Contig 004121:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004H02Sequence388004121 (9)ref|XP_006339901.1|71.6PREDICTED: heat shock factor protein HSF24-like [Solanum tuberosum]579004121 (9)ref|XP_009797839.1|3e-07PREDICTED: heat shock factor protein HSF24 [Nicotiana sylvestris]
JMFF009K14Sequence518003138 (4)ref|XP_006425894.1|1e-14hypothetical protein CICLE_v10026058mg [Citrus clementina] gb|ESR39134.1| hypoth696004121 (9)ref|XP_009797839.1|1e-46PREDICTED: heat shock factor protein HSF24 [Nicotiana sylvestris]
JMFF017E10Sequence604003138 (4)ref|XP_006425894.1|6e-36hypothetical protein CICLE_v10026058mg [Citrus clementina] gb|ESR39134.1| hypoth728004121 (9)ref|XP_009797839.1|1e-53PREDICTED: heat shock factor protein HSF24 [Nicotiana sylvestris]
JMFF025D14Sequence148004121 (9)ref|XP_009589845.1|6e-14PREDICTED: heat shock factor protein HSF24 [Nicotiana tomentosiformis]
JMFF043G11Sequence645003138 (4)ref|XP_009589845.1|6e-58PREDICTED: heat shock factor protein HSF24 [Nicotiana tomentosiformis]646004121 (9)ref|XP_009797839.1|2e-21PREDICTED: heat shock factor protein HSF24 [Nicotiana sylvestris]
JMFF045E09Sequence599004121 (9)ref|XP_006339901.1|71.6PREDICTED: heat shock factor protein HSF24-like [Solanum tuberosum]603004121 (9)ref|XP_009797839.1|2e-12PREDICTED: heat shock factor protein HSF24 [Nicotiana sylvestris]
JMFF048N01Sequence431003138 (4)ref|NP_001119129.1|7e-08uncharacerized protein [Arabidopsis thaliana] gb|AEE86731.1| uncharacerized prot313004121 (9)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF017E10+ TCCAAGAACCCCGGGTCGGTGGACACTCCAGGGAAGTCGCAGTTC
rJMFF009K14+ AAGTCGCAGTTC
                      ____________________________________________________________
consensus TCCAAGAACCCCGGGTCGGTGGACACTCCAGGGAAGTCGCAGTTC
 
. : . : . : . : . : . :
rJMFF017E10+ CCGGACTTGACAGACGAAAACGAGAAGCTGAAGAGAGACAACCAGATGCTGAGCTCAGAG
rJMFF025D14+ AGCTCAGAG
rJMFF009K14+ CCGGACTTGACAGACGAAAACGAGAAGCTGAAGAGAGACAACCAGATGCTGAGCTCAGAG
                      ____________________________________________________________
consensus CCGGACTTGACAGACGAAAACGAGAAGCTGAAGAGAGACAACCAGATGCTGAGCTCAGAG
 
. : . : . : . : . : . :
rJMFF017E10+ TTGGCACAGACCAAGAAGCAGTGCGAGGNGCTGGTGACCTTCCTGACTCAGTACGTGAAG
rJMFF025D14+ TTGGCACAGACCAAGAAGCAGTGCGAGGAGNTGGTGACCTTCCTGACTCAGTACGTGAAG
rJMFF009K14+ TTGGCACAGACCAAGAAGCAGTGCGAGGAGCTGGTGACCTTCCTGACTCAGTACGTGAAG
rJMFF043G11+ CAGTGCGAGGAGCTGGTGACCTTCCTGACTCAGTACGTGAAG
                      ____________________________________________________________
consensus TTGGCACAGACCAAGAAGCAGTGCGAGGAGCTGGTGACCTTCCTGACTCAGTACGTGAAG
 
. : . : . : . : . : . :
rJMFF017E10+ GTTGTGCCCGAACAGATCAACCGCATCATGAGCCAAGGAATCTCCGGGTCCAGCCACGAC
JMFF004H02- GGGTCCAGCCACGAC
rJMFF025D14+ GTTGTGCCCGAACAGATCAACCGCATCATGAGCCAAGGAATCTCCGGGTCCAGCCACGAC
rJMFF009K14+ GTTGTGCCCGAACAGATCAACCGCATCATGAGCCAAGGAATCTCCGGGTCCAGCCACGAC
rJMFF043G11+ GTTGTGCCCGAACAGATCAACCGCATCATGAGCCAAGGAATCTCCGGGTCCAGCCACGAC
rJMFF004H02+ GGGTCCAGCCACGNC
JMFF045E09- GGGTCCAGCCACGAC
rJMFF045E09+ GAC
                      ____________________________________________________________
consensus GTTGTGCCCGAACAGATCAACCGCATCATGAGCCAAGGAATCTCCGGGTCCAGCCACGAC
 
. : . : . : . : . : . :
rJMFF017E10+ GATTCCATTAACAAGGTTGACAATTCTGCAGATCTGAATTCAAGCCAGAACAAAGATGAT
JMFF004H02- GATTCCATTAACAAGGTTGACAATTCTGCAGATCTGAATTCAAGCCAGAACAAAGATGAT
rJMFF025D14+ GATTCCATTAACAAGGTTG
rJMFF009K14+ GATTCCATTAACAAGGTTGACAATTCTGCAGATCTGAATTCAAGCCAGAACAAAGATGAT
rJMFF043G11+ GATTCCATTAACAAGGTTGACAATTCTGCAGATCTGAATTCAA-CCAGAACAAAGATGAT
rJMFF004H02+ GATTCCATTAACAAGGTTGNCAATTCTGCAGATCTGAATTCAAGCCAGAACAAAGATGAT
JMFF045E09- GATTCCATTAACAAGGTTGACAATTCTGCAGATCTGAATTCAAGCCAGAACAAAGATGAT
rJMFF045E09+ GATTCCATTAACAAGGTTGACAATTCTGCAGATCTGAATTCAAGCCAGAACAAAGATGAT
                      ____________________________________________________________
consensus GATTCCATTAACAAGGTTGACAATTCTGCAGATCTGAATTCAAGCCAGAACAAAGATGAT
 
. : . : . : . : . : . :
rJMFF017E10+ GATGATGATGATGACGAAAATGGAGAGACTTTGAAGTTATTCGGTGTGTTGTTGAAAGAG
JMFF004H02- GATGATGATGATGACGAAAATGGAGAGACTTTGAAGTTATTCGGTGTGTTGTTGAAAGAG
rJMFF009K14+ GATGATGATGATGACGAAAATGGAGAGACTTTGAAGTTATTCGGTGTGTTGTTGAAAGAG
rJMFF043G11+ GATGATGATGATGACGAAAATGGAGAGACTTTGAAGTTATTCGGTGTGTTGTTGAAAGAG
rJMFF004H02+ GATGATGATGATGACGAAAATGGAGAGACTTTGAAGTTATTCGGTGTGTTGTTGAAAGAG
JMFF045E09- GATGATGATGATGACGAAAATGGAGAGACTTTGAAGTTATTCGGTGTGTTGTTGAAAGAG
rJMFF045E09+ GATGATGATGATGACGAAAATGGAGAGACTTTGAAGTTATTCGGTGTGTTGTTGAAAGAG
                      ____________________________________________________________
consensus GATGATGATGATGACGAAAATGGAGAGACTTTGAAGTTATTCGGTGTGTTGTTGAAAGAG
 
. : . : . : . : . : . :
rJMFF017E10+ AAGAAGAGAAAGAGGGATCACGACGACAACACTGATTTCTCTGCTGCAAGTACCAAGGAG
JMFF004H02- AAGAAGAGAAAGAGGGATCACGACGACAACACTGATTTCTCTGCTGCAAGTACCAAGGAG
rJMFF009K14+ AAGAAGAGAAAGAGGGATCACGACGACAACACTGATTTCTCTGCTGCAAGTACCAAGGAG
rJMFF043G11+ AAGAAGAGAAAGAGGGATCACGACGACAACACTGATTTCTCTGCTGCAAGTACCAAGGAG
rJMFF004H02+ AAGAAGAGAAAGAGGGATCNCGACGACAACACTGATTTCTCTGCTGCAAGTACCAAGGAG
JMFF045E09- AAGAAGAGAAAGAGGGATCACGACGACAACACTGATTTCTCTGCTGCAAGTACCAAGGAG
rJMFF045E09+ AAGAAGAGAAAGAGGGATCCCGACGACAACACTGATTTCTCTGCTGCAAGTACCAAGGAG
                      ____________________________________________________________
consensus AAGAAGAGAAAGAGGGATCACGACGACAACACTGATTTCTCTGCTGCAAGTACCAAGGAG
 
. : . : . : . : . : . :
rJMFF017E10+ ATGAAGCCATCTATTGACTGCAAGAACGCACCATGGATGAAAATCTCTCCGGTGCCTGGG
JMFF004H02- ATGAAGCCATCTATTGACTGCAAGAACGCACCATGGATGAAAATCTCTCCGGTGCCTGGG
rJMFF009K14+ ATGAAGCCATCTATTGACTGCAAGAACGCACCATGGATGAAAATCTCTCCGGTGCCTGGG
rJMFF043G11+ ATGAAGCCATCTATTGACTGCAAGAACGCACCATGGATGAAAATCTCTCCGGTGCCTGGG
rJMFF004H02+ ATGAAGCCATCTATTGANTGCAAGAACGCACCATGGATGAAAATCTCTCCGGTGCCTGGG
JMFF045E09- ATGAAGCCATCTATTGACTGCAAGAACGCACCATGGATGAAAATCTCTCCGGTGCCTGGG
rJMFF048N01+ CCATGGATGAAAATTTTTCCGGTGCCTGGG
rJMFF045E09+ ATGAAGCCATCTATTGACTGCAAGAACGCACCATGGATGAAAATCTCTCCGGTGCCTGGG
                      ____________________________________________________________
consensus ATGAAGCCATCTATTGACTGCAAGAACGCACCATGGATGAAAATCTCTCCGGTGCCTGGG
 
. : . : . : . : . : . :
rJMFF017E10+ AAGAGCGGCAAAGTCTGTAACTAACGGGCTGATGCTTGTTCGCCATTTCTGTCAAGTTCA
JMFF004H02- AAGAGCGGCAAAGTCTGTAACTAACGGGCTGATGCTTGTTCGCCATTTCTGTCAAGTTCA
rJMFF009K14+ AAGAGCGGCAAAGTCTGTAACTAACGGGCTGATGCTTGTTCGCCATTTCTGTCAAGTTCA
rJMFF043G11+ AAGAGCGGCAAAGTCTGTAACTAACGGGCTGATGCTTGTTCGCCATTTCTGTCAAGTTCA
rJMFF004H02+ AAGAGCGGCAAAGTCTGTAACTAACGGGCTGATGCTTGTTCGCCATTTCTGTCAAGTTCA
JMFF045E09- AAGAGCGGCAAAGTCTGTAACTAACGGGCTGATGCTTGTTCGCCATTTCTGTCAAGTTCA
rJMFF048N01+ AAGAGCGGCAAAGTCTGTAACTAAGGGGCTGATGCTTGTTCGCCATTTTTTGCAAGTTCA
rJMFF045E09+ AAGAGCGGCAAAGTCTGTAACTAACGGGCTGATGCTTGTTCGCCATTTCTGTCAAGTTCA
                      ____________________________________________________________
consensus AAGAGCGGCAAAGTCTGTAACTAACGGGCTGATGCTTGTTCGCCATTTCTGTCAAGTTCA
 
. : . : . : . : . : . :
rJMFF017E10+ GCTAAATTCCAGTGTCTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
JMFF004H02- GCTAAATTCCAGTGTCTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
rJMFF009K14+ GCTAAATTCCAGTGTCTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
rJMFF043G11+ GCTAAATTCCAGTGTCTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
rJMFF004H02+ GCTAAATTCCAGTGTCTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
JMFF045E09- GCTAAATTCCAGTGTCTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
rJMFF048N01+ GCTAAATTCCAGTGTTTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
rJMFF045E09+ GCTAAATTCCAGTGTCTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
                      ____________________________________________________________
consensus GCTAAATTCCAGTGTCTGTGAGGGTCATAGAATGATAGGGTGACCAATATCCAACATTTT
 
. : . : . : . : . : . :
rJMFF017E10+ TATGTAAAACTAAATACATAGGTTATAAGGTTGGCTTGTGAAAATAAAAACTAAGAATAA
JMFF004H02- TATGTAAAACTAA
rJMFF009K14+ TATGTAAAACTAAATACATAGGTTATAAGGTTGGCTTGTGAAAATAAAAACTAAGAATAA
rJMFF043G11+ TATGTAAAACTAAATACATAGGTTATAAGGTTGGCTTGTGAAAATAAAAACTAAGAATAA
rJMFF004H02+ TANGTAAAACTAAATACATAGGTTATAAGGTTGGCTTGTGAAAATAAAAACTAAGAATAA
JMFF045E09- TATGTAAAACTAAATACATAGGTTATAAGGTTGGCTTGTGAAAATAAAAACTAAGAATAA
rJMFF048N01+ TATGTAAAACTAAATACATAGGTTATAAGGTTGGCTTGTGAAAATAAAAACTAAGAATAA
rJMFF045E09+ TATGTAAAACTAAATACATAGGTTATAAGGTTGGCTTGTGAAAATAAAAACTAAGAATAA
                      ____________________________________________________________
consensus TATGTAAAACTAAATACATAGGTTATAAGGTTGGCTTGTGAAAATAAAAACTAAGAATAA
 
. : . : . : . : . : . :
rJMFF017E10+ TGTTTTTCCTTGTGTCTTTGCTGTTTATTAAGACCAAATGGTATGTCTTAACAAATGAAC
rJMFF009K14+ TGTTTTTCCTTGTGTCTTTGCTGTTTATTAAGACCAAATGGTATGTCTTAACAAATGAAC
rJMFF043G11+ TGTTTTTCCTTGTGTCTTTGCTGTTTATTAAGACCAAATGGTATGTCTTAACAAATGAAC
rJMFF004H02+ TGTTTTTCCTTGTGTCTTTGCTGTTTATTAAGACCAAATGGTATGTCTTAACAAATGAAC
JMFF045E09- TGTTTTTCCTTGTGTCTTTGCTGTTTATTAAGACCAAATGGTATGTCTTAACAAATGAAC
rJMFF048N01+ TGTTTTTCCTTGGGTCTTTGCGGTTTATTAAGACCAAATGGTATGTTTTAACAAATGACC
rJMFF045E09+ TGTTTTTCCTTGTGTCTTTGCTGTTTATTAAGACCAAATGGTATGTCTTAACAAATGAAC
                      ____________________________________________________________
consensus TGTTTTTCCTTGTGTCTTTGCTGTTTATTAAGACCAAATGGTATGTCTTAACAAATGAAC
 
. : . : . : . : . : . :
rJMFF017E10+ ATTGAATTATAGTGTCTAAGAGA
rJMFF009K14+ ATTGAATTATAGTGTCTAAGAGAT
rJMFF043G11+ ATTGAATTATAGTGTCTAAGAGATATGTTGTTGTCTTGTCTA
rJMFF004H02+ ATTGAATNATAGTGTCTAAGAGATATGTTGTTGTCTTGTCTATCTACTTNGATTTACGAA
JMFF045E09- ATTGAATTATAGTGTCTAAGAGATATGTTGTTGTCTTGTCTATCTACTTTGATTTACGAA
rJMFF048N01+ ATTGAATTATAGTGTTTAAGAGATATGTTGTTGTTTTGT
rJMFF045E09+ ATTGAATTATAGTGTCTAAGAGATATGTTGTTGTCTTGTCTATCTACTTTGATTTACGAA
                      ____________________________________________________________
consensus ATTGAATTATAGTGTCTAAGAGATATGTTGTTGTCTTGTCTATCTACTTTGATTTACGAA
 
. : . : . : . : . : . :
rJMFF004H02+ AATCTCATAATTGATTGGCAGTTG
JMFF045E09- AATCTCATAATTGATTGGCAGTTGAAGTTTAACACTTTAACTAA
rJMFF045E09+ AATCTCATAATTGATTGGCAGTTGAAGTTTAACACTTTAACTAATTCAAATGAAAAAAAG
                      ____________________________________________________________
consensus AATCTCATAATTGATTGGCAGTTGAAGTTTAACACTTTAACTAATTCAAATGAAAAAAAG