Contig 004154:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013K02Sequence590004154 (9)emb|CDY37804.1|2e-67BnaC04g00210D [Brassica napus]
JMFF018B24Sequence687004154 (9)emb|CDY37804.1|6e-66BnaC04g00210D [Brassica napus]
JMFF046H11Sequence569011834 (17)ref|XP_010518437.1|2e-45PREDICTED: probable glutamyl endopeptidase, chloroplastic isoform X1 [Camelina 183004154 (9)
JMFF049C20Sequence633011834 (17)ref|XP_006349188.1|1e-58PREDICTED: probable glutamyl endopeptidase, chloroplastic-like [Solanum tuberos569004154 (9)emb|CAG27629.1|7e-22unknown protein [Populus deltoides x Populus maximowiczii]
JMSF001I06Sequence296011834 (17)728004154 (9)emb|CDY37804.1|1e-78BnaC04g00210D [Brassica napus]
JMSF021E09Sequence671011834 (17)ref|XP_006349188.1|3e-62PREDICTED: probable glutamyl endopeptidase, chloroplastic-like [Solanum tuberos771004154 (9)emb|CBI36950.3|3e-98unnamed protein product [Vitis vinifera]
JMSF039F22Sequence652011834 (17)ref|XP_006349188.1|4e-61PREDICTED: probable glutamyl endopeptidase, chloroplastic-like [Solanum tuberos816004154 (9)emb|CBI36950.3|1e-110unnamed protein product [Vitis vinifera]
JMSF043A08Sequence649011834 (17)ref|XP_006349188.1|3e-60PREDICTED: probable glutamyl endopeptidase, chloroplastic-like [Solanum tuberos663004154 (9)emb|CDY37804.1|6e-75BnaC04g00210D [Brassica napus]
JMSF046A05Sequence572004154 (9)emb|CAG27629.1|7e-44unknown protein [Populus deltoides x Populus maximowiczii]

Alignment

This contig is upended


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rJMSF021E09+                                                            GCCGTGGAGT
rJMSF039F22+                    CTTGTTGCAAGTGCAGAGGCTGCATTAGGAGAAGTTATTCGCCGTGGAGT
                      ____________________________________________________________
consensus                       CTTGTTGCAAGTGCAGAGGCTGCATTAGGAGAAGTTATTCGCCGTGGAGT
 
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rJMSF021E09+          GGCTGACCCGAGCAAAANTTGCTGTTGGTGGTCATTCTTATGGAGCATTTATGACTGCAA
rJMSF039F22+          GGCTGACCCGAGCAAAA-TTGCTGTTGGTGGTCATTCTTATGGAGCATTTATGACTGCAA
                      ____________________________________________________________
consensus             GGCTGACCCGAGCAAAANTTGCTGTTGGTGGTCATTCTTATGGAGCATTTATGACTGCAA
 
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rJMSF021E09+          ATCTCCTCGCACACGCCCCGCATCTTTTCTCTTGTGGAATTGCACGTTCTGGGGCTTATA
rJMSF039F22+          ATCTCCTCGCACACGCCCCGCATCTTTTCTCTTGTGGAATTGCACGTTCTGGGGCTTATA
rJMSF043A08+                                                                  TATA
rJMSF001I06+                                             GGAATTGCACGTTCTGGGGCTTATA
                      ____________________________________________________________
consensus             ATCTCCTCGCACACGCCCCGCATCTTTTCTCTTGTGGAATTGCACGTTCTGGGGCTTATA
 
