Contig 004146:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F19Sequence172003492 (5)727004146 (5)ref|XP_009602194.1|9e-83PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi
JMFF017P23Sequence172003492 (5)740004146 (5)ref|XP_009602194.1|3e-85PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi
JMFF032N08Sequence492011618 (8)dbj|BAO57286.1|6e-62V-type proton ATPase subunit [Ipomoea nil]672004146 (5)ref|XP_009602194.1|2e-70PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi
JMFF048I16Sequence344003492 (5)191004146 (5)
JMSF052P17Sequence694003492 (5)877004146 (5)ref|XP_009602194.1|1e-110PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi

Alignment

This contig is upended


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rJMSF052P17+             ACTGCCAGGGTATGAGTGATTTACTTTCTCCAATAATCAGTGTTATAACGGAGGACT
                      ____________________________________________________________
consensus                ACTGCCAGGGTATGAGTGATTTACTTTCTCCAATAATCAGTGTTATAACGGAGGACT
 
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rJMSF052P17+          TGAAGCTTTCTGGTGCTTTGTTGGTTTCATGAAGAAGGCTCGACACAACTTCAGGCTCGA
                      ____________________________________________________________
consensus             TGAAGCTTTCTGGTGCTTTGTTGGTTTCATGAAGAAGGCTCGACACAACTTCAGGCTCGA
 
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rJMSF052P17+          CGAGGTGGGAATCCGGAGGCAACTCAACATTGTTTCTAAAATCATTAAATCCAAGGATTC
rJMFF017P23+                                               AAAATCATTAAATCCAAGGATTC
rJMFF008F19+                                                             CAAGGATTC
                      ____________________________________________________________
consensus             CGAGGTGGGAATCCGGAGGCAACTCAACATTGTTTCTAAAATCATTAAATCCAAGGATTC
 
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rJMSF052P17+          ACATCTTTACAGACACTTGGAGAAGCTCCAGGCAGAGGACTGTTTTTTTGTGTATAGGAT
rJMFF017P23+          ACATCTTTACAGACACTTGGAGAAGCTCCAGGCAGAGGACTGTTTTTTTGTGTATAGGAT
rJMFF032N08+                                                 CTGTTTTTTTGTGTATAGGAT
rJMFF008F19+          ACATCTTTACAGACACTTGGAGAAGCTCCAGGCAGAGGACTGTTTTTTTGTGTATAGGAT
                      ____________________________________________________________
consensus             ACATCTTTACAGACACTTGGAGAAGCTCCAGGCAGAGGACTGTTTTTTTGTGTATAGGAT
 
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rJMSF052P17+          GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
rJMFF017P23+          GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
rJMFF032N08+          GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
rJMFF008F19+          GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
                      ____________________________________________________________
consensus             GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
 
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rJMSF052P17+          GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
rJMFF017P23+          GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
rJMFF032N08+          GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
rJMFF008F19+          GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
                      ____________________________________________________________
consensus             GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
 
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rJMSF052P17+          CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
rJMFF017P23+          CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
rJMFF032N08+          CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
rJMFF008F19+          CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
                      ____________________________________________________________
consensus             CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
 
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rJMSF052P17+          GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
rJMFF017P23+          GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
rJMFF032N08+          GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
rJMFF008F19+          GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
                      ____________________________________________________________
consensus             GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
 
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rJMSF052P17+          CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
rJMFF017P23+          CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
rJMFF032N08+          CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
rJMFF008F19+          CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
                      ____________________________________________________________
consensus             CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
 
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rJMSF052P17+          GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
rJMFF017P23+          GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
rJMFF032N08+          GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
rJMFF008F19+          GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
                      ____________________________________________________________
consensus             GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
 
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rJMSF052P17+          CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
rJMFF017P23+          CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
rJMFF032N08+          CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
rJMFF008F19+          CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
                      ____________________________________________________________
consensus             CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
 
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rJMSF052P17+          GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
rJMFF017P23+          GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
rJMFF032N08+          GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
rJMFF008F19+          GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
                      ____________________________________________________________
consensus             GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
 
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rJMSF052P17+          GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
rJMFF017P23+          GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
rJMFF032N08+          GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
rJMFF008F19+          GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
rJMFF048I16+                                                           GAGTCTGTTTA
                      ____________________________________________________________
consensus             GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
 
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rJMSF052P17+          TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
rJMFF017P23+          TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
rJMFF032N08+          TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
rJMFF008F19+          TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
rJMFF048I16+          TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
                      ____________________________________________________________
consensus             TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
 
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rJMSF052P17+          TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCAT                    
rJMFF017P23+          TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCATATTTTACC            
rJMFF032N08+          TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCATATTTTACC            
rJMFF008F19+          TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCATATTTTACC            
rJMFF048I16+          TTTTATTTTAGGGAATTACAAAAAGCGCATCCTACATCTTATTTTACCGGTGCAACCATA
                      ____________________________________________________________
consensus             TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCATATTTTACCGGTGCAACCATA
 
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rJMFF048I16+          AACAAATGGTTTTTAAATAAAAAAAAAAAGAAAAAAAAAAAAAANCTCTCCAGGTGGATG
                      ____________________________________________________________
consensus             AACAAATGGTTTTTAAATAAAAAAAAAAAGAAAAAAAAAAAAAANCTCTCCAGGTGGATG