| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF045K16 | Sequence | 642 | 004125 (9) | ref|XP_009761504.1| | 1e-72 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana sylvestris] | 632 | 004125 (9) | ref|XP_009761504.1| | 9e-59 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana sylvestris] |
| JMSF009D18 | Sequence | 292 | 004125 (9) | ref|XP_004232282.1| | 1e-16 | PREDICTED: WAT1-related protein At3g28050-like [Solanum lycopersicum] | 756 | 004125 (9) | ref|XP_009761504.1| | 2e-95 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana sylvestris] |
| JMSF015D07 | Sequence | 482 | 004125 (9) | ref|XP_009599994.1| | 2e-44 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana tomentosiformis] | 773 | 004125 (9) | ref|XP_009761504.1| | 1e-96 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana sylvestris] |
| JMSF041E06 | Sequence | 780 | 004125 (9) | ref|XP_009761504.1| | 4e-98 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana sylvestris] | 741 | 004125 (9) | ref|XP_009599994.1| | 2e-72 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana tomentosiformis] |
| JMSF042K20 | Sequence | 732 | 019003 | ref|XP_009599994.1| | 2e-33 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana tomentosiformis] | 731 | 004125 (9) | ref|XP_009761504.1| | 2e-75 | PREDICTED: WAT1-related protein At3g28050-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF009D18- GAACTGTGAAGAAGCTAGCTAGCTAGCTAACGT
JMSF015D07- GATCCTAATTCATATTGACGTGAGAACTGTGAAGAAGCTAGCTAGCTAGCTAACGT
JMFF045K16- GAGAACTGTGAAGAAGCTAGCTAGCTAGCTAACGT
JMSF041E06- GAGAACTGTGAAGAAGCTAGCTAGCTAGCTAACGT
____________________________________________________________
consensus GATCCTAATTCATATTGACGTGAGAACTGTGAAGAAGCTAGCTAGCTAGCTAACGT
. : . : . : . : . : . :
JMSF009D18- TGAAGAAGAAGAAGAAGAAAGGCAGACGGGAGAGCTAGCAATTTAAGCACCACAAGTAAC
JMSF015D07- TGAAGAAGAAGAAGAAGAAAGGCAGACGGGAGAGCTAGCAATTTAAGCACCACAAGTAAC
JMFF045K16- TGAAGAAGAAGAAGAAGAAAGGCAGACGGGAGAGCTAGCAATTTAAGCACCACAAGTAAC
JMSF041E06- TGAAGAAGAAGAAGAAGAAAGGCAGACGGGAGAGCTAGCAATTTAAGCACCACAAGTAAC
____________________________________________________________
consensus TGAAGAAGAAGAAGAAGAAAGGCAGACGGGAGAGCTAGCAATTTAAGCACCACAAGTAAC
. : . : . : . : . : . :
JMSF009D18- AGAGATGGCGACGAAACCGGCCGCCGTCGTCGGAGAAAGAGGAGAGGGGCGGTACTCGAC
JMSF015D07- AGAGATGGCGACGAAACCGGCCGCCGTCGTCGGAGAAAGAGGAGAGGGGCGGTACTCGAC
JMFF045K16- AGAGATGGCGACGAAACCGGCCGCCGTCGTCGGAGAAAGAGGAGAGGGGCGGTACTCGAC
JMSF041E06- AGAGATGGCGACGAAACCGGCCGCCGTCGTCGGAGAAAGAGGAGAGGGGCGGTACTCGAC
____________________________________________________________
consensus AGAGATGGCGACGAAACCGGCCGCCGTCGTCGGAGAAAGAGGAGAGGGGCGGTACTCGAC
. : . : . : . : . : . :
JMSF009D18- GGCGATGTACAAGGAGGTGTTGCCGTTCGCGGCTTTGGTGGCGATGGAATGCATAAATGT
JMSF015D07- GGCGATGTACAAGGAGGTGTTGCCGTTCGCGGCTTTGGTGGCGATGGAATGCATAAATGT
JMFF045K16- GGCGATGTACAAGGAGGTGTTGCCGTTCGCGGCTTTGGTGACGATGGAATGCATAAATGT
JMSF041E06- GGCGATGTACAAGGAGGTGTTGCCGTTCGCGGCTTTGGTGGCGATGGAATGCATAAATGT
____________________________________________________________
consensus GGCGATGTACAAGGAGGTGTTGCCGTTCGCGGCTTTGGTGGCGATGGAATGCATAAATGT
. : . : . : . : . : . :
JMSF009D18- AGGGCTAAACACGCTGTTCAAAGCCGCAACTAATCACGGCATGAACAACCACGTCTTCAT
JMSF015D07- AGGGCTAAACACGCTGTTCAAAGCCGCAACTAATCACGGCATGAACAACCACGTCTTCAT
JMFF045K16- AGGGCTAAACACGCTGTTCAAAGCCGCAACTAATCACGGCATGAACAACCACGTCTTCAT
JMSF041E06- AGGGCTAAACACGCTGTTCAAAGCCGCAACTAATCACGGCATGAACAACCACGTCTTCAT
____________________________________________________________
consensus AGGGCTAAACACGCTGTTCAAAGCCGCAACTAATCACGGCATGAACAACCACGTCTTCAT
. : . : . : . : . : . :
JMSF009D18- CGTCTACGCTTATGCC
JMSF015D07- CGTCTACGCTTATGCCGTCGCCGCCGTCTGTCTCCTCCCCGCTCCCTTCTTCTCCGGCAG
JMFF045K16- CGTCTACGCTTATGCCGTCGCCGCCGTCTGTCTCCTCCCCGCTCCCTTCTTCTCCGGCAG
JMSF041E06- CGTCTACGCTTATGCCGTCGCCGCCGTCTGTCTCCTCCCCGCTCCCTTCTTCTCCGGCAG
____________________________________________________________
consensus CGTCTACGCTTATGCCGTCGCCGCCGTCTGTCTCCTCCCCGCTCCCTTCTTCTCCGGCAG
. : . : . : . : . : . :
JMFF045K16- ATCAAGAGTGCTTCCTCCACTTAACACCTCAATCATGCTCAAAATTTTCCTTCTGGGCGT
JMSF041E06- ATCAAGAGTGCTTCCTCCACTTAACACCTCAATCATGCTCAAAATTTTCCTTCTGGGCGT
____________________________________________________________
consensus ATCAAGAGTGCTTCCTCCACTTAACACCTCAATCATGCTCAAAATTTTCCTTCTGGGCGT
. : . : . : . : . : . :
JMFF045K16- AATCGGATGCGCGTCGCAGATAATGGGGTACACAGGAATCAACTACAGCTCTCCGACTCT
JMSF041E06- AATCGGATGCGCGTCGCAGATAATGGGGTACACAGGAATCAACTACAGCTCTCCGACTCT
____________________________________________________________
consensus AATCGGATGCGCGTCGCAGATAATGGGGTACACAGGAATCAACTACAGCTCTCCGACTCT
. : . : . : . : . : . :
JMFF045K16- TGCCTCCGCCATCAGCAATCTTGTCCCGGCTTTTACTTTCATTCTCGCACTCATTTTCAG
JMSF041E06- TGCCTCCGCCATCAGCAATCTTGTCCCGGCTTTTACTTTCATTCTCGCACTCATTTTCAG
____________________________________________________________
consensus TGCCTCCGCCATCAGCAATCTTGTCCCGGCTTTTACTTTCATTCTCGCACTCATTTTCAG
. : . : . : . : . : . :
JMFF045K16- GATGGAAACAGTAGTGTTTAGGAGTGCAACTAGCAGGGCAAAGGTTGTGGGAACTATAGT