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rJMSF021E09+          ATAGAACACTAACGCCTTTTGGGTTTCAGAACGAGGACAGAACGCTGTGGGAGGCAACTA
rJMFF013K02+                           TTTGGGTTTCAGANCGAGGACAGAACGCTGTGGGAGGCAACTA
rJMSF039F22+          ATAGAACACTAACGCCTTTTGGGTTTCAGAACGAGGACAGAACGCTGTGGGAGGCAACTA
rJMSF043A08+          ATAGAACACTAACGCCTTTTGGGTTTCAGAACGAGGACAGAACGCTGTGGGAGGCAACTA
rJMSF001I06+          ATAGAACACTAACGCCTTTNGGGTTTCAGAACGAGGACAGAACGCTGTGGGAGGCAACTA
rJMFF018B24+                                    CAGAACGAGGACAGAACGCTGTGGGAGGCAACTA
                      ____________________________________________________________
consensus             ATAGAACACTAACGCCTTTTGGGTTTCAGAACGAGGACAGAACGCTGTGGGAGGCAACTA
 
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rJMSF021E09+          GTACTTATGTCGAGATGAGTCCGTTCATGTCAGCTAATAAAATTAAGAAGCCTATCCTGC
rJMFF013K02+          GTACTTATGTCGAGATGAGTCCGTTCATGTCAGCTAATAAAATTAAGAAGCCTATCCTGC
rJMSF039F22+          GTACTTATGTCGAGATGAGTCCGTTCATGTCAGCTAATAAAATTAAGAAGCCTATCCTGC
rJMSF043A08+          GTACTTATGTCGAGATGAGTCCGTTCATGTCAGCTAATAAAATTAAGAAGCCTATCCTGC
rJMSF001I06+          GTACTTATGTCGAGATGAGTCCGTTCATGTCAGCTAATAAAATTAAGAAGCCTATCCTGC
rJMFF018B24+          GTACTTATGTCGAGATGAGTCCGTTCATGTCAGCTAATAAAATTAAGAAGCCTATCCTGC
                      ____________________________________________________________
consensus             GTACTTATGTCGAGATGAGTCCGTTCATGTCAGCTAATAAAATTAAGAAGCCTATCCTGC
 
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rJMSF021E09+          TTATCCACGGAGAAGAGGACAACAATCCGGGAACCTTGACGATGCAGTCAGACCGTTTCT
rJMFF013K02+          TTATCCACGGAGAAGAGGACAACAATCCGGGAACCTNGACGATGCAGTCAGACCGTTTCT
rJMSF039F22+          TTATCCACGGAGAAGAGGACAACAATCCGGGAACCTTGACGATGCAGTCAGACCGTTTCT
rJMSF043A08+          TTATCCACGGAGAAGAGGACAACAATCCGGGAACCTTGACGATGCAGTCAGACCGTTTCT
rJMSF001I06+          TTATCCACGGAGAAGAGGACAACAATCCGGGAACCTTGACGATGCAGTCAGACCGTTTCT
rJMSF046A05+          TTATCCACGGAGAAGAGGACAACAATCCGGGAACCTTGACGATGCAGTCAGACCGTTTCT
rJMFF018B24+          TTATCCACGGAGAAGAGGACAACAATCCGGGAACCTTGACGATGCAGTCAGACCGTTTCT
                      ____________________________________________________________
consensus             TTATCCACGGAGAAGAGGACAACAATCCGGGAACCTTGACGATGCAGTCAGACCGTTTCT
 
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rJMSF021E09+          TCAATGCCCTAAAAGGTCACGGGGCACTTTGTCGCCTCGTAATTTTGCCATTCGAGAGTC
rJMFF013K02+          TCAATGCCCTAAAAGGTCACGGGGCACTTTGTCGCCTCGTAATTTTGCCATTCGAGAGTC
rJMSF039F22+          TCAATGCCCTAAAAGGTCACGGGGCACTTTGTCGCCTCGTAATTTTGCCATTCGAGAGTC
rJMSF043A08+          TCAATGCCCTAAAAGGTCACGGGGCACTTTGTCGCCTCGTAATTTTGCCATTCGAGAGTC
rJMSF001I06+          TCAATGCCCTAAAAGGTCACGGGGCACTTTGTCGCCTCGTAATTTTGCCATTCGAGAGTC
rJMSF046A05+          TCAATGCCNTAAAAGGTCACGGGGCACTTTGTCGCCTCGTAATTTTGCCATTCGAGAGTC
rJMFF018B24+          TCAATGCCCTAAAAGGTCACGGGGCACTTTGTCGCCTCGTAATTTTGCCATTCGAGAGTC
rJMFF049C20+                                        GTCGCCTCGTAATTTTGCCATTCGAGAGTC
                      ____________________________________________________________
consensus             TCAATGCCCTAAAAGGTCACGGGGCACTTTGTCGCCTCGTAATTTTGCCATTCGAGAGTC
 
