Contig 004156:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015P18Sequence527002238 (10)572004156 (7)emb|CDP16729.1|3e-65unnamed protein product [Coffea canephora]
JMFF049I19Sequence391002238 (10)184004156 (7)
JMSF002O14Sequence249002238 (10)658004156 (7)emb|CDP16729.1|2e-85unnamed protein product [Coffea canephora]
JMSF023L02Sequence571002238 (10)668004156 (7)emb|CDP16729.1|3e-93unnamed protein product [Coffea canephora]
JMSF037D15Sequence538002238 (10)662004156 (7)emb|CDP16729.1|6e-90unnamed protein product [Coffea canephora]
JMSF043C02Sequence463002238 (10)730004156 (7)emb|CDP16729.1|2e-110unnamed protein product [Coffea canephora]
JMSF043F12Sequence547002238 (10)635004156 (7)emb|CDP16729.1|8e-79unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043C02+ TNTGCCAGCAGATGANTAATGCAGCACTGATAGCTGTTGC
                      ____________________________________________________________
consensus TNTGCCAGCAGATGANTAATGCAGCACTGATAGCTGTTGC
 
. : . : . : . : . : . :
rJMSF023L02+ ATTGCCCTAATTTCATTCGCTTTAGGTTGTGCACCCTTAACCCAACTGTGCCAGA
rJMSF037D15+ ATTGCCCTAATTTCATTCGCTTTAGGTTGTGCACCCTTAACCCAACTGTGCCAGA
rJMSF002O14+ ATTGCCCTAATTTCATTCGCTTTAGGTTGTGCACCCTTAACCCAACTGTGCCAGA
rJMSF043F12+ TGCCAGA
rJMSF043C02+ CAAGAATTGCCCTAATTTCATTCGCTTTAGGTTGTGCACCCTTAACCCAACTGTGCCAGA
                      ____________________________________________________________
consensus CAAGAATTGCCCTAATTTCATTCGCTTTAGGTTGTGCACCCTTAACCCAACTGTGCCAGA
 
. : . : . : . : . : . :
rJMSF023L02+ TGCAGTGACAATGCAGCCATTGGATGAGGGTTTTGGGGCAATTGTTCAATCATGCAAAGG
rJMSF037D15+ TGCAGTGACAATGCAGCCATTGGATGNGGGTTTTGGGGCAATTNTTCAATCATGCAAAGG
rJMSF002O14+ TGCAGTGACAATGCAGCCATTGGATGAGGGTTTTGGGGCAATTGTTCAATCATGCAAAGG
rJMSF043F12+ TGCAGTGACAATGCAGCCATTGGATGAGGGTTTTGGGGCAATTGTTCAATCATGCAAAGG
rJMSF043C02+ TGCAGTGACAATGCAGCCATTGGATGAGGGTTTTGGGGCAATTGTTCAATCATGCAAAGG
                      ____________________________________________________________
consensus TGCAGTGACAATGCAGCCATTGGATGAGGGTTTTGGGGCAATTGTTCAATCATGCAAAGG
 
. : . : . : . : . : . :
rJMSF023L02+ GCTTAAGNGGTTNTCCGTNTNTGGCCTTNTAACTGATCNGGTTTTCCTATACNTTGGTAT
rJMSF037D15+ GCTTAAGNGGTTNTCCGTNTTTGGCCTTNTAANTGATCAGGTTTTCCTATACNTTGGTAT
rJMSF002O14+ GCTTAAGNGGTTATCCGTTTNTGGCCTTTTAACTGATCAGGTTTTCCTATACATTGGTAT
rJMSF043F12+ GCTTAAGNGGTTATCCGTNTNTGGCCTTTTAACTGATCAGGTTTTCCTATACATTGGTAT
rJMSF043C02+ GCTTAAGAGGTTNTCCGTNTNTGGCCTTNTAACTGATCAGGTTTTCCTATACNTTGGTAT
rJMFF015P18+ TGGCCTTTTAACTGATCAGGTTTTCCTATACATTGGTAT
                      ____________________________________________________________
consensus GCTTAAGAGGTTATCCGTTTTTGGCCTTTTAACTGATCAGGTTTTCCTATACATTGGTAT
 
. : . : . : . : . : . :
rJMSF023L02+ GTATGCAGAGCAGCTTGAAATGCTNTCCATAGCCTTTGCTGGTAAGAGNGACAAGGGAAT
rJMSF037D15+ GTATGCAGAGCAGCTTGAAATGCTNTCCATAGCCTTTGCTGGTAAGAGNGACAAGGGAAT
rJMSF002O14+ GTATGCAGAGCAGCTTGAAATGCTNTCCATAGCCTTTGCTGGTAAGAGTGNCAAGGGAAT
rJMSF043F12+ GTATGCAGAGCAGCTTGAAATGCTNTCCATAGCCTTTGCTGGTAAGAGNGACAAGGGAAT
rJMSF043C02+ GTATGCAGAGCAGCTTGAAATGCTNTCCATAGCCTTTGCTGGTAAGAGTGACAAGGGAAT
rJMFF015P18+ GTATGCAGAGCAGCTTGAAATGCTTTCCATAGCCTTTGNTGGTAAGAGNGACAAGGGAAT
                      ____________________________________________________________
consensus GTATGCAGAGCAGCTTGAAATGCTTTCCATAGCCTTTGCTGGTAAGAGTGACAAGGGAAT
 