JMSF041E06- GATGGAAACAGTAGTGTTTAGGAGTGCAACTAGCAGGGCAAAGGTTGTGGGAACTATAGT
____________________________________________________________
consensus GATGGAAACAGTAGTGTTTAGGAGTGCAACTAGCAGGGCAAAGGTTGTGGGAACTATAGT
. : . : . : . : . : . :
JMFF045K16- GTCAGTAACAGGGGCATTTGTAGTAACTCTNGTACCAGGCCCCAGAATTGCATTCACTTC
JMSF041E06- GTCAGTAACAGGGGCATTTGTAGTAACTCTGTACCAAGGCCCCAGAATTGCATTCACTTC
____________________________________________________________
consensus GTCAGTAACAGGGGCATTTGTAGTAACTCTGTTCCCAGGCCCCAGAATTGCATTCACTTC
. : . : . : . : . : . :
JMFF045K16- TACTTCA
JMSF041E06- TACTTCACCATCAAACGCAATCCAACTTCTGACCTCCACACAACCAAACTGGATGTTAGG
rJMSF015D07+ ACGCAATCCAACTTCTGACCTCCACACAACCAAACTGGATGTTAGG
rJMSF041E06+ AACCAAACTGGATGTTAGG
rJMSF009D18+ ACCTCCACACAACCAAACTGGATGTTAGG
____________________________________________________________
consensus TACTTCACCATCAAACGCAATCCAACTTCTGACCTCCACACAACCAAACTGGATGTTAGG
. : . : . : . : . : . :
JMSF041E06- TGGCCTTTTTCTTACAACAGAGTATCTTTTGGTCCCAATGTGGTATATAGTCCAGACACA
rJMSF015D07+ TGGCCTTTTTCTTACAACAGAGTATCTTTTGGTCCCAATGTGGTATATAGTCCAGACACA
rJMSF041E06+ TGGCNTTTTTCTTACAACAGAGTATCTTTTGGTCCCAATGTGGTATATAGTCCAGACACA
rJMSF042K20+ CAGACACA
rJMSF009D18+ TGGCCTTTTTCTTACAACAGAGTATCTTTTGGTCCCAATGTGGTATATAGTCCAGACACA
____________________________________________________________
consensus TGGCCTTTTTCTTACAACAGAGTATCTTTTGGTCCCAATGTGGTATATAGTCCAGACACA
. : . : . : . : . : . :
JMSF041E06- AATCATGAAGGTATACCCATCA
rJMSF015D07+ AATCATGAAGGTATACCCATCAGAAATGACTGTGGTCTTCTTCTACAACCTAACCGTTAG
rJMSF041E06+ AATCATGAAGGTATACCCATCAGAAATGACTGTGGTCTTCTTCTACAACCTAACCGTTAG
rJMSF042K20+ AATCATGAAGGTATACCCATCAGAAATGACTGTGGTCTTCTTCTACAACCTAACCGTTAG
rJMSF009D18+ AATCATGAAGGTATACCCATCAGAAATGACTGTGGTCTTCTTCTACAACCTAACCGTTAG
____________________________________________________________
consensus AATCATGAAGGTATACCCATCAGAAATGACTGTGGTCTTCTTCTACAACCTAACCGTTAG
. : . : . : . : . : . :
rJMSF015D07+ CATCCTTGCTGCAATCGTGGGTGTTTTCATGGTACCGGACCTCAATCAATGGCGGATTAG
rJMSF041E06+ CATCCTTGCTGCAATCGTGGGTGTTTTCATGGTACCGGACCTCAATCAATGGCGGATTAG
rJMSF042K20+ CATCCTTGCTGCAATCGTGGGTGTTTTCATGGTACCGGACCTCAATCAATGGCGGATTAG
rJMSF009D18+ CATCCTTGCTGCAATCGTGGGTGTTTTCATGGTACCGGACCTCAATCAATGGCGGATTAG
rJMFF045K16+ ATGGTACCGGACCTCAATCAATGGCGGATTAG
____________________________________________________________
consensus CATCCTTGCTGCAATCGTGGGTGTTTTCATGGTACCGGACCTCAATCAATGGCGGATTAG
. : . : . : . : . : . :
rJMSF015D07+ GCTGGATATCTCACTAGTCTCAATCCTATGTTCAGGGATCTTTGGGTCTTTTGTGAACAA
