCCTAA
                      ____________________________________________________________
consensus             TTCCTGCGTGGTGCTGTGGTCGAATCAATACAGAAATGCAGATCTTTGTCAAAACCCTAA
 
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JMFF034O24-           CCGGAAAGACTATCACTCTCGAAGTCGAGAGTAGCGACACCATCGACAATGTCAAGGCCA
rJMFF034P24+          CCGGAAAGACTATCACTCTCGAAGTCGAGAGTAGCGACACCATCGACAATGTCAAGGCCA
rJMFF034O24+          CCGGAAAGACTATCACTCTCGAAGTCGAGAGTAGCGACACCATCGACAATGTCAAGGCCA
JMFF050A07-           CCGGAAAGACTATCACTCTCGAAGTCGAGAGTAGCGACACCATCGACAATGTCAAGGCCA
JMFN043H07-           CCGGAAAGACTATCACTCTCGAAGTCGAGAGTAGCGACACCATCGACAATGTCAAGGCCA
JMFF034P24-           CCGGAAAGACTATCACTCTCGAAGTCGAGAGTAGCGACACCATCGACAATGTCAAGGCCA
rJMFF034P11+          CCGGAAAGACTATCACTCTCGAAGTCGAGAGTAGCGACACCATCGACAATGTCAAGGCCA
rJMFF050A07+                                                  CATCGACAATGTCAAGGCCA
                      ____________________________________________________________
consensus             CCGGAAAGACTATCACTCTCGAAGTCGAGAGTAGCGACACCATCGACAATGTCAAGGCCA
 
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JMFF034O24-           AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
rJMFF034P24+          AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
rJMFF034O24+          AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
JMFF050A07-           AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
JMFN043H07-           AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
JMFF034P24-           AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
rJMFF034P11+          AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
rJMFF050A07+          AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
                      ____________________________________________________________
consensus             AGATTCAGGACAAAGAAGGTATCCCCCCTGATCAGCAGAGACTGATTTTTGCTGGCAAAC
 
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JMFF034O24-           AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
rJMFF034P24+          AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
rJMFF034O24+          AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
JMFF050A07-           AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
JMFN043H07-           AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
JMFF034P24-           AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
rJMFF034P11+          AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
rJMFF050A07+          AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
                      ____________________________________________________________
consensus             AGTTGGAAGATGGAAGGACTCTGGCTGATTACAACATCCAGAAGGAATCAACACTTCACC
 
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JMFF034O24-           TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
rJMFF034P24+          TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
rJMFF034O24+          TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
JMFF050A07-           TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
JMFN043H07-           TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
JMFF034P24-           TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
rJMFF034P11+          TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
rJMFF050A07+          TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
                      ____________________________________________________________
consensus             TGGTTTTGAGACTTAGGGGAGGGACTATGATTAAAGTGAAGACTCTCACTGGAAAGGAGA
 
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JMFF034O24-           TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
rJMFF034P24+          TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
rJMFF034O24+          TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
JMFF050A07-           TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
JMFN043H07-           TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
JMFF034P24-           TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
rJMFF034P11+          TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
rJMFF050A07+          TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
                      ____________________________________________________________
consensus             TTGAAATTGATATTGAGCCAACTGATACTATTGATAGGATTAAGGAGCGAGTTGAGGAGA
 
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JMFF034O24-           AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
rJMFF034P24+          AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
rJMFF034O24+          AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
JMFF050A07-           AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
JMFN043H07-           AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
JMFF034P24-           AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
rJMFF034P11+          AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
rJMFF050A07+          AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
                      ____________________________________________________________
consensus             AAGAAGGAATACCTCCTGTGCAACAAAGGCTTATCTATGCTGGCAAGCAGCTTGCAGATG
 
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JMFF034O24-           ACAAGACAGCTAAAGATTATAACATTGAAGGTGGTTCTGTTCTTCACCTTGTCCTAGCAC
rJMFF034P24+          ACAAGACAGCTAAAGATTATAACATTGAAGGTGGTTCTGTTCTTCACCTTGTCCTAGCAC
rJMFF034O24+          ACAAGACAGCTAAAGATTATAACATTGAAGGTGGTTCTGTTCTTCACCTTGTCCTAGCAC
JMFF050A07-           ACAAGACAGCTAAAGATTATAACATTGAAGGTGGTTCTGTTCTTCACCTTGTCCTAGCAC
JMFN043H07-           ACAAGACAGCTAAAGATTATAACATTGAAGGTGGTTCTGTTCTTCACCTTGTCCTAGCAC
JMFF034P24-           ACAAGACAGCTAAAGATTATAAC                                     
rJMFF034P11+          ACAAGACAGCTAAAGATTATAACATTGAAGGTGGTTCTGTTCTTCACCTTGTCCTAGCAC
rJMFF050A07+          ACAAGACAGCTAAAGATTATAACATTGAAGGTGGTTCTGTTCTTCACCTTGTCCTAGCAC
                      ____________________________________________________________
consensus             ACAAGACAGCTAAAGATTATAACATTGAAGGTGGTTCTGTTCTTCACCTTGTCCTAGCAC
 
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JMFF034O24-           TGAGGGGCGGCTGTTTTTAGATGTTCAACTTTTATTGGATGGATTTGCAGTAAA      
rJMFF034P24+          TGAGGGGCGGCTGTTTTTAGATGTTCAACTTTTATTGGATGGATTTGCAGTAAACAATTC
rJMFF034O24+          TGAGGGGCGGCTGTTTTTAGATGTTCAACTTTTATTGGATGGATTTGCAGTAAACAATTC
JMFF050A07-           TGAGGGGCGGCTGTTTTTAGATGTTCAACTTTTATTGGATGGATTTGCAGTANACAATTC
JMFN043H07-           TGAGGGGCGGCTGTTTTTAGATGTTCAACTTTTATTGGATGGATTTGCAGTANACAATTC
rJMFF034P11+          TGAGGGGCGGCTGTTTTTAGATGTTCAACTTTTATTGGATGGATTTGCAGTAAACAATTC
rJMFF050A07+          TGAGGGGCGGCTGTTTTTAGATGTTCAACTTTTATTGGATGGATTTGCAGTAAACAATTC
                      ____________________________________________________________
consensus             TGAGGGGCGGCTGTTTTTAGATGTTCAACTTTTATTGGATGGATTTGCAGTAAACAATTC
 
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rJMFF034P24+          GAGTTTTGATGTACTCTTGGATAATATGCACTTGTGGTTAAATACTCGAGTTTTGATGTA
rJMFF034O24+          GAGTTTTGATGTACTCTTGGATAATATGCACTTGTGGTTAAATACTCGAGTTTTGATGTA
JMFF050A07-           GAGTTTTGATGTACTCTTGGATAATATGCACTTGTGGTTNAATACTCGAGTTTTGATGTA
JMFN043H07-           GAGTTTTGATGTACTCTTGGATAATATGCACTTGTGGTTAAATACTCGAGTTTTGATGTA
rJMFF034P11+          GAGTTTTGATGTACTCTTGGATAATATGCACTTGTGGTTAAATACTCGAGTTTTGATGTA
rJMFF050A07+          GAGTTTTGATGTACTCTTGGATAATATGCACTTGTGGTTAAATACTCGAGTTTTGATGTA
                      ____________________________________________________________
consensus             GAGTTTTGATGTACTCTTGGATAATATGCACTTGTGGTTAAATACTCGAGTTTTGATGTA
 
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rJMFF034P24+          CTTTTGGATAATA                                               
rJMFF034O24+          CTTTTGGATAATATGCACTTCTGGTTAATTACT                           
JMFF050A07-           CTTTTGGA                                                    
rJMFF034P11+          CTTTTGGATAATATGCACTTCTGGTTAATTACT                           
rJMFF050A07+          CTTTTGGATAATATGCACTTCTGGTTAATTACTTGCATGTGTATTCTATAAAAAAAAAAG
                      ____________________________________________________________
consensus             CTTTTGGATAATATGCACTTCTGGTTAATTACTTGCATGTGTATTCTATAAAAAAAAAAG