. : . : . : . : . : . :
rJMSF023L02+ GCTTTATNTTTTAAATGGATGCAAGAAACTAAAGAAGCTTGNGATCAGAGATAGCCCGTT
rJMSF037D15+ GCTTTATNTTTTAAATGGATGCAAGAAACTAAAGAAGCTTGNGATCAGAGATAGCCCGTT
rJMSF002O14+ GCTTTATNTTTTAAATGGATGCAAGAAACTAAAGAAGCTTGNGATCAGAGATAGCCCGTT
rJMSF043F12+ GCTTTATGTTNTAAATGGATGCAAGAAACTAAAGAAGCTTGNGATCAGAGATAGCCCGTT
rJMSF043C02+ GCTTTATGTTNTAAATGGATGCAAGAAACTAAAGAAGCTTGNGATCAGAGATAGCCCGTT
rJMFF015P18+ GCTTTATGTTTTAAATGGATGCAAGAAACTAAAGAAGCTTGNGATCAGAGATAGCCCGTT
                      ____________________________________________________________
consensus GCTTTATGTTTTAAATGGATGCAAGAAACTAAAGAAGCTTGNGATCAGAGATAGCCCGTT
 
. : . : . : . : . : . :
rJMSF023L02+ TGGTAATGCAGCNCTTNTAGCGGACGNGGGGAAGTNTGAAACAATGCGATCCCTTTGGAT
rJMSF037D15+ TGGTAATGCAGCNCTTNTAGCGGACGNGGGGAAGTNTGAAACAATGCGATCCCTTTGGAT
rJMSF002O14+ TGGTAATGCAGCNCTTNTAGCGGACGNGGGGAAGTNTGAAACAATGCGATCCCTTTGGAT
rJMSF043F12+ TGGTAATGCAGCNCTTNTAGCGGACGNGGGGAAGTNTGAAACAATGCGATCCCTTTGGAT
rJMSF043C02+ TGGTAATGCAGCNCTTNTAGCGGACGNGGGGAAGTATGAAACAATGCGATCCCTTTGGAT
rJMFF015P18+ TGGTAATGCAGCNCTTTTAGNGGACGNGGGGAAGTATGAAACAATGNGATCCCTTTGGAT
                      ____________________________________________________________
consensus TGGTAATGCAGCNCTTTTAGCGGACGNGGGGAAGTATGAAACAATGCGATCCCTTTGGAT
 
. : . : . : . : . : . :
rJMSF023L02+ GTCGTCCTGNGAAGTGACCCTCGGNGCNTGCAAGATTNTGGCCAAGAAGATGCCNAGACT
rJMSF037D15+ GTCGTCCTGNGAAGTGACCCTCGGNGCNTGCAAGATTNTGGCCAAGAAGATGCCAAGACT
rJMSF002O14+ GTCGTCCTGNGAAGTGACCCTCGGNGCNTGCAAGATTNTGGCCAAGAAGATGCCNAGACT
rJMSF043F12+ GTCGTCCTGNGAAGTGACCCTCGGNGCNTGCAAGATTNTGGCCAAGAAGATGCCNAGACT
rJMSF043C02+ GTCGTCCTGNGAAGTGACCCTCGGNGCNTGCAAGATTNTGGCCAAGAAGATGCCAAGACT
rJMFF015P18+ GTNGTCCTGNGAAGNGACCCTCGGNGCATGCAAGATTTTGGCCAAGAAGATGCCAAGACT
                      ____________________________________________________________
consensus GTCGTCCTGNGAAGTGACCCTCGGNGCATGCAAGATTTTGGCCAAGAAGATGCCAAGACT
 
. : . : . : . : . : . :
rJMSF023L02+ GAATGTGGAAATCATCAATGAGAGTGAGCNGGCAGAGACTAGCCNTGATGATGGGCNGAA
rJMSF037D15+ GAATGTGGAAATCNTCAATGNGAGTGAGCNGGCAGNGACTAGCCNTGATGATGGGCNGAA
rJMSF002O14+ GAATGTGGAAATCATCAATGNGAGTGAGCNGGCAGNGACTAGCCNTGATGATGGGCNGAA
rJMSF043F12+ GAATGTGGAAATCATCAATGAGAGTGAGCNGGCAGAGACTAGCCNTGATGATGGGCNGAA
rJMSF043C02+ GAATGTGGAAATCATCAATGAGAGTGAGCNGGCAGAGACTAGCCNTGATGATGGGCNGAA
rJMFF015P18+ GAATGTGGAAATCATCAATGNGAGNGAGCAGGCAGAGACTAGCCATGATGATGGGCAGAA
                      ____________________________________________________________
consensus GAATGTGGAAATCATCAATGAGAGTGAGCAGGCAGAGACTAGCCATGATGATGGGCAGAA
 