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rJMSF021E09+          ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
rJMFF013K02+          ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
rJMSF039F22+          ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
rJMSF043A08+          ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
rJMSF001I06+          ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
rJMSF046A05+          ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
rJMFF018B24+          ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
rJMFF049C20+          ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
                      ____________________________________________________________
consensus             ATGGCTACACAGCACGGGAGAGCATAATGCATGTCCTGTGGGAGACGGACCGGTGGGTGC
 
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rJMSF021E09+          AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
rJMFF013K02+          AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
rJMSF039F22+          AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
rJMSF043A08+          AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
rJMSF001I06+          AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
rJMSF046A05+          AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
rJMFF018B24+          AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
rJMFF049C20+          AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
                      ____________________________________________________________
consensus             AAAAACATTGTGTGCCAAATACTTCAAAAGTTGATACCGATACCAAAGTAACGGAGGATC
 
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rJMSF021E09+          CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
rJMFF013K02+          CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
rJMSF039F22+          CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
rJMSF043A08+          CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
rJMSF001I06+          CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
rJMSF046A05+          CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
rJMFF018B24+          CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
rJMFF049C20+          CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
                      ____________________________________________________________
consensus             CAGAAAGCAAAGCGGTTAGTGCAAGTGGAGCGGGCGTCCCAGAACTGGCAAGTGACAGCA
 
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rJMSF021E09+          ACGATACATTCCCTTCGTTGAGGAGGTCATCGTTGCGATGAGGTCTGGAGTTGCGAGGAA
rJMFF013K02+          ACGATACATTCCCTTCGTTGAGGAGGTCATCGTTGTGATGAGGTCTGGAGTTGCGAGGAA
rJMSF039F22+          ACGATACATTCCCTTCGTTGAGGAGGTCATCGTTGTGATGAGGTCTGGAGTTGCGAGGAA
rJMSF043A08+          ACGATACATTCCCTTCGTTGAGGAGGTCATCGTTGTGATGAGGTCTGGAGTTGCGAGGAA
rJMSF001I06+          ACGATACATTCCCTTCGTTGAGGAGGTCATCGTTGTGATGAGGTCTGGAGTTGCGAGGAA
rJMSF046A05+          NCGATACATTCCCTTCGTTGAGGAGGTCATCGTTGTGATGAGGTCTGGAGTTGCGAGGAA
rJMFF018B24+          ACGATACATTCCCTTCGTTGAGGAGGTCATCGTTGTGATGAGGTCTGGAGTTGCGAGGAA
rJMFF049C20+          ACGATACATTCCCTTCGTTGAGGAGGTCATCGTTGTGATGAGGTCTGGAGTTGCGAGGAA
                      ____________________________________________________________
consensus             ACGATACATTCCCTTCGTTGAGGAGGTCATCGTTGTGATGAGGTCTGGAGTTGCGAGGAA
 
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rJMSF021E09+          GCATAGAAGTGGAAGAATTCGCTATCTGCAGCATACAATTCTTTAGCAACACTATTATCG
rJMFF013K02+          GCATAGAAGTGGAAGAATTCGCTATCTGCAGCATACAATTCTTTAGCAACACTATTATCG
rJMSF039F22+          GCATAGAAGTGGAAGAATTCGCTATCTGCAGCATACAATTCTTTAGCAACACTATTATCG
rJMSF043A08+          GCATAGAAGTGGAAGAATTCGCTATCTGCAGCATACAATTCTTTAGCAACACTATTATCG
rJMSF001I06+          GCATAGAAGTGGAAGAATTCGCTATCTGCAGCATACAATTCTTTAGCAACACTATTATCG
rJMSF046A05+          GCATAGAAGTGGAAGAATTCGCTATNTGCAGCATACAATTCTTTAGCAACACTATTATCG
rJMFF018B24+          GCATAGAAGTGGAAGAATTCGCTATCTGCAGCATACAATTCTTTAGCAACACTATTATCG
rJMFF049C20+          GCATAGAAGTGGAAGAATTCGCTATTTGCAGCATACAATTCTTTAGCAACACTATTATCG
                      ____________________________________________________________
consensus             GCATAGAAGTGGAAGAATTCGCTATCTGCAGCATACAATTCTTTAGCAACACTATTATCG
 
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rJMSF021E09+          CCTATAGATACAGAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
rJMFF013K02+          CCTATAGATACAGAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
rJMSF039F22+          CCTATAGATACAGAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
rJMSF043A08+          CCTATAGATACAGAGCTGCATAAACACTTTACAGCCCTGTATTGTTTACACTCAATATTA
rJMSF001I06+          CCTATAGATACAGAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
rJMSF046A05+          CCTATNGATACAGAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
rJMFF018B24+          CCTATAGATACAGAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
rJMFF046H11+                      GAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
rJMFF049C20+          CCTATAGATACAGAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
                      ____________________________________________________________
consensus             CCTATAGATACAGAGCTGCATAAACACTTTACA-CCCTGTATTGTTTACACTCAATATTA
 
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rJMSF021E09+          TTTGCAAATTCTTAGATACTATATCAACATTATACTTCTATA                  
rJMFF013K02+          TT                                                          
rJMSF039F22+          TTTGCAAATTCTTAGATACTATATCAACATTATACTTCTATAGTCTTT            
rJMSF043A08+          TTTGCAAATTCTTAGATACTATATCAACATTATACTTCTATAGTCTTTTGCCAAACATA 
rJMSF001I06+          TTTGCAAATTCTTAGATACTATATCAACATTATACTTCTATAGTCTTTTGCCAAACATAT
rJMSF046A05+          TTTGCAAATTCTTAGATA                                          
rJMFF018B24+          TTTGCAAATTCTTAGATACTATATCAACATTATACTTCTATAGTCTTTTGCCAAACATAT
rJMFF046H11+          TTTGCAAATTTTTAGATACTATATCAACATTATACTTCTATAGTCTTTTGCCAAACATAT
rJMFF049C20+          TTTGCAAATTTTTAGATACTATATCAACATTATACTTCTATAGTCTTTTGCCAAACATAT
                      ____________________________________________________________
consensus             TTTGCAAATTCTTAGATACTATATCAACATTATACTTCTATAGTCTTTTGCCAAACATAT
 
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rJMSF001I06+          GAACTTGAGCATGCAAAGTGAACATTCATAACATATTAAGGCCC                
rJMFF018B24+          GAACTTGAGCATGCAAAGTGAACATTCATAACATATTAAGGCCCTGTT            
rJMFF046H11+          GAACTTGAGCATGCAAAGTGAACATTCATAACATATTAAGGCCCTGTTTGGGAAATGGAT
rJMFF049C20+          GAACTTGAGCATGCAAAGTGAACATTCATAACATATTAAGGCCCTGTTTGGGAAATGGAT
                      ____________________________________________________________
consensus             GAACTTGAGCATGCAAAGTGAACATTCATAACATATTAAGGCCCTGTTTGGGAAATGGAT
 
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rJMFF046H11+          GTTAGTTGATTGGGTT                                            
rJMFF049C20+          GTTAGTTGATTGGGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
                      ____________________________________________________________
consensus             GTTAGTTGATTGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT