| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF043A22 | Sequence | 423 | 004144 (3) | ref|XP_004136933.1| | 8e-59 | PREDICTED: magnesium transporter MRS2-3-like [Cucumis sativus] ref|XP_004159919. | |||||
| JMFF047P15 | Sequence | 631 | 000740 (3) | ref|XP_004230684.1| | 5e-80 | PREDICTED: magnesium transporter MRS2-3 [Solanum lycopersicum] | 580 | 004144 (3) | ref|XP_004136933.1| | 2e-76 | PREDICTED: magnesium transporter MRS2-3-like [Cucumis sativus] ref|XP_004159919. |
| JMSF022L24 | Sequence | 643 | 000740 (3) | ref|XP_004230684.1| | 2e-79 | PREDICTED: magnesium transporter MRS2-3 [Solanum lycopersicum] | 808 | 004144 (3) | ref|XP_009603566.1| | 3e-112 | PREDICTED: magnesium transporter MRS2-3 isoform X1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF022L24+ AATTAAAAGCCGCTTGGTTGC
____________________________________________________________
consensus AATTAAAAGCCGCTTGGTTGC
. : . : . : . : . : . :
rJMSF022L24+ CATAACTGGGGCGTGTTCAGAAGGTAAGAGATGAACTGGAGCATCTACTAGATGATGATG
____________________________________________________________
consensus CATAACTGGGGCGTGTTCAGAAGGTAAGAGATGAACTGGAGCATCTACTAGATGATGATG
. : . : . : . : . : . :
rJMSF022L24+ AAGATATGGCTGAGATGTATTTGACTGAAAAACTTATGCAACAACTTGAGGGTTCTTCTG
____________________________________________________________
consensus AAGATATGGCTGAGATGTATTTGACTGAAAAACTTATGCAACAACTTGAGGGTTCTTCTG
. : . : . : . : . : . :
rJMSF022L24+ TTTCATCCATAAATGAGCAAGATGGCTTGGATGAAGGAGTTATTCAGGAAGATTTGATTG
____________________________________________________________
consensus TTTCATCCATAAATGAGCAAGATGGCTTGGATGAAGGAGTTATTCAGGAAGATTTGATTG
. : . : . : . : . : . :
rJMSF022L24+ ATAGGATTCCTGCTGAGGTCTCAATGGGAGCAAATACTGGTTCCACCAGCTATGATGCTG
____________________________________________________________
consensus ATAGGATTCCTGCTGAGGTCTCAATGGGAGCAAATACTGGTTCCACCAGCTATGATGCTG
. : . : . : . : . : . :
rJMSF022L24+ ATCTTCCTCATATTGATCACCAGCCTGAAAGATTAAATACACTTGGCCGAGGTAGTCAAG
____________________________________________________________
consensus ATCTTCCTCATATTGATCACCAGCCTGAAAGATTAAATACACTTGGCCGAGGTAGTCAAG
. : . : . : . : . : . :
rJMSF022L24+ GAACACGGACAAGTACAACACATAGTGCTATTAGCAAGCATCTTGATGTGGAGGAGCTTG
____________________________________________________________
consensus GAACACGGACAAGTACAACACATAGTGCTATTAGCAAGCATCTTGATGTGGAGGAGCTTG
. : . : . : . : . : . :
rJMSF022L24+ AAATGCTCTTAGAAGCATACTTTGTTCAGATCGATGGCACATTGAATAAACTCTCCACTC
rJMFF043A22+ C
rJMFF047P15+ C
____________________________________________________________
consensus AAATGCTCTTAGAAGCATACTTTGTTCAGATCGATGGCACATTGAATAAACTCTCCACTC
. : . : . : . : . : . :
