| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009A05 | Sequence | 584 | 006088 (16) | gb|KDP32393.1| | 2e-50 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 720 | 004139 (15) | ref|XP_006356754.1| | 4e-62 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMFF017G14 | Sequence | 391 | 006088 (16) | ref|XP_009778211.1| | 1e-47 | PREDICTED: protein NRT1/ PTR FAMILY 6.2-like [Nicotiana sylvestris] | 693 | 004139 (15) | ref|XP_006347704.1| | 7e-54 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMFF030D12 | Sequence | 587 | 006088 (16) | gb|KDP32393.1| | 1e-70 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 650 | 004139 (15) | ref|XP_006356754.1| | 3e-53 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMFF031F06 | Sequence | 608 | 006088 (16) | gb|KDP32393.1| | 4e-65 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 716 | 004139 (15) | ref|XP_006356754.1| | 4e-62 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMFF044N08 | Sequence | 634 | 006088 (16) | gb|KDP32393.1| | 1e-71 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 573 | 004139 (15) | ref|XP_006356754.1| | 1e-31 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMFF047H23 | Sequence | 620 | 006088 (16) | gb|KDP32393.1| | 2e-67 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 277 | 004139 (15) | |||
| JMFN035K24 | Sequence | 623 | 004139 (15) | ref|XP_009608738.1| | 1e-57 | PREDICTED: protein NRT1/ PTR FAMILY 6.2-like isoform X2 [Nicotiana tomentosifor | |||||
| JMSF013D23 | Sequence | 228 | 006088 (16) | ref|XP_002281975.1| | 4e-14 | PREDICTED: protein NRT1/ PTR FAMILY 6.2-like isoform X1 [Vitis vinifera] | 733 | 004139 (15) | ref|XP_006356754.1| | 4e-73 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMSF019C16 | Sequence | 457 | 006088 (16) | ref|XP_008784904.1| | 4e-61 | PREDICTED: protein NRT1/ PTR FAMILY 6.2-like [Phoenix dactylifera] | 747 | 004139 (15) | ref|XP_006356754.1| | 2e-77 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMSF021P22 | Sequence | 647 | 006088 (16) | gb|KDP32393.1| | 2e-74 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 774 | 004139 (15) | ref|XP_006356754.1| | 4e-82 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMSF043O23 | Sequence | 743 | 006088 (16) | gb|KDP32393.1| | 2e-88 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 753 | 004139 (15) | ref|XP_009608738.1| | 6e-57 | PREDICTED: protein NRT1/ PTR FAMILY 6.2-like isoform X2 [Nicotiana tomentosifor |
| JMSF045M07 | Sequence | 743 | 006088 (16) | gb|KDP32393.1| | 6e-87 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 746 | 004139 (15) | ref|XP_006356754.1| | 4e-73 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMSF046M07 | Sequence | 540 | 004139 (15) | ref|XP_006356754.1| | 4e-45 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] | |||||
| JMSF051B09 | Sequence | 651 | 006088 (16) | gb|KDP32393.1| | 3e-76 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 787 | 004139 (15) | ref|XP_006356754.1| | 9e-76 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
| JMSF051I09 | Sequence | 670 | 006088 (16) | gb|KDP32393.1| | 3e-77 | hypothetical protein JCGZ_13318 [Jatropha curcas] | 787 | 004139 (15) | ref|XP_006356754.1| | 1e-70 | PREDICTED: nitrate transporter 1.4-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF021P22+ TCGTAGCTGCCATTCTCATCACCTTGGCTCTNTACGATCGCATCGT
rJMSF019C16+ TACGATCGCATCGT
rJMSF045M07+ TCGT
rJMSF051B09+ TACGATCGCATCGT
rJMSF013D23+ CGT
rJMSF051I09+ TACGATCGCATCGT
____________________________________________________________
consensus TCGTAGCTGCCATTCTCATCACCTTGGCTCTNTACGATCGCATCGT
. : . : . : . : . : . :
rJMSF021P22+ CATGCCCCNTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF019C16+ CATGCCCCTTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF043O23+ GGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF045M07+ CATGCCCCTTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF051B09+ CATGCCCCNTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMFF009A05+ ACCAACTTGCAAAGAATTGC
rJMFF031F06+ ACCAACTTGCAAAGAATTGC
rJMSF013D23+ CATGCCCCTTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
rJMSF051I09+ CATGCCCCTTGGAAGAAATGGAAAGGAACCCCCAGGCTTCACCAACTTGCAAAGAATTGC
____________________________________________________________
consensus CATGCCCCTTTGGAAGAAATGGAAAGGAACCCCAGGCTTCACCAACTTGCAAAGAATTGC
. : . : . : . : . : . :
rJMSF021P22+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF019C16+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF043O23+ ACTANGCCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF046M07+ CAGTAGGAATGGCAGTATCAGCCCTNATAGAGAAGAAGA
rJMSF045M07+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF051B09+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMFF009A05+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
JMFN035K24- TA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMFF030D12+ CAGTAGGAATGGCAGTATCAGCCNTAATAGAGAAGAAGA
rJMFF031F06+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF013D23+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMFF017G14+ TGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
rJMSF051I09+ ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
____________________________________________________________
consensus ACTA-GGCCTTGTTCTGTCAACAGTAGGAATGGCAGTATCAGCCCTAATAGAGAAGAAGA
. : . : . : . : . : . :
rJMSF021P22+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF019C16+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF043O23+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF046M07+ GGTTAGCAGCTGCAAATTCGGAGGGCNGACACAACTCAACCTTAACCATGAGTGTGTTTN
rJMSF045M07+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF051B09+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMFF009A05+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
JMFN035K24- GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMFF030D12+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMFF031F06+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF013D23+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMFF017G14+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
rJMSF051I09+ GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
____________________________________________________________
consensus GGTTAGCAGCTGCAAATTCGGAGGGCCGACACAACTCAACCTTAACCATGAGTGTGTTTT
. : . : . : . : . : . :
rJMSF021P22+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF019C16+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF043O23+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF046M07+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCNTTCATGTACACCGGCCAGC
rJMSF045M07+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF051B09+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF009A05+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
JMFN035K24- ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF030D12+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF031F06+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMSF013D23+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF017G14+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTNCATGTACACCGGCCAGC
rJMSF051I09+ ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
rJMFF044N08+ TTCATGTACACCGGCCAGC
____________________________________________________________
consensus ACCTAATCCCACAGTTCTTCCTGGTCGGATCTGGGGAAGCCTTCATGTACACCGGCCAGC
. : . : . : . : . : . :
rJMSF021P22+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF019C16+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF043O23+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF046M07+ TCGATTTNTTCCTCNCCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTNT
rJMSF045M07+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF051B09+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF009A05+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
JMFN035K24- TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF030D12+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF031F06+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF013D23+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF017G14+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMSF051I09+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
rJMFF044N08+ TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
____________________________________________________________
consensus TCGATTTCTTCCTCACCCAATCCCCAAAGAGCATGAAAACCATGAGCACAGGCCTCTTCT
. : . : . : . : . : . :
rJMSF021P22+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF019C16+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF043O23+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF046M07+ NGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF045M07+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF051B09+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF009A05+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
JMFN035K24- TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF030D12+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF031F06+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF013D23+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF017G14+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMSF051I09+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
rJMFF044N08+ TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
____________________________________________________________
consensus TGACCACCCTTTCCCTCGGTTTCTTCGTCAGCAGCTTCCTGGTATCTGTTGTCAAGAAGG
. : . : . : . : . : . :
rJMSF021P22+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF019C16+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF043O23+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF046M07+ NGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF045M07+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF051B09+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF009A05+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGACAACATCAACTACGGACGCC
JMFN035K24- TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF030D12+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF031F06+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF013D23+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF017G14+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMSF051I09+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
rJMFF044N08+ TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
____________________________________________________________
consensus TGACGTCAGCTAGCCATGGCGGCCAGGACTGGCTGGCAGATAACATCAACTACGGACGCC
. : . : . : . : . : . :
rJMSF021P22+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF019C16+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF043O23+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF046M07+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATNNNNTTTGNNGTGTACCTGA
rJMSF045M07+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF051B09+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF009A05+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
JMFN035K24- TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF030D12+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF031F06+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF013D23+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF017G14+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMSF051I09+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
rJMFF044N08+ TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
____________________________________________________________
consensus TGGATTTGTTCTACTGGCTTTTGGCTGGTCTGGGAGTGATTAACTTTGTTGTGTACCTGA
. : . : . : . : . : . :
rJMSF021P22+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF019C16+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF043O23+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF046M07+ TNTGCTCGATCTGGNNTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGNCGGTGA
rJMSF045M07+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF051B09+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF009A05+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
JMFN035K24- TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF030D12+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF031F06+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF013D23+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF017G14+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMSF051I09+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
rJMFF044N08+ TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
____________________________________________________________
consensus TTTGCTCGATCTGGTTTAAGCCCAGGAAGAATAAATCTGCTGTAGAAATGGAGACGGTGA
. : . : . : . : . : . :
rJMSF021P22+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF019C16+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF043O23+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF046M07+ TGAATGGGAATGGNGAAGAGAATGTGTTAGTTAGTCAGCGTTTCTTCTTCATTATATTCT
rJMSF045M07+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF051B09+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF009A05+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
JMFN035K24- TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF030D12+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF031F06+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF013D23+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF017G14+ TGAATGGGAATGGAGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMSF051I09+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF044N08+ TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
rJMFF047H23+ AA-GTGTTAGTTAGTTAGCGTTTTTTCTTCATTATATTTT
____________________________________________________________
consensus TGAATGGGAATGGTGAAGAGAA-GTGTTAGTTAGTTAGCGTTTCTTCTTCATTATATTCT
. : . : . : . : . : . :
rJMSF021P22+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF019C16+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF043O23+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF046M07+ T
rJMSF045M07+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF051B09+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF009A05+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
JMFN035K24- TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF030D12+ TCTTCTTTTTATGTGCAAAAACAAAAAAC--AAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF031F06+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF013D23+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF017G14+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMSF051I09+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF044N08+ TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
rJMFF047H23+ TTTTCTTTTTAGGGGCAAAACCAAAAACCAAAAAAAGAGGAAGAAATTTGGGGGGGAGTT
____________________________________________________________
consensus TCTTCTTTTTATGTGCAAAAACAAAAAACAAAAAAAGAAGAAGAAATTTAGGGGTGAGTT
. : . : . : . : . : . :
rJMSF021P22+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF019C16+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF043O23+ TTTTAGTTTCTAGTACTGCAACGANCAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF045M07+ TTTTAGTTTCTAGTACTGCAACGANCAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF051B09+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF009A05+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
JMFN035K24- TTTTAGTTTCTAGTACTGCAACGACAG
rJMFF030D12+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF031F06+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF013D23+ TTTTAGTTTCTAGTACTGCAACGACCAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF017G14+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMSF051I09+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF044N08+ TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
rJMFF047H23+ TTTTAGTTTTTAGTACTGCAACGC-CAGTGTCCATAGAGGAATGATCCTGTGTCTTTGGG
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consensus TTTTAGTTTCTAGTACTGCAACGA-CAGTGTACATAGAGGAATGATGCTGTGTCTTTTGG
. : . : . : . : . : . :
rJMSF021P22+ -CATTGTTGTCT
rJMSF019C16+ -CATTGTTGTCTC
rJMSF043O23+ C
rJMSF045M07+ CCATTGTTGTCTCTGTTTCTGTAT
rJMSF051B09+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTC
rJMFF009A05+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTCAA
rJMFF030D12+ -CATTGTTGTCTC
rJMFF031F06+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATT
rJMSF013D23+ -CATTGTTGTCTC
rJMFF017G14+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTCAATGGAAGT
rJMSF051I09+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTCAATGGAAGT
rJMFF044N08+ -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGAACAATTTCAATGGAAGTGTGTTGGAA
rJMFF047H23+ -CATTGTGGTCTCGGTTTCGGTATTGGGGTTGGACCAATTTCAAGGGAAGTGTGTTGGAA
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consensus -CATTGTTGTCTCTGTTTCTGTATTTGTGTTTGATCAATTTCAATGGAAGTGTGTTGGAA
. : . : . : . : . : . :
rJMFF044N08+ T
rJMFF047H23+ TTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
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consensus TTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT