Contig 004145:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF033E05-                                           GCCGCCTTTGCATCTCTTTGTAGATGAA
                      ____________________________________________________________
consensus                                             GCCGCCTTTGCATCTCTTTGTAGATGAA
 
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JMSF033E05-           ATGAAGGAGATGGATTGGTTCCAAATGGATTGTCCAAAAGCCGAAGTGCTAATCCTAAAC
                      ____________________________________________________________
consensus             ATGAAGGAGATGGATTGGTTCCAAATGGATTGTCCAAAAGCCGAAGTGCTAATCCTAAAC
 
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JMSF033E05-           TTTTCCTCGTCCGAATACTTCTTGCCTCCTTTTATTTGCAGCATGCCCAAGCTCAGGGCG
                      ____________________________________________________________
consensus             TTTTCCTCGTCCGAATACTTCTTGCCTCCTTTTATTTGCAGCATGCCCAAGCTCAGGGCG
 
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JMSF033E05-           CTGATATTAATAAACTATAGCACCTCCAATGCAGTCCTCCATAACCTCTCCGTTTTCAAT
                      ____________________________________________________________
consensus             CTGATATTAATAAACTATAGCACCTCCAATGCAGTCCTCCATAACCTCTCCGTTTTCAAT
 
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JMSF033E05-           GATTTGACATACTTGAGAAGCCTATGGTTTGAGAAAATCTCTGTCCCTCATTTGTCCAAT
rJMSF033E05+                                        GAGAAAATCTCTGTCCCTCATTTGTCCAAT
                      ____________________________________________________________
consensus             GATTTGACATACTTGAGAAGCCTATGGTTTGAGAAAATCTCTGTCCCTCATTTGTCCAAT
 
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JMSF033E05-           TCTACCAGGCCCCTCATATACCTGCGAAAGATTTCTTTAATCCTTTGCAGTATCAACAAC
JMFN035E16-                                  GCGAAAGATTTCTTTAATCCTTTGCAGTATCAACAAC
rJMSF033E05+          TCTACCAGGCCCCTCATATACCTGCGAAAGATTTCTTTAATCCTTTGCAGTATCAACAAC
                      ____________________________________________________________
consensus             TCTACCAGGCCCCTCATATACCTGCGAAAGATTTCTTTAATCCTTTGCAGTATCAACAAC
 
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JMSF033E05-           AGCCTCGATCAATCGGTTGTAGACCTCCCCCGCCTGTTCCCTCGTCTTTCAGAGCTCACA
JMFN035E16-           AGCCTCGATCAATCGGTTGTAGACCTCCCCCGCCTGTTCCCTCGTCTTTCAGAGCTCACA
rJMSF033E05+          AGCCTCGATCAATCGGTTGTAGACCTCCCCCGCCTGTTCCCTCGTCTTTCAGAGCTCACA
                      ____________________________________________________________
consensus             AGCCTCGATCAATCGGTTGTAGACCTCCCCCGCCTGTTCCCTCGTCTTTCAGAGCTCACA
 
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JMSF033E05-           ATGGATCACTGCATAAACTTCAATGACCTCCCGACAGGCATATGCAAGATGCGTTCGCTG
JMFN035E16-           ATGGATCACTGCATAAACTTCAATGACCTCCCGACAGGCATATGCAAGATGCGTTCGCTG
rJMSF033E05+          ATGGATCACTGCATAAACTTCAATGACCTCCCGACAGGCATATGCAAGATGCGTTCGCTG
                      ____________________________________________________________
consensus             ATGGATCACTGCATAAACTTCAATGACCTCCCGACAGGCATATGCAAGATGCGTTCGCTG
 
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JMSF033E05-           AAGACCTTTAGTGTCACTAACTGTGACAGTCTCCACGAACTGACACCCGAGCTAGGAGAA
JMFN035E16-           AAGACCTTTAGTGTCACTAACTGTGACAGTCTCCACGAACTGACACCCGAGCTAGGAGAA
rJMSF033E05+          AAGACCTTTAGTGTCACTAACTGTGACAGTCTCCACGAACTGACACCCGAGCTAGGAGAA
                      ____________________________________________________________
consensus             AAGACCTTTAGTGTCACTAACTGTGACAGTCTCCACGAACTGACACCCGAGCTAGGAGAA
 
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JMSF033E05-           CTGAGTTTTCTGCAAATTCTAAGGATATACGCCTGCCCAAATGTTAAAAGCCTTCCTCCT
JMFN035E16-           CTGAGTTTTCTGCAAATTCTAAGGATATACGCCTGCCCAAATGTTAAAAGCCTTCCTCCT
rJMSF033E05+          CTGAGTTTTCTGCAAATTCTAAGGATATACGCCTGCCCAAATGTTAAAAGCCTTCCTCCT
                      ____________________________________________________________
consensus             CTGAGTTTTCTGCAAATTCTAAGGATATACGCCTGCCCAAATGTTAAAAGCCTTCCTCCT
 
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JMSF033E05-           AGCATTGGCAACTTGGTATCCCTGAAATACCTCGATATCTCTCAATGTGTTAGCTTGAAA
JMFN035E16-           AGCATTGGCAACTTGGTATCCCTGAAATACCTCGATATCTCTCAATGTGTTAGCTTGAAA
rJMSF033E05+          AGCATTGGCAACTTGGTATCCCTGAAATACCTCGATATCTCTCAATGTGTTAGCTTGAAA
                      ____________________________________________________________
consensus             AGCATTGGCAACTTGGTATCCCTGAAATACCTCGATATCTCTCAATGTGTTAGCTTGAAA
 
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JMSF033E05-           ACACTCCCTGCGACGATCGATGGGTGTAGAAG                            
JMFN035E16-           ACACTCCCTGCGACGATCGATGGGTGTAGAAGACTGGAGAAGATTGACATGAGGGAATGC
rJMSF033E05+          ACACTCCCTGCGACGATCGATGGGTGTAGAAGACTGGAGAAGATTGACATGAGGGAATGC
                      ____________________________________________________________
consensus             ACACTCCCTGCGACGATCGATGGGTGTAGAAGACTGGAGAAGATTGACATGAGGGAATGC
 
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JMFN035E16-           CCGGTGATTAAGAGCTTGCCCGGGTCTGTGAAGTACTTGGAATCTCTACGCAGGGTAATT
rJMSF033E05+          CCGGTGATTAAGAGCTTGCCCGGGTCTGTGAAGTACTTGGAATCTCTACGCAGGGTAATT
                      ____________________________________________________________
consensus             CCGGTGATTAAGAGCTTGCCCGGGTCTGTGAAGTACTTGGAATCTCTACGCAGGGTAATT
 
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JMFN035E16-           TGTGACGAAGAGGTCTCTTTCCATTGGAAGGACGTTGAGGAGGCTGTACTAGGTTTATGT
rJMSF033E05+          TGTGACGAAGAGGTCTCTTTCCATTGGAAGGACGTTGAGGAGGCTGTACTAGGTTTATGT
rJMFF048E02+                                 TTGGAAGGCCGTTGAGGAGGCTGTACTAGGTTTATGT
                      ____________________________________________________________
consensus             TGTGACGAAGAGGTCTCTTTCCATTGGAAGGACGTTGAGGAGGCTGTACTAGGTTTATGT
 
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JMFN035E16-           GTTCAGGTTGCCGAGGAATGCTTCACTCTTGACTGGCTATCTGAGTAAATACATTCTGAG
rJMSF033E05+          GTTCAGGTTGCCGAGGAATGCTTCACTCTTGACTGGCTATCTGAGTAAATACATTCTGAG
rJMFF048E02+          GTTCAGGTTGCCGAGGAATGCTTCACTCTTGACTGGCTATCGGAGTAAATCCATTCTGAG
                      ____________________________________________________________
consensus             GTTCAGGTTGCCGAGGAATGCTTCACTCTTGACTGGCTATCTGAGTAAATACATTCTGAG
 
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JMFN035E16-           GTTTATATTCTGAAATGTTAGCCGAGAGTGNCATGCAGGTTAAGGATGTATAGTAGATGG
rJMSF033E05+          GTTTATATTCTGAAATGTTAGCCGAGAGTGCAGTGCAGGTTAAGGATGTATAGTAGATGG
rJMFF048E02+          GTTTATATTCTGAAATGTTAGCCGAGAGTCCAATGCAGGTTAAGGATGTATAGTAGATGG
                      ____________________________________________________________
consensus             GTTTATATTCTGAAATGTTAGCCGAGAGTGCAATGCAGGTTAAGGATGTATAGTAGATGG
 
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JMFN035E16-           AGTTTGGCTA                                                  
rJMSF033E05+          AGTTTGGCTATAATCTTGGTAT                                      
rJMFF048E02+          AGTTTGGCTATAATCTTGGTATGTATAAGCTAGCTAAGGATGTATAGTAGAAAGCTTTAA
                      ____________________________________________________________
consensus             AGTTTGGCTATAATCTTGGTATGTATAAGCTAGCTAAGGATGTATAGTAGAAAGCTTTAA
 
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rJMFF048E02+          TTTAACATCTTATGGAGTTTGGCTATAATCTTGGTCGGTATAAGCTAGCTAAGGATGTAA
                      ____________________________________________________________
consensus             TTTAACATCTTATGGAGTTTGGCTATAATCTTGGTCGGTATAAGCTAGCTAAGGATGTAA
 
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rJMFF048E02+          TCTTGGTTTGAATCGTCCCTTGTGGAAATTCAATTCGGGTTATCCCAGAATTCTCCTCCT
                      ____________________________________________________________
consensus             TCTTGGTTTGAATCGTCCCTTGTGGAAATTCAATTCGGGTTATCCCAGAATTCTCCTCCT