Contig 004139:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009A05Sequence584006088 (16)gb|KDP32393.1|2e-50hypothetical protein JCGZ_13318 [Jatropha curcas]720004139 (15)ref|XP_006356754.1|4e-62PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMFF017G14Sequence391006088 (16)ref|XP_009778211.1|1e-47PREDICTED: protein NRT1/ PTR FAMILY 6.2-like [Nicotiana sylvestris]693004139 (15)ref|XP_006347704.1|7e-54PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMFF030D12Sequence587006088 (16)gb|KDP32393.1|1e-70hypothetical protein JCGZ_13318 [Jatropha curcas]650004139 (15)ref|XP_006356754.1|3e-53PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMFF031F06Sequence608006088 (16)gb|KDP32393.1|4e-65hypothetical protein JCGZ_13318 [Jatropha curcas]716004139 (15)ref|XP_006356754.1|4e-62PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMFF044N08Sequence634006088 (16)gb|KDP32393.1|1e-71hypothetical protein JCGZ_13318 [Jatropha curcas]573004139 (15)ref|XP_006356754.1|1e-31PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMFF047H23Sequence620006088 (16)gb|KDP32393.1|2e-67hypothetical protein JCGZ_13318 [Jatropha curcas]277004139 (15)
JMFN035K24Sequence623004139 (15)ref|XP_009608738.1|1e-57PREDICTED: protein NRT1/ PTR FAMILY 6.2-like isoform X2 [Nicotiana tomentosifor
JMSF013D23Sequence228006088 (16)ref|XP_002281975.1|4e-14PREDICTED: protein NRT1/ PTR FAMILY 6.2-like isoform X1 [Vitis vinifera]733004139 (15)ref|XP_006356754.1|4e-73PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMSF019C16Sequence457006088 (16)ref|XP_008784904.1|4e-61PREDICTED: protein NRT1/ PTR FAMILY 6.2-like [Phoenix dactylifera]747004139 (15)ref|XP_006356754.1|2e-77PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMSF021P22Sequence647006088 (16)gb|KDP32393.1|2e-74hypothetical protein JCGZ_13318 [Jatropha curcas]774004139 (15)ref|XP_006356754.1|4e-82PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMSF043O23Sequence743006088 (16)gb|KDP32393.1|2e-88hypothetical protein JCGZ_13318 [Jatropha curcas]753004139 (15)ref|XP_009608738.1|6e-57PREDICTED: protein NRT1/ PTR FAMILY 6.2-like isoform X2 [Nicotiana tomentosifor
JMSF045M07Sequence743006088 (16)gb|KDP32393.1|6e-87hypothetical protein JCGZ_13318 [Jatropha curcas]746004139 (15)ref|XP_006356754.1|4e-73PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMSF046M07Sequence540004139 (15)ref|XP_006356754.1|4e-45PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMSF051B09Sequence651006088 (16)gb|KDP32393.1|3e-76hypothetical protein JCGZ_13318 [Jatropha curcas]787004139 (15)ref|XP_006356754.1|9e-76PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]
JMSF051I09Sequence670006088 (16)gb|KDP32393.1|3e-77hypothetical protein JCGZ_13318 [Jatropha curcas]787004139 (15)ref|XP_006356754.1|1e-70PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF021P22+ TCGTAGCTGCCATTCTCATCACCTTGGCTCTNTACGATCGCATCGT
rJMSF019C16+ TACGATCGCATCGT
rJMSF045M07+ TCGT
rJMSF051B09+ TACGATCGCATCGT
rJMSF013D23+ CGT
rJMSF051I09+ TACGATCGCATCGT
                      ____________________________________________________________
consensus TCGTAGCTGCCATTCTCATCACCTTGGCTCTNTACGATCGCATCGT
 
. : . : . : . : . : . :
rJMSF021P22+ CATGCCCCNTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF019C16+ CATGCCCCTTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF043O23+ GGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF045M07+ CATGCCCCTTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF051B09+ CATGCCCCNTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMFF009A05+ ACCAACTTGCAAAGAATTGC
rJMFF031F06+ ACCAACTTGCAAAGAATTGC
rJMSF013D23+ CATGCCCCTTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF051I09+ CATGCCCCTTGGAAGAAATGGAAAGGAACCCCCAGGCTTCACCAACTTGCAAAGAATTGC
                      ____________________________________________________________
consensus CATGCCCCTTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
 
. : . : . : . : . : . :
rJMSF021P22+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF019C16+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF043O23+ ACTANGCCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF046M07+ CAGTAGGAATGGCAGTATCAGCCCTNATAGAGAAGAAGA
rJMSF045M07+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF051B09+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMFF009A05+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
JMFN035K24- TA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMFF030D12+ CAGTAGGAATGGCAGTATCAGCCNTAATAGAGAAGAAGA
rJMFF031F06+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF013D23+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMFF017G14+ TGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF051I09+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
                      ____________________________________________________________
consensus ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
 
. : . : . : . : . : . :
rJMSF021P22+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF019C16+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF043O23+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF046M07+ GGTTAGCAGCTGCAAATTCGGAGGGCNGACACAACTCAACCTTAACCATGAGTGTGTTTN
rJMSF045M07+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF051B09+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMFF009A05+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
JMFN035K24- GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMFF030D12+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMFF031F06+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF013D23+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMFF017G14+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF051I09+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
                      ____________________________________________________________
consensus GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
 
