Contig 004140:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047I04Sequence442000601 (6)ref|XP_009761880.1|210PREDICTED: uncharacterized protein LOC104213993 [Nicotiana sylvestris]425004140 (3)ref|XP_009615808.1|59.7PREDICTED: uncharacterized protein LOC104108475 [Nicotiana tomentosiformis] ref|
JMFS007G11Sequence604004140 (3)emb|CBI27581.3|5e-45unnamed protein product [Vitis vinifera]
JMSF014E14Sequence537000601 (6)ref|XP_009761880.1|136PREDICTED: uncharacterized protein LOC104213993 [Nicotiana sylvestris]772004140 (3)ref|XP_009761880.1|205PREDICTED: uncharacterized protein LOC104213993 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF014E14+            GAGAATGATAGTANCGATANTCCTCCGGATGGCAAGCAACAAGAGCCTTCCAAGCCAT
                      ____________________________________________________________
consensus               GAGAATGATAGTANCGATANTCCTCCGGATGGCAAGCAACAAGAGCCTTCCAAGCCAT
 
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JMFS007G11-                                                              TGGCTGATC
rJMSF014E14+          TCAGACTCCTGAATGAATTAAGCGATCTGATGATGCTTCCGTNTGACATGGTGGCTGATC
                      ____________________________________________________________
consensus             TCAGACTCCTGAATGAATTAAGCGATCTGATGATGCTTCCGTNTGACATGGTGGCTGATC
 
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JMFS007G11-           CACAAACAAGAAAAGAAGTTTGTGCAACGTTCTCTCCGACACTGATCAAGATGATTCTTA
rJMSF014E14+          CACAAACAAGAAAAGAAGTTTGTGCAACGTTCTCTCCGACACTGATCAAGATGATTCTTA
                      ____________________________________________________________
consensus             CACAAACAAGAAAAGAAGTTTGTGCAACGTTCTCTCCGACACTGATCAAGATGATTCTTA
 
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JMFS007G11-           GCGGTTTTGTTCCCGATGAATTCTACCAAAAGCGAGTTCCCCAAGAAGTTTTCGATGCCC
rJMSF014E14+          GCGGTTTTGTTCCCGATGAATTCTACCAAAAGCGAGTTCCCCAAGAAGTTTTCGATGCCC
                      ____________________________________________________________
consensus             GCGGTTTTGTTCCCGATGAATTCTACCAAAAGCGAGTTCCCCAAGAAGTTTTCGATGCCC
 
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JMFS007G11-           TTGATGCCGAGGATGATGTAGATACAAACGGAGAGCGTGTGACTAGCTTTCCTTGTAGCG
rJMSF014E14+          TTGATGCCGAGGATGATGTAGATACAAACGGAGAGCGTGTGACTAGCTTTCCTTGTAGCG
                      ____________________________________________________________
consensus             TTGATGCCGAGGATGATGTAGATACAAACGGAGAGCGTGTGACTAGCTTTCCTTGTAGCG
 
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JMFS007G11-           CTACTCCCATAGTCTATTCACCGCCTTCTGCAGCCTCAGTCACCAGGTCCATCGGAGAAG
rJMSF014E14+          CTACTCCCATAGTCTATTCACCGCCTTCTGCAGCCTCAGTCACCAGGTCCATCGGAGAAG
                      ____________________________________________________________
consensus             CTACTCCCATAGTCTATTCACCGCCTTCTGCAGCCTCAGTCACCAGGTCCATCGGAGAAG
 
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JMFS007G11-           TTGGATCCCAATCTTTATCCCGCAATGGATCATCAGTTCTGAAAAAATCCTACACTAGTG
rJMSF014E14+          TTGGATCCCAATCTTTATCCCGCAATGGATCATCAGTTCTGAAAAAATCCTACACTAGTG
rJMFF047I04+                                                                 TAGTG
                      ____________________________________________________________
consensus             TTGGATCCCAATCTTTATCCCGCAATGGATCATCAGTTCTGAAAAAATCCTACACTAGTG
 
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JMFS007G11-           ATGATGAGCTGGATGAGCTCGACTCGCCCTTGACTTCCATTACAGCTGATAGATCTCGGG
rJMSF014E14+          ATGATGAGCTGGATGAGCTCGACTCGCCCTTGACTTCCATTACAGCTGATAGATCTCGGG
rJMFF047I04+          ATGATGAGCTGGATGAGCTCGACTCGCCCTTGACTTCCATTACAGCTGATAGATCTCGGG
                      ____________________________________________________________
consensus             ATGATGAGCTGGATGAGCTCGACTCGCCCTTGACTTCCATTACAGCTGATAGATCTCGGG
 
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JMFS007G11-           GATCTTCTTCGGTGAAGATAAACTGGAGCCCCAAAGGCGGCAAGGGCTGCCGGAATATTG
rJMSF014E14+          GATCTTCTTCGGTGAAGATAAACTGGAGCCCCAAAGGCGGCAAGGGCTGCCGGAATATTG
rJMFF047I04+          GATCTTCTTCGGTGAAGATAAACTGGAGCCCCAAAGGCGGCAAGGGCTGCCGGAATATTG
                      ____________________________________________________________
consensus             GATCTTCTTCGGTGAAGATAAACTGGAGCCCCAAAGGCGGCAAGGGCTGCCGGAATATTG
 
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JMFS007G11-           TCAGGTATCAGCTACTCCGAGAAGTATGGAGAGACGACGAACAATGAGATGGTGAACATA
rJMSF014E14+          TCAGGTATCAGCTACTCCGAGAAGTATGGAGAGACGACGAACAATGAGATGGTGAACATA
rJMFF047I04+          TCAGGTATCAGCTACTCCGAGAAGTATGGAGAGACGACGAACAATGAGATGGTGAACATA
                      ____________________________________________________________
consensus             TCAGGTATCAGCTACTCCGAGAAGTATGGAGAGACGACGAACAATGAGATGGTGAACATA
 
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JMFS007G11-           TAACATATGCAATATATGTATGAGTTATTCCTTCTAATTACACTTTTAAGAAGTTTTTGA
rJMSF014E14+          TAACATATGCAATATATGTATGAGTTATTCCTTCTAATTACACTTTTAAGAAGTTTTTGA
rJMFF047I04+          TAACATATGCAATATATGTATGAGTTATTCCTTCTAATTACACTTTTAAGAAGTTTTTGA
                      ____________________________________________________________
consensus             TAACATATGCAATATATGTATGAGTTATTCCTTCTAATTACACTTTTAAGAAGTTTTTGA
 
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JMFS007G11-           GCAGGAGATTATTGTGATTACGGAGTATTATTTTTCGTGTGAAGTCGGGTAAATA     
rJMSF014E14+          GCAGGAGATTATTGTGATTACGGAGTATTATTTTTCGTGTGAAGTCGGGTAAATAGAATG
rJMFF047I04+          GCAGGAGATTATTGTGATTACGGAGTATTATTTTTCGTGTGAAGTCGGGTAAATAGAATG
                      ____________________________________________________________
consensus             GCAGGAGATTATTGTGATTACGGAGTATTATTTTTCGTGTGAAGTCGGGTAAATAGAATG
 
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rJMSF014E14+          TAGATGGCGCAATCTATATAAGAAGATGAATCTTTATATTTTGTGTAATGAATT      
rJMFF047I04+          TAGATGGCGCAATCTATATAAGAAGATGAATCTTTATATTTTGTGTAATGAATTACCACG
                      ____________________________________________________________
consensus             TAGATGGCGCAATCTATATAAGAAGATGAATCTTTATATTTTGTGTAATGAATTACCACG
 
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rJMFF047I04+          TTGGTGGATATATGAAATCAGATTTGTTGAATCTAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             TTGGTGGATATATGAAATCAGATTTGTTGAATCTAAAAAAAAAAAAAAACTCTCCAGGGT