rJMSF022L24+ TCCGGGAGTATGTGGATGACACAGAAGATTACATCAACATTATGCTTGACGATAAACAGA
rJMFF043A22+ TCCGGGAGTATGTGGATGACACAGAAGATTACATCAACATTATGCTTGACGATAAACAGA
rJMFF047P15+ TCCGGGAGTATGTGGATGACACAGAAGATTACATCAACATTATGCTTGACGATAAACAGA
____________________________________________________________
consensus TCCGGGAGTATGTGGATGACACAGAAGATTACATCAACATTATGCTTGACGATAAACAGA
. : . : . : . : . : . :
rJMSF022L24+ ACCATCTTCTGCAAATGGGAGTCATGTTGACAGCAGCAACTCTAGTCATAAGTGCATTTG
rJMFF043A22+ ACCATTTTCTGCAAATGGGAGTCATGTTGACAGCAGCAACTTTAGTCATAAGTGCATTTG
rJMFF047P15+ ACCATCTTCTGCAAATGGGAGTCATGTTGACAGCAGCAACTCTAGTCATAAGTGCATTTG
____________________________________________________________
consensus ACCATCTTCTGCAAATGGGAGTCATGTTGACAGCAGCAACTCTAGTCATAAGTGCATTTG
. : . : . : . : . : . :
rJMSF022L24+ TGGTTGTGGCAGGAGTTTTTGGCATGAATATTGAAATTGAGCTGTTTAATGCTGAAAAAG
rJMFF043A22+ TGGTTGTGGCAGGAGTTTTTGGCATGAATATTGAAATTGAGCTGTTTAATGCTGAAAAAG
rJMFF047P15+ TGGTTGTGGCAGGAGTTTTTGGCATGAATATTGAAATTGAGCTGTTTAATGCTGAAAAAG
____________________________________________________________
consensus TGGTTGTGGCAGGAGTTTTTGGCATGAATATTGAAATTGAGCTGTTTAATGCTGAAAAAG
. : . : . : . : . : . :
rJMSF022L24+ CTGGGATGCCAGAGTTCTTGTGGACCATTGGTGGTGGTTGCACTGGTAGTATTTTCCTGT
rJMFF043A22+ CTGGGATGCCAGAGTTCTTGTGGACCATTGGTGGTGGTTGCACTGGTAGTATTTTCCTGT
rJMFF047P15+ CTGGGATGCCAGAGTTCTTGTGGACCATTGGTGGTGGTTGCACTGGTAGTATTTTCCTGT
____________________________________________________________
consensus CTGGGATGCCAGAGTTCTTGTGGACCATTGGTGGTGGTTGCACTGGTAGTATTTTCCTGT
. : . : . : . : . : . :
rJMSF022L24+ ATGTGATTGCAATTGCCTGGTGTAAGCACAAACGTTTACTTGAGTAAAAGGAGAGATCAA
rJMFF043A22+ ATGTGATTGCAATTGCCTGGTGTAAGCACAAACGTTTACTTGAGTAAAAGGAGAGATCAA
rJMFF047P15+ ATGTGATTGCAATTGCCTGGTGTAAGCACAAACGTTTACTTGAGTAAAAGGAGAGATCAA
____________________________________________________________
consensus ATGTGATTGCAATTGCCTGGTGTAAGCACAAACGTTTACTTGAGTAAAAGGAGAGATCAA
. : . : . : . : . : . :
rJMSF022L24+ TCCTCAATATGGCGACAACATGTATGTATATGGATCCTAAACTGAAGGATCCCAAGTTGA
rJMFF043A22+ TCCTCAATATGGCGACAACATGTATGTATATGGATCCTAAACTGAAGGATCCCAAGTTGA
rJMFF047P15+ TCCTCAATATGGCGACAACATGTATGTATATGGATCCTAAACTGAAGGATCCCAAGTTGA
____________________________________________________________
consensus TCCTCAATATGGCGACAACATGTATGTATATGGATCCTAAACTGAAGGATCCCAAGTTGA
. : . : . : . : . : . :
rJMSF022L24+ ACTT
rJMFF043A22+ ACTTTGTATTGATGCTTGAAATATATGATTGTGGTATGAAACT
rJMFF047P15+ ACTTTGTATTGATGCTTGAAATATATGATTGTGGTATGAAACTATGAACAGCCTTTTGCC
____________________________________________________________
consensus ACTTTGTATTGATGCTTGAAATATATGATTGTGGTATGAAACTATGAACAGCCTTTTGCC