. : . : . : . : . : . :
rJMSF023L02+ GGTAGAGAAAATGTACTTGTACCGGACNTTGGCTGGGCCCNGGAAAGATGCCCCCGGCTT
rJMSF037D15+ GGTAGAGAAAATGTACTTGTACCGGACNTTGGCTGGGCCCNGGAAAGATGCCCCCGGCTT
rJMSF002O14+ GGTAGAGAAAATGTACTTGTACCGGNCNTTGGCTGGGCCCNGGAAAGATGCCCCNGGCTT
rJMSF043F12+ GGTAGNGAAAATGTACTTGTACCGGACNTTGGCTGGGCCCNGGAAAGATGCCCCNGGCTT
rJMSF043C02+ GGTAGAGAAAATGTACTTGTACCGGACNTTGGCTGGGCNCNGGAAAGATGCCCCCGGCTT
rJMFF015P18+ GGTAGAGAAAANGTACTTGTNCCGGACATTGGCTGGGCNCAGGAAAGATGCNCCAGGCTT
rJMFF049I19+ GGCTT
                      ____________________________________________________________
consensus GGTAGAGAAAATGTACTTGTACCGGACATTGGCTGGGCCCAGGAAAGATGCCCCCGGCTT
 
. : . : . : . : . : . :
rJMSF023L02+ TGTGTGGNCNCNATAGATGTGCCCCTTGTNTTCNTTGCTCCCNGCTGTTAATTGT-CNGG
rJMSF037D15+ TGTGTGGNCNCTATAGATGTGCCCCTTGTNTTCATTGCTCCCNGCTGTTAATTGT-CNGG
rJMSF002O14+ TGTGTGGACNCTATAGATGTGCCCCTTGTNTTCNTTGCTCCCNGCTGTTAATTGTCCNGG
rJMSF043F12+ TGTGTGGACNCTATAGATGTGCCCCTTGTNTTCNTTGCTCCCAGCTGTTAATTGT-CNGG
rJMSF043C02+ TGTGTGGNCNCTATAGATGTGCCCCTTGTNTTCATTGCTCCCAGCTGTTAATTGT-CNGG
rJMFF015P18+ TGTGNGGACNCTATAGANGNGCCCCTTGTTTTCATTGCTCCCAGCTGTTAATTGT-CAGG
rJMFF049I19+ TGTGTGGACACTATAGATGTGCACCTTGTCTTCTTTGCTCCCGGCTGTTAATTGT-CAGG
                      ____________________________________________________________
consensus TGTGTGGACACTATAGATGTGCCCCTTGTTTTCATTGCTCCCAGCTGTTAATTGT-CAGG
 
. : . : . : . : . : . :
rJMSF023L02+ GTAGTTTGATTAAGANCNGGAACTATTTTTTTTTTTTCTGATGGTGAATTATTTGTGCTT
rJMSF037D15+ GTAGTTTGATTAAGANCNGGAACTATTTTTTTTTTTTCTGATGGTGAATTATTTGTGCTT
rJMSF002O14+ GTAGTTTGATTAAGAACNGGAACTATTTTTTTTTTTTCTGATGGTGAATTATTTGTGCTT
rJMSF043F12+ GTAGTTTGATTAAGAACNGGAACTATTTTTTTTTTTTCTGATGGTGAATTATTTGTGCTT
rJMSF043C02+ GTAGTTTGATTAAGANCNGGAACTATTTTTTTTTTTTCTGATGGTGAATTATTTGTGCTT
rJMFF015P18+ GTAGTTTGATTAAGA-CTGGAACTATTTTTTTTTTTTCTGATGGTGAATTATTTGTGCTT
rJMFF049I19+ GTAGTTTGTTTAAGA-CTGGAACT-GTTTTTTTTTTTCTGATGGTGGTTTATTTGTGCTT
                      ____________________________________________________________
consensus GTAGTTTGATTAAGAACTGGAACTATTTTTTTTTTTTCTGATGGTGAATTATTTGTGCTT
 
. : . : . : . : . : . :
rJMSF023L02+ TGGTA
rJMSF037D15+ TGGT
rJMSF002O14+ TGG
rJMSF043F12+ TGGTA
rJMSF043C02+ TGGTA
rJMFF015P18+ TGGTACTGGTATTTTATTTGGGGAAAAAAA
rJMFF049I19+ TGGTACTGGTATTTTATTTGGGGAAAAAAAGTTAATTTTATCAGAGCCAGTTTATGCAAA
                      ____________________________________________________________
consensus TGGTACTGGTATTTTATTTGGGGAAAAAAAGTTAATTTTATCAGAGCCAGTTTATGCAAA