Contig 004142:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033P13Sequence585006019 (3)ref|XP_011072869.1|4e-18PREDICTED: uncharacterized protein LOC105157988 isoform X1 [Sesamum indicum]768004142 (3)ref|XP_006345129.1|52.4PREDICTED: uncharacterized protein LOC102592426 [Solanum tuberosum]
JMFF047N19Sequence637006019 (3)ref|XP_011072870.1|5e-19PREDICTED: uncharacterized protein LOC105157988 isoform X2 [Sesamum indicum]375004142 (3)
JMSF045M20Sequence765006019 (3)ref|XP_011072870.1|7e-19PREDICTED: uncharacterized protein LOC105157988 isoform X2 [Sesamum indicum]747004142 (3)ref|XP_006345129.1|49.3PREDICTED: uncharacterized protein LOC102592426 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF045M20+                                                       TTGACATGACAGGTG
rJMFF033P13+                                               CATGGAAATTGACATGACAGGTG
                      ____________________________________________________________
consensus                                                  CATGGAAATTGACATGACAGGTG
 
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rJMSF045M20+          GGGGNCCGAGCGTGGGTAAAGCCGACTCTATTAACAGTGGAGACGATGATAAAGAGGTCG
rJMFF033P13+          GGGGGCCGAGCGTGGGTAAAGCCGACTCTATTANCAGTGGAGACGATGATAAAGAGGTCG
                      ____________________________________________________________
consensus             GGGGGCCGAGCGTGGGTAAAGCCGACTCTATTAACAGTGGAGACGATGATAAAGAGGTCG
 
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rJMSF045M20+          ACATGGAGATTGACATGATAGGCGGGCGAAATGTGGGTAAACAAGATGTAGTAATTCGAC
rJMFF033P13+          ACATGGAGATTGACATGATAGGCGGGCGAAATGTGGGTAAACAAGATGTAGTAATTCGAC
                      ____________________________________________________________
consensus             ACATGGAGATTGACATGATAGGCGGGCGAAATGTGGGTAAACAAGATGTAGTAATTCGAC
 
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rJMSF045M20+          GTGACAGTTCTGGGAACAGATACGAAAGCTCGACACCAACAACACCTGTTACTGCCAGCG
rJMFF033P13+          GTGACAGTTCTGGGAACAGATACGAAAGCTCGACACCAACAACACCTGTTACTGCCAGCG
                      ____________________________________________________________
consensus             GTGACAGTTCTGGGAACAGATACGAAAGCTCGACACCAACAACACCTGTTACTGCCAGCG
 
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rJMSF045M20+          GTGTGATGCAATGTGGTCTCTCAAAAGTTAAAAGAGAAGAACCATTTCAAGATTGGCCTC
rJMFF033P13+          GTGTGATGCAATGTGGTCTCTCAAAAGTTAAAAGAGAAGAACCATTTCAAGATTGGCCTC
                      ____________________________________________________________
consensus             GTGTGATGCAATGTGGTCTCTCAAAAGTTAAAAGAGAAGAACCATTTCAAGATTGGCCTC
 
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rJMSF045M20+          CGGGTTTTAAACCTAGGAACAAATCTGAATGCTCAACACCGACTGCTGGTGGAGATGTTA
rJMFF033P13+          CGGGTTTTAAACCTAGGAACAAATCTGAATGCTCAACACCGACTGCTGGTGGAGATGTTA
                      ____________________________________________________________
consensus             CGGGTTTTAAACCTAGGAACAAATCTGAATGCTCAACACCGACTGCTGGTGGAGATGTTA
 
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rJMSF045M20+          GTGTTCCTCCGGGTTTTAAACCGTTACTGCCTAGGAGCAAATTTGAATGCTCAACACCGA
rJMFF033P13+          GTGTTCCTCCGGGTTTTAAACCGTTACTGCCTAGGAGCAAATTTGAATGCTCAACACCGA
                      ____________________________________________________________
consensus             GTGTTCCTCCGGGTTTTAAACCGTTACTGCCTAGGAGCAAATTTGAATGCTCAACACCGA
 
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rJMSF045M20+          CTGCTAGTGGAGATGTTAGTGTTCCTCCGGGTTTTAAACCGTTACTGCCTAGGAACAGAT
rJMFF033P13+          CTGCTAGTGGAGATGTTAGTGTTCCTCCGGGTTTTAAACCGTTACTGCCTAGGAACAGAT
rJMFF047N19+                                                       TGCCTAGGAACAGAT
                      ____________________________________________________________
consensus             CTGCTAGTGGAGATGTTAGTGTTCCTCCGGGTTTTAAACCGTTACTGCCTAGGAACAGAT
 
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rJMSF045M20+          CTGAATGCTCAACACCGACTTCTGTTGGAGATGTTCGTGTTCCACCGGGTTTTAAACCAT
rJMFF033P13+          CTGAATGCTCAACACCGACTTCTGTTGGAGATGTTCGTGTTCCACCGGGTTTTAAACCAT
rJMFF047N19+          CTGAATGCTCAACCCCGACTTCTGTTGGAGATGTTCGTGTTCCACCGGGTTTTAAACCAT
                      ____________________________________________________________
consensus             CTGAATGCTCAACACCGACTTCTGTTGGAGATGTTCGTGTTCCACCGGGTTTTAAACCAT
 
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rJMSF045M20+          TACTGCCTCCCTGAAAACCATGAATAATGGCATATAATGGGTGGTGGTAATGTACAGCTT
rJMFF033P13+          TACTGCCTCCCTGAAAACCATGAATAATGGCATATAATGGGTGGTGGTAATGTACAGCTT
rJMFF047N19+          TACTGCCTCCCTGAAAACCATGAATAATGGCATATAATGGGTGGTGGTAATGTACAGCTT
                      ____________________________________________________________
consensus             TACTGCCTCCCTGAAAACCATGAATAATGGCATATAATGGGTGGTGGTAATGTACAGCTT
 
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rJMSF045M20+          GCTTTTGGCTTGTGACTCAAACTCCTTTCCCCTAGAGGCTAGATCAAGCTTACTGGGGGT
rJMFF033P13+          GCTTTTGGCTTGTGACTCAAACTCCTTTCCCCTAGAGGCTAGATCAAGCTTACTGGGGGT
rJMFF047N19+          GCTTTTGGCTTGTGACTCAAACTCCTTTCCCCTAGAGGCTAGATCAAGCTTACTGGGGGT
                      ____________________________________________________________
consensus             GCTTTTGGCTTGTGACTCAAACTCCTTTCCCCTAGAGGCTAGATCAAGCTTACTGGGGGT
 
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rJMSF045M20+          GAATATAGAGTAACTTTGTTATACAAGTGCTGTAAATTTGAGAGATTGATTGCCTGTGGA
rJMFF033P13+          GAATATAGAGTAACTTTGTTATACAAGTGCTGTAAATTTGAGAGATTGATTGCCTGTGGA
rJMFF047N19+          GAATATAGAGTAACTTTGTTATACAAGTGCTGTAAATTTGAGAGATTGATTGCCTGTGGA
                      ____________________________________________________________
consensus             GAATATAGAGTAACTTTGTTATACAAGTGCTGTAAATTTGAGAGATTGATTGCCTGTGGA
 
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rJMSF045M20+          TCACTGATAAAGTAATCTTTTGTTATGGTTGAGCGTAATTCAGATTATCCGAACTAATAC
rJMFF033P13+          TCACTGATAAAGTAATCTTTTGTTATGGTTGAGCGTAATTCAGATTATCCGAACTAATAC
rJMFF047N19+          TCCCTGATAAAGTAATCTTTTGTTATGGTTGAGCGTAATTCAGATTATCCGAACTAATCC
                      ____________________________________________________________
consensus             TCACTGATAAAGTAATCTTTTGTTATGGTTGAGCGTAATTCAGATTATCCGAACTAATAC
 
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rJMSF045M20+          TGAAATTCGAAC                                                
rJMFF033P13+          TGAAATTCGAACTGAATTTTAAATT                                   
rJMFF047N19+          TGAAATTCGAACTGAATTTTAAATTTCAGGTGAACCTGAATAGTTATCGGTTCAAATATT
                      ____________________________________________________________
consensus             TGAAATTCGAACTGAATTTTAAATTTCAGGTGAACCTGAATAGTTATCGGTTCAAATATT