rJMSF041E06+ GCTGGATATCTCACTAGTCTCAATCCTATGTTCAGGGATCTTTGGGTCTTTTGTGAACAA
rJMSF042K20+ GCTGGATATCTCACTAGTCTCAATCCTATGTTCAGGGATCTTTGGGTCTTTTGTGAACAA
rJMSF009D18+ GCTGGATATCTCACTAGTCTCAATCCTATGTTCAGGGATCTTTGGGTCTTTTGTGAACAA
rJMFF045K16+ GCTGGATATCTCACTAGTCTCAATCCTATGTTCAGGGATCTNTGGGTCTTTTGTGAACAA
____________________________________________________________
consensus GCTGGATATCTCACTAGTCTCAATCCTATGTTCAGGGATCTTTGGGTCTTTTGTGAACAA
. : . : . : . : . : . :
rJMSF015D07+ TACTATCCACACATGGGCATTGAGAGTTAAAGGCCCAGTGTATGTAGCAATGTTCAAGCC
rJMSF041E06+ TACTATCCACACATGGGCATTGAGAGTTAAAGGCCCAGTGTATGTAGCAATGTTCAAGCC
rJMSF042K20+ TACTATCCACACATGGGCATTGAGAGTTAAAGGCCCAGTGTATGTAGCAATGTTCAAGCC
rJMSF009D18+ TACTATCCACACATGGGCATTGAGAGTTAAAGGCCCAGTGTATGTAGCAATGTTCAAGCC
rJMFF045K16+ TACTATCCACACATGGGCATTGAGAGTTAAAGGCCCAGTGTATGTAGCAATGTTCAAGCC
____________________________________________________________
consensus TACTATCCACACATGGGCATTGAGAGTTAAAGGCCCAGTGTATGTAGCAATGTTCAAGCC
. : . : . : . : . : . :
rJMSF015D07+ ACTGTCAATTGCCATAGCAGTAGCCATGGGAGTGATACTCTTGGGTGATACTCTCTATTT
rJMSF041E06+ ACTGTCAATTGCCATAGCAGTAGCCATGGGAGTGATACTCTTGGGTGATACTCTCTATTT
rJMSF042K20+ ACTGTCAATTGCCATAGCAGTAGCCATGGGAGTGATACTCTTGGGTGATACTCTCTATTT
rJMSF009D18+ ACTGTCAATTGCCATAGCAGTAGCCATGGGAGTGATACTCTTGGGTGATACTCTCTATTT
rJMFF045K16+ ACTGTCAATTGCCATAGCAGTAGCCATGGGAGTGATACTCTTGGGTGATACTCTCTATTT
____________________________________________________________
consensus ACTGTCAATTGCCATAGCAGTAGCCATGGGAGTGATACTCTTGGGTGATACTCTCTATTT
. : . : . : . : . : . :
rJMSF015D07+ GGGAAGCATTATTGGAGCAACAATCATAGCCATGGGATTCTACACTGTACTGTGGGGTAA
rJMSF041E06+ GGGAAGCATTATTGGAGCAACAATCATAGCCATGGGATTCT--ACTGTACTGTGGGGTAA
rJMSF042K20+ GGGAAGCATTATTGGAGCAACAATCATAGCCATGGGATTNTACACTGTACTGTGGGGTAA
rJMSF009D18+ GGGAAGCATTATTGGAGCAACAATCATAGCCATGGGATTCTACACTGTACTGTGGGGTAA
rJMFF045K16+ GGGAAGCATTATTGGAGCAACAATCATAGCCATGGGATTCTACACTGTACTGTGGGGTAA
____________________________________________________________
consensus GGGAAGCATTATTGGAGCAACAATCATAGCCATGGGATTCTACACTGTACTGTGGGGTAA
. : . : . : . : . : . :
rJMSF015D07+ AGCTCAAGAACAGGATGACTACTACAAAGAGAGTGATGATTTGGAGTCTCCTACTGCTGA
rJMSF041E06+ AGCTCAAGAACAGGATGACTACTACAAAGAGAGTGATGATTTGGAGTCTCCTACTGCTGA
rJMSF042K20+ AGCTCAAGAACAGGATGACTACTACAAAGAGAGTGATGATTTGGAGTCTCCTACTGCTGA
rJMSF009D18+ AGCTCAAGAACAGGATGACTACTACAAAGAGAGTGATGATTTGGAGTCTCCTACTGCTGA
rJMFF045K16+ AGCTCAAGAACAGGATGACTACTACAAAGAGAGTGATGATTTGGAGTCTCCTACTGCTGA
____________________________________________________________
consensus AGCTCAAGAACAGGATGACTACTACAAAGAGAGTGATGATTTGGAGTCTCCTACTGCTGA
. : . : . : . : . : . :
rJMSF015D07+ AAAGTACCCCTTGTTACAAAGTTATAAACACGAAGACGTATCAAACAGGTAGGCCATCAG
rJMSF041E06+ AAAGTACCCCTTGTTACAAAGTTATAAACACGAAGACGTATCAAACAGGTAGGCCATCAG
rJMSF042K20+ AAAGTACCCCTTGTTACAAAGTTATAAACACGAAGACGTATCAAACAGGTAGGCCATCAG
rJMSF009D18+ AAAGTACCCCTTGTTACAAAGTTATAAACACGAAGACGTATCAAACAGGTAGGCCATCAG
rJMFF045K16+ AAAGTACCCCTTGTTACAAAGTTATAAACACGAAGACGTATCAAACAGGTAGGCCATCAG
____________________________________________________________
consensus AAAGTACCCCTTGTTACAAAGTTATAAACACGAAGACGTATCAAACAGGTAGGCCATCAG
. : . : . : . : . : . :
rJMSF015D07+ ACAAAATGTGATTTGCCAAAATTGTTGTACTTAAAATATCTGTGCATATGAATTGCAAGA
rJMSF041E06+ ACAAAATGTGATTTGCCAAAATTGTTGTACTTAAAATATCTGTGCATATGAATTGCAAGA
rJMSF042K20+ ACAAAATGTGATTTGCCAAGATTGTTGTACTTAAAATATCTGTGCATATGAATTGCAAGA
rJMSF009D18+ ACAAAATGTGATTTGCCAAAATTGTTGTACTTAAAATATCTGTGCATATGAATTGCAAGA
rJMFF045K16+ ACAAAATGTGATTTGCCAAAATTGTTGTACTTAAAATATCTGTGCATATGAATTGCAAGA
____________________________________________________________
consensus ACAAAATGTGATTTGCCAAAATTGTTGTACTTAAAATATCTGTGCATATGAATTGCAAGA
. : . : . : . : . : . :
rJMSF015D07+ TCCTAAGCTGGAAACTTGCCTCCTTAGAAGCTAAGCCAGCCATGTACAGTAGTAGTTATG
rJMSF041E06+ TCCTAAGCTGGAAACTTGCCTCCTTAGAAGCTAAGCCAGCCATGTACAGTAGTAGTTATG
rJMSF042K20+ TCCTAAGCTGGAAACTTGCCTCCTTAGAAGCTAAGCCAGCCATGTACAGTAGTAGTTATG
rJMSF009D18+ TCCTAAGCTGGAAACTTGCCTCCTTAGAAGCTAAGCCAGCCATGTACAGTAGTAGTTATG
rJMFF045K16+ TCCTAAGCTGGAAACTTGCCTCCTTAGAAGCTAAGCCAGCCATGTACAGTAGTAGTTATG
____________________________________________________________
consensus TCCTAAGCTGGAAACTTGCCTCCTTAGAAGCTAAGCCAGCCATGTACAGTAGTAGTTATG
. : . : . : . : . : . :
rJMSF015D07+ TAAGATACAAAATAGGCTGCCGGCCAGCAGGAGGAAAGTGCCAGCCAGATGTGCTACCAA
rJMSF041E06+ TAAGATACAAAATAGGCTGCCGGCCAGCAGGAGGAAAGTGCCAGCCAGATGTGCTACCAA
rJMSF042K20+ TAAGATACAAAATAGGCTGCCGGCCAGCAGGAGGAAAGTGCCAGCCAGAT
rJMSF009D18+ TAAGATACAAAATAGGCTGCCGGCCAGCAGGAGGAAAGTGCCAGCCAGATGTGCTACCAA
rJMFF045K16+ TAAGATACAAAATAGGCTGCCGGCCAGCAGGAGGAAAGTGCCAGCCAGATGTGCTACCAA
____________________________________________________________
consensus TAAGATACAAAATAGGCTGCCGGCCAGCAGGAGGAAAGTGCCAGCCAGATGTGCTACCAA
. : . : . : . : . : . :
rJMSF015D07+ TTCC
rJMSF041E06+ TTCC
rJMSF009D18+ TTCC
rJMFF045K16+ TTCCTGTTTATATGTATACCTCAATGGAAAGGACAAACAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus TTCCTGTTTATATGTATACCTCAATGGAAAGGACAAACAAAAAAAAAAACTCTCCAGGGT