. : . : . : . : . : . :
rJMSF021P22+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF019C16+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF043O23+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF046M07+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCNTTCATGTACACCGGCCAGC
rJMSF045M07+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF051B09+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF009A05+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
JMFN035K24- ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF030D12+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF031F06+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF013D23+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF017G14+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTNCATGTACACCGGCCAGC
rJMSF051I09+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF044N08+ TTCATGTACACCGGCCAGC
                      ____________________________________________________________
consensus ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
 
. : . : . : . : . : . :
rJMSF021P22+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF019C16+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF043O23+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF046M07+ TCGATTTNTTCCTCNCCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTNT
rJMSF045M07+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF051B09+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF009A05+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
JMFN035K24- TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF030D12+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF031F06+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF013D23+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF017G14+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF051I09+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF044N08+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
                      ____________________________________________________________
consensus TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
 
. : . : . : . : . : . :
rJMSF021P22+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF019C16+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF043O23+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF046M07+ NGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF045M07+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF051B09+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF009A05+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
JMFN035K24- TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF030D12+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF031F06+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF013D23+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF017G14+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF051I09+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF044N08+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
                      ____________________________________________________________
consensus TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
 
. : . : . : . : . : . :
rJMSF021P22+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF019C16+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF043O23+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF046M07+ NGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF045M07+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF051B09+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF009A05+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGACAACATCAACTACGGACGCC
JMFN035K24- TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF030D12+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF031F06+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF013D23+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF017G14+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF051I09+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF044N08+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
                      ____________________________________________________________
consensus TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
 
. : . : . : . : . : . :
rJMSF021P22+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF019C16+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF043O23+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF046M07+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATNNNNTTTGNNGTGTACCTGA
rJMSF045M07+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF051B09+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF009A05+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
JMFN035K24- TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF030D12+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF031F06+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF013D23+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF017G14+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF051I09+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF044N08+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
                      ____________________________________________________________
consensus TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
 
. : . : . : . : . : . :
rJMSF021P22+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF019C16+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF043O23+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF046M07+ TNTGCTCGATCTGGNNTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGNCGGTGA
rJMSF045M07+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF051B09+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF009A05+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
JMFN035K24- TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF030D12+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF031F06+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF013D23+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF017G14+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF051I09+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF044N08+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
                      ____________________________________________________________
consensus TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
 
. : . : . : . : . : . :
rJMSF021P22+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF019C16+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF043O23+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF046M07+ TGAATGGGAATGGNGAAGAGAATGTGTTAGTTAGTCAGCGTTTCTTCTTCATTATATTCT
rJMSF045M07+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF051B09+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF009A05+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
JMFN035K24- TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF030D12+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF031F06+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF013D23+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF017G14+ TGAATGGGAATGGAGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF051I09+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF044N08+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF047H23+ AA-GTGTTAGTTAGTTAGCGTTTTTTCTTCATTATATTTT
                      ____________________________________________________________
consensus TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
 
. : . : . : . : . : . :
rJMSF021P22+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF019C16+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF043O23+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF046M07+ T
rJMSF045M07+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF051B09+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF009A05+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
JMFN035K24- TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF030D12+ TCTTCTTTTTATGTGCAAAAACAAAAAAC--AAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF031F06+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF013D23+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF017G14+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF051I09+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF044N08+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF047H23+ TTTTCTTTTTAGGGGCAAAACCAAAAACCAAAAAAAGAGGAAGAAATTTGGGGGGGAGTT
                      ____________________________________________________________
consensus TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
 
. : . : . : . : . : . :
rJMSF021P22+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF019C16+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF043O23+ TTTTAGTTTCTAGTACTGCAACGANCAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF045M07+ TTTTAGTTTCTAGTACTGCAACGANCAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF051B09+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF009A05+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
JMFN035K24- TTTTAGTTTCTAGTACTGCAACGACAG
rJMFF030D12+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF031F06+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF013D23+ TTTTAGTTTCTAGTACTGCAACGACCAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF017G14+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF051I09+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF044N08+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF047H23+ TTTTAGTTTTTAGTACTGCAACGC-CAGTGTCCATAGAGGAATGATCCTGTGTCTTTGGG
                      ____________________________________________________________
consensus TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
 
. : . : . : . : . : . :
rJMSF021P22+ -CATTGTTGTCT
rJMSF019C16+ -CATTGTTGTCTC
rJMSF043O23+ C
rJMSF045M07+ CCATTGTTGTCTCTGTTTCTGTAT
rJMSF051B09+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTC
rJMFF009A05+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTCAA
rJMFF030D12+ -CATTGTTGTCTC
rJMFF031F06+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATT
rJMSF013D23+ -CATTGTTGTCTC
rJMFF017G14+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTCAATGGAAGT
rJMSF051I09+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTCAATGGAAGT
rJMFF044N08+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGAACAATTTCAATGGAAGTGTGTTGGAA
rJMFF047H23+ -CATTGTGGTCTCGGTTTCGGTATTGGGGTTGGACCAATTTCAAGGGAAGTGTGTTGGAA
                      ____________________________________________________________
consensus -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTCAATGGAAGTGTGTTGGAA
 
. : . : . : . : . : . :
rJMFF044N08+ T
rJMFF047H23+ TTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
                      ____________________________________________________________
consensus TTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT