Contig 004130:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046B24Sequence437010311 (2)ref|XP_009594035.1|185PREDICTED: uncharacterized protein LOC104090605 [Nicotiana tomentosiformis]396004130 (2)
JMFF049K13Sequence512010311 (2)ref|XP_009594035.1|255PREDICTED: uncharacterized protein LOC104090605 [Nicotiana tomentosiformis]509004130 (2)emb|CDP00268.1|1e-28unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF049K13+          CGCCGTCAACAGCTTCATCTAAATCTCAGAGCTTTTCCGGCCAAGAGTCTGGGGATTCTT
                      ____________________________________________________________
consensus             CGCCGTCAACAGCTTCATCTAAATCTCAGAGCTTTTCCGGCCAAGAGTCTGGGGATTCTT
 
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rJMFF049K13+          GGGATAATGTAGCTAGAATGGTTGGGGATGGGAGGTTGATTTTTTATCGGGTTGCTGACG
                      ____________________________________________________________
consensus             GGGATAATGTAGCTAGAATGGTTGGGGATGGGAGGTTGATTTTTTATCGGGTTGCTGACG
 
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rJMFF049K13+          ACTATGGGGGGCTTGATGGAGCGGAGGAGCGTTGCATGCCATTTAAGGGGAACGGAGTGG
                      ____________________________________________________________
consensus             ACTATGGGGGGCTTGATGGAGCGGAGGAGCGTTGCATGCCATTTAAGGGGAACGGAGTGG
 
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rJMFF049K13+          AGGAGTTGAAGAAGAGGTTGGAGGAAGAGACGGGGCTCGAGGGCGTTATCGTTTGCACAC
                      ____________________________________________________________
consensus             AGGAGTTGAAGAAGAGGTTGGAGGAAGAGACGGGGCTCGAGGGCGTTATCGTTTGCACAC
 
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rJMFF049K13+          GAAGCGTGTTGAATGGGAAGCTTTATCCCCTTCGGTTGGATCTTCCTCCAAACAATGCAG
rJMFF046B24+                                  ATCCCCTTCGGTTGGATCTTCCTCCAAACAATGCAG
                      ____________________________________________________________
consensus             GAAGCGTGTTGAATGGGAAGCTTTATCCCCTTCGGTTGGATCTTCCTCCAAACAATGCAG
 
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rJMFF049K13+          ATATGGCTGTTGTCGTTGTCCCATCCTCTTCTAGAGTGGCGGGAGACTTTGCAACAGCAA
rJMFF046B24+          ATATGGCTGTNGTCGTTGTCCCATCCTCTTCTAGAGTGGCGGGAGACTTTGCAACAGCAA
                      ____________________________________________________________
consensus             ATATGGCTGTTGTCGTTGTCCCATCCTCTTCTAGAGTGGCGGGAGACTTTGCAACAGCAA
 
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rJMFF049K13+          GAACGCCATTATAAAGCAACTGGCATGAGGATTAGAAGATACCCATTATGTTCTTTGATT
rJMFF046B24+          GAACGCCATTATAAAGCAACTGGCATGAGGATTAGAAGATACCCATTATGTTCTTTGATT
                      ____________________________________________________________
consensus             GAACGCCATTATAAAGCAACTGGCATGAGGATTAGAAGATACCCATTATGTTCTTTGATT
 
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rJMFF049K13+          CTTTTGGTTTTATTTAGAGTGTGGTTATCTATGAAGTTTTGTATATAGACCTTCAAAGGT
rJMFF046B24+          CTTTTGGTTTTATTTAGAGTGTGGTTATCTATGAAGTTTTGTATATAGACCTTCAAAGGT
                      ____________________________________________________________
consensus             CTTTTGGTTTTATTTAGAGTGTGGTTATCTATGAAGTTTTGTATATAGACCTTCAAAGGT
 
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rJMFF049K13+          GATAGATAAAGAGTGAAACATAGATATAG                               
rJMFF046B24+          GATAGATAAAGAGTGAAACATAGATATAGATATAGTACGGAGTAAAATTTTTTTACTTTT
                      ____________________________________________________________
consensus             GATAGATAAAGAGTGAAACATAGATATAGATATAGTACGGAGTAAAATTTTTTTACTTTT
 
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rJMFF046B24+          TTTTTTCTTAGTTGAGAGGATGAATGTGATATATTATACGTTCAGAATAAATAATGCGTG
                      ____________________________________________________________
consensus             TTTTTTCTTAGTTGAGAGGATGAATGTGATATATTATACGTTCAGAATAAATAATGCGTG
 
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rJMFF046B24+          AATGAGAAATCAATATTATATACCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGGCC
                      ____________________________________________________________
consensus             AATGAGAAATCAATATTATATACCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGGCC