Contig 004126:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018G08+                                          ANGGTGNNGAAGGTATCATATAACGAGT
                      ____________________________________________________________
consensus                                             ANGGTGNNGAAGGTATCATATAACGAGT
 
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rJMSF018G08+          TCGAGTATGCACATTNGGATTTCACGTTCTCTCACCGTGAAGAACTGNTGGCTTATGTGA
rJMFF045M17+                          GGATTTCACGTTCTCTCACCGTGAAGAACTGTTGACTTATGTGA
                      ____________________________________________________________
consensus             TCGAGTATGCACATTNGGATTTCACGTTCTCTCACCGTGAAGAACTGTTGGCTTATGTGA
 
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rJMSF018G08+          TGTCTCGTTTAATGTTAGTGGATTCGGCACCAAAGCAGCAATCTCCTCCAAAATCCTTGA
rJMFF045M17+          TGTCTCGTTTAATGTTAGTGGATTCGGCACCAAAGCAGCAATCTCCTCCAAAATCCTTGA
                      ____________________________________________________________
consensus             TGTCTCGTTTAATGTTAGTGGATTCGGCACCAAAGCAGCAATCTCCTCCAAAATCCTTGA
 
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rJMSF018G08+          AACTCAAGAAAAGCCAGAGGTGTACAGCAACTGATTAATACTGCAGCAGATGCCTGGAAA
rJMFF045M17+          AACTCAAGAAAAGCCAGAGGTGTACAGCAACTGATTAATACTGCAGCAGATGCCTGGAAA
                      ____________________________________________________________
consensus             AACTCAAGAAAAGCCAGAGGTGTACAGCAACTGATTAATACTGCAGCAGATGCCTGGAAA
 
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rJMSF018G08+          TCACCTCGAATTTTTTGTTAGGGTGCTTNCTGGTTGTTTGTCGATCATCATGTATCTGTA
rJMFF045M17+          TCACCTCGAATTTTTTGTTAGGGTGCTT-CTGGCTGTTTGTCGATCATCATGTATCTGTA
                      ____________________________________________________________
consensus             TCACCTCGAATTTTTTGTTAGGGTGCTTNCTGGTTGTTTGTCGATCATCATGTATCTGTA
 
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rJMSF018G08+          TACCTGTACTACTAAGGGGAGATCTGTTCCCCCCATGAATCTGTAATTTGTGTCACTACG
rJMFF045M17+          TACCTGTACTACTAAGGGGAGATCTGTTCCCCCCATGAATCTGTAATTTGTGTCACTACG
                      ____________________________________________________________
consensus             TACCTGTACTACTAAGGGGAGATCTGTTCCCCCCATGAATCTGTAATTTGTGTCACTACG
 
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rJMSF018G08+          TATGGCCTGTTAAGTTCCTTTGTATTTTTGGGACTAGGTTTGTTTGTCAAAGTTGTAGTA
rJMFF045M17+          TATGGCCTGTTAAGTTCCTTTGTATTTTTGGGACTAGGTTTGTTTGTCAAAGTTGTAGTA
                      ____________________________________________________________
consensus             TATGGCCTGTTAAGTTCCTTTGTATTTTTGGGACTAGGTTTGTTTGTCAAAGTTGTAGTA
 
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rJMSF018G08+          GAAGTGTTGTTTTTTTGTTTAGGGCGAGATTTGCCAATGTGTATATATATATATAAATAT
rJMFF045M17+          GAAGTGTTGTTTTTTTGTTTAGGGCGAGATTTGCCAATGTGTATATATATATATAAATAT
                      ____________________________________________________________
consensus             GAAGTGTTGTTTTTTTGTTTAGGGCGAGATTTGCCAATGTGTATATATATATATAAATAT
 
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rJMSF018G08+          ATTCTGTAGTCTATCTTTTAGGAATTCTCATCTTCGGAACCTTGTATATGTGGTTAAGAT
rJMFF045M17+          ATTCTGTAGTCTATCTTTTAGGAATTCTCATCTTCGGAACCTTGTATATGTGGTTAAGAT
                      ____________________________________________________________
consensus             ATTCTGTAGTCTATCTTTTAGGAATTCTCATCTTCGGAACCTTGTATATGTGGTTAAGAT
 
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rJMSF018G08+          GCTTTGAGAAGTTGAACAAGTACCTGAAACTGCAANCNGGCTTTCTCAGGGTTATGAATA
rJMFF045M17+          GCTTTGAGAAGTTGAACAAGTACCTGAAACTGCAA-CTTGCTTTCTCAGGGTTATGAATA
                      ____________________________________________________________
consensus             GCTTTGAGAAGTTGAACAAGTACCTGAAACTGCAANCTTGCTTTCTCAGGGTTATGAATA
 
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rJMSF018G08+          CTTGTCTATCGAT                                               
rJMFF045M17+          CTTGTCTATCGATCTGGACTCACCTCATACAAGTTTTATGATCATGTATTTTGATTGATG
                      ____________________________________________________________
consensus             CTTGTCTATCGATCTGGACTCACCTCATACAAGTTTTATGATCATGTATTTTGATTGATG