| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005P05 | Sequence | 434 | 021643 | emb|CBN72504.1| | 1e-74 | putative autoinhibited H+ ATPase [Populus x canadensis] | 691 | 004120 (20) | gb|KHN35778.1| | 1e-102 | Plasma membrane ATPase 4 [Glycine soja] |
| JMFF016O18 | Sequence | 580 | 007912 (118) | ref|XP_007014221.1| | 9e-36 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 679 | 004120 (20) | emb|CAG28306.1| | 1e-89 | proton-exporting ATPase [Cucumis sativus] |
| JMFF017C11 | Sequence | 569 | 007912 (118) | ref|XP_007014221.1| | 2e-31 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 739 | 004120 (20) | gb|KHN35778.1| | 2e-102 | Plasma membrane ATPase 4 [Glycine soja] |
| JMFF019K03 | Sequence | 564 | 007912 (118) | ref|XP_007014221.1| | 5e-25 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 688 | 004120 (20) | gb|KHN35778.1| | 1e-102 | Plasma membrane ATPase 4 [Glycine soja] |
| JMFF026F11 | Sequence | 565 | 007912 (118) | ref|XP_007014221.1| | 2e-31 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 698 | 004120 (20) | gb|KHN35778.1| | 6e-106 | Plasma membrane ATPase 4 [Glycine soja] |
| JMFF027E14 | Sequence | 575 | 007912 (118) | ref|XP_007014222.1| | 9e-35 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | 683 | 004120 (20) | gb|KHN35778.1| | 4e-102 | Plasma membrane ATPase 4 [Glycine soja] |
| JMFF031J14 | Sequence | 202 | 007912 (118) | 399 | 004120 (20) | gb|ABM68570.1| | 3e-26 | plasma membrane H+ ATPase [Lilium longiflorum] | |||
| JMFF036J08 | Sequence | 568 | 007912 (118) | emb|CDP02997.1| | 3e-31 | unnamed protein product [Coffea canephora] | 729 | 004120 (20) | gb|KHN35778.1| | 3e-101 | Plasma membrane ATPase 4 [Glycine soja] |
| JMFF045C13 | Sequence | 642 | 007912 (118) | ref|XP_007014221.1| | 2e-48 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 629 | 004120 (20) | emb|CAG28306.1| | 4e-68 | proton-exporting ATPase [Cucumis sativus] |
| JMFF046M09 | Sequence | 640 | 007912 (118) | ref|XP_007014222.1| | 6e-48 | Plasma membrane ATPase 4 isoform 2 [Theobroma cacao] gb|EOY31841.1| Plasma membr | 485 | 004120 (20) | gb|AFK46374.1| | 8e-47 | unknown [Lotus japonicus] |
| JMFS010B09 | Sequence | 603 | 004120 (20) | gb|KDP35383.1| | 1e-113 | hypothetical protein JCGZ_10367 [Jatropha curcas] | |||||
| JMFS050D12 | Sequence | 633 | 004120 (20) | gb|KDP35383.1| | 9e-120 | hypothetical protein JCGZ_10367 [Jatropha curcas] | |||||
| JMFS068C11 | Sequence | 443 | 004120 (20) | ref|NP_001274848.1| | 5e-28 | plasma membrane ATPase 4-like [Solanum tuberosum] emb|CAA54045.1| H(+)-transport | |||||
| JMFS122E11 | Sequence | 484 | 004120 (20) | gb|AFK46374.1| | 7e-46 | unknown [Lotus japonicus] | |||||
| JMSF017M24 | Sequence | 219 | 007912 (118) | 761 | 004120 (20) | gb|KHN35778.1| | 1e-121 | Plasma membrane ATPase 4 [Glycine soja] | |||
| JMSF026H10 | Sequence | 631 | 007912 (118) | ref|XP_007014221.1| | 2e-35 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 753 | 004120 (20) | gb|KHN35778.1| | 3e-107 | Plasma membrane ATPase 4 [Glycine soja] |
| JMSF031N13 | Sequence | 649 | 007912 (118) | ref|XP_007014221.1| | 3e-49 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 695 | 004120 (20) | gb|KHN35778.1| | 1e-107 | Plasma membrane ATPase 4 [Glycine soja] |
| JMSF039B05 | Sequence | 632 | 007912 (118) | ref|XP_007014221.1| | 9e-28 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 820 | 004120 (20) | gb|KHN35778.1| | 9e-132 | Plasma membrane ATPase 4 [Glycine soja] |
| JMSF044H21 | Sequence | 742 | 007912 (118) | ref|XP_007014221.1| | 5e-52 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 749 | 004120 (20) | gb|KHN35778.1| | 2e-121 | Plasma membrane ATPase 4 [Glycine soja] |
| JMSF052G09 | Sequence | 689 | 007912 (118) | ref|XP_007014221.1| | 3e-52 | Plasma membrane ATPase 4 isoform 1 [Theobroma cacao] gb|EOY31840.1| Plasma membr | 937 | 004120 (20) | gb|KJB22049.1| | 1e-158 | hypothetical protein B456_004G027300 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
JMFS050D12- TG
____________________________________________________________
consensus TG
. : . : . : . : . : . :
JMFS050D12- GAATTGCGGTTGCTGATGCTACCGACGCTGCAAGAGGTGCTTCTGATATTGTGCTCACTG
____________________________________________________________
consensus GAATTGCGGTTGCTGATGCTACCGACGCTGCAAGAGGTGCTTCTGATATTGTGCTCACTG
. : . : . : . : . : . :
JMFS010B09- TATCAGTGCTGTCTTAACTAGCAGAGCAATTTTCCAGAGGA
JMFS050D12- AACCCGGGTTAAGCGTTATTATCAGTGCTGTCTTAACTAGCAGAGCAATTTTCCAGAGGA
____________________________________________________________
consensus AACCCGGGTTAAGCGTTATTATCAGTGCTGTCTTAACTAGCAGAGCAATTTTCCAGAGGA
. : . : . : . : . : . :
JMFS010B09- TGAAGAACTACACTATCTATGCTGTTTCCATCACAATTCGTATTGTGTTTGGTTTTATGC
JMFS050D12- TGAAGAACTACACTATCTATGCTGTTTCCATCACAATTCGTATTGTGTTTGGTTTTATGC
____________________________________________________________
consensus TGAAGAACTACACTATCTATGCTGTTTCCATCACAATTCGTATTGTGTTTGGTTTTATGC
. : . : . : . : . : . :
JMFS010B09- TTATTGCTTTGATATGGAAATACGACTTCTCTGCTTTTATGGTCCTGATCATAGCCATCC
JMFS050D12- TTATTGCTTTGATATGGAAATACGACTTCTCTGCTTTTATGGTCCTGATCATAGCCATCC
____________________________________________________________
consensus TTATTGCTTTGATATGGAAATACGACTTCTCTGCTTTTATGGTCCTGATCATAGCCATCC
. : . : . : . : . : . :
JMFS010B09- TGAACGATGGAACCATCATGACTATCTCAAAGGATAGAGTAAAACCATCGCCAATGCCAG
JMFS050D12- TGAACGATGGAACCATCATGACTATCTCAAAGGATAGAGTAAAACCATCGCCAATGCCAG
____________________________________________________________
consensus TGAACGATGGAACCATCATGACTATCTCAAAGGATAGAGTAAAACCATCGCCAATGCCAG
. : . : . : . : . : . :
JMFS010B09- ATAGCTGGAAACTGAAAGAGATTTTTGCCACCGGTGTTGTTCTTGGAGGTTATTTGGCAT
JMFS050D12- ATAGCTGGAAACTGAAAGAGATTTTTGCCACCGGTGTTGTTCTTGGAGGTTATTTGGCAT
rJMSF052G09+ AAAGAGATTTTTGCCACCGGTGTTGTTCTTGGAGGTTATTTGGCAT
____________________________________________________________
consensus ATAGCTGGAAACTGAAAGAGATTTTTGCCACCGGTGTTGTTCTTGGAGGTTATTTGGCAT
. : . : . : . : . : . :
JMFS010B09- TGATGACAGTCATCTTCTTCTGGGCTATGCACGATACCGACTTCTTCTCTGATAAATTTG
JMFS050D12- TGATGACAGTCATCTTCTTCTGGGCTATGCACGATACCGACTTCTTCTCTGATAAATTTG
rJMSF039B05+ G
rJMSF052G09+ TGATGACAGTCATCTTCTTCTGGGCTATGCACGATACCGACTTCTTCTCTGATAAATTTG
____________________________________________________________
consensus TGATGACAGTCATCTTCTTCTGGGCTATGCACGATACCGACTTCTTCTCTGATAAATTTG
. : . : . : . : . : . :
JMFS010B09- GGGTGAGATCACTGAGGAACAGTGATGACGAAATGATGGCTGCGCTATACCTCCAAGTCA
JMFS050D12- GGGTGAGATCACTGAGGAACAGTGATGACGAAATGATGGCTGCGCTATACCTCCAAGTCA
rJMSF039B05+ GGGTGAGATCACTGAGGAACAGTGATGACGAAATGATGGCTGCGCTATACCTCCAAGTCA
rJMSF044H21+ CAAGTCA
rJMSF052G09+ GGGTGAGATCACTGAGGAACAGTGATGACGAAATGATGGCTGCGCTATACCTCCAAGTCA
rJMSF017M24+ TACCTCCAAGTCA
____________________________________________________________
consensus GGGTGAGATCACTGAGGAACAGTGATGACGAAATGATGGCTGCGCTATACCTCCAAGTCA
. : . : . : . : . : . :
JMFS010B09- GTATTGTGAGTCAGGCTCTTATCTTTGTCACCAGATCTCGCAGCTGGTCTTTCC-TTGAA
JMFS050D12- GTATTGTGAGTCAGGCTCTTATCTTTGTCACCAGATCTCGCAGCTGGTCTTTCC-TTGAA
rJMSF039B05+ GTATTGTGAGTCAGGCTCTTATCTTTGTCACCAGATCTCGCAGCTGGTCTTTCC-TTGAA
rJMSF044H21+ GTATTGTGAGTCAGGCTCTTATCTTTGTCACCAGATCTCGCAGCTGGTCTTTCC-TTGAA
rJMSF026H10+ TGTGAGTCAGGCTCTTATCTTTGTCACCAGATCTCGCAGCTGGTCTTTCCNTTGAA
rJMSF052G09+ GTATTGTGAGTCAGGCTCTTATCTTTGTCACCAGATCTCGCAGCTGGTCTTTCC-TTGAA
rJMSF017M24+ GTATTGTGAGTCAGGCTNTTATCTTTGTCACCAGATCTCGCAGCTGGTCTTTCC-TNGAA
rJMSF031N13+ TTGAA
____________________________________________________________
consensus GTATTGTGAGTCAGGCTCTTATCTTTGTCACCAGATCTCGCAGCTGGTCTTTCC-TTGAA
. : . : . : . : . : . :
JMFS010B09- CGCCCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
JMFS050D12- CGCCCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMSF039B05+ CGCCCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMSF044H21+ CGCCCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMSF026H10+ CGCCCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMSF052G09+ CGCCCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMSF017M24+ CGCCCTGGACTTCTTCTGGNTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMSF031N13+ CGCCCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMFF027E14+ GGTTACTGCATTTTTGATTGCGCAACTGGTTGCAACCTTGATA
rJMFF016O18+ TGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMFF026F11+ CCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMFF036J08+ ACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMFF005P05+ CTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMFF019K03+ TCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
rJMFF017C11+ TTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
____________________________________________________________
consensus CGCCCTGGACTTCTTCTGGTTACTGCATTTTTGATTGCACAACTGGTTGCAACCTTGATA
. : . : . : . : . : . :
JMFS010B09- GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGAT
JMFS050D12- GCTGATTATGCGAA-CTGGGGTTTTGCTAGGAT
rJMSF039B05+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMSF044H21+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMSF026H10+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMSF052G09+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMSF017M24+ GCTGTTTATGCGAA-CTGGGGTTNTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMSF031N13+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMFF027E14+ GCTGTTTATGCAAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMFF016O18+ GCTGTTTATGCGAACCTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMFF026F11+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMFF036J08+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMFF005P05+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMFF019K03+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
rJMFF017C11+ GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
____________________________________________________________
consensus GCTGTTTATGCGAA-CTGGGGTTTTGCTAGGATTCAGGGATGTGGTTGGGGGTGGGCCGG
. : . : . : . : . : . :
rJMSF039B05+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMSF044H21+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCCTGATATCATGAAGTTTGCCAT
rJMSF026H10+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMSF052G09+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMSF017M24+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMSF031N13+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMFF027E14+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMFF016O18+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMFF026F11+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMFF036J08+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMFF005P05+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMFF019K03+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMFF017C11+ TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
rJMFF045C13+ CATTCCGCTGNATATCATGAAGTTGNCCAT
____________________________________________________________
consensus TGTGGTATGGCTTTACAGCATAGTTTTCTACATTCCGCTTGATATCATGAAGTTTGCCAT
. : . : . : . : . : . :
rJMSF039B05+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMSF044H21+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMSF026H10+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMSF052G09+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMSF017M24+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMSF031N13+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMFF027E14+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMFF016O18+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMFF026F11+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMFF036J08+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMFF005P05+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMFF019K03+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMFF017C11+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
rJMFF045C13+ TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
____________________________________________________________
consensus TCGTTACATCTTAAGCGGAAAGGCTTGGCTTAACTTGCTGGAGAACAAGACTGCCTTCAC
. : . : . : . : . : . :
rJMSF039B05+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMSF044H21+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMSF026H10+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMSF052G09+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMSF017M24+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMSF031N13+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF027E14+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF016O18+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF026F11+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF036J08+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF005P05+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF019K03+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF017C11+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF046M09+ TATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
JMFS068C11- GCACACGCTCAGAGGAC
JMFS122E11+ ATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
rJMFF045C13+ CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
____________________________________________________________
consensus CACAAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCGCAATGGGCACACGCTCAGAGGAC
. : . : . : . : . : . :
rJMSF039B05+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMSF044H21+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMSF026H10+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMSF052G09+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMSF017M24+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMSF031N13+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF027E14+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF016O18+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF026F11+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF036J08+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF005P05+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF019K03+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF017C11+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF046M09+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
JMFS068C11- TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF031J14+ GAAAAGAATAGCTACAG
JMFS122E11+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
rJMFF045C13+ TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
____________________________________________________________
consensus TCTACACGGACTTCAACCCCCAGAAGCTTCTAATCTCTTCAGCGAAAAGAATAGCTACAG
. : . : . : . : . : . :
rJMSF039B05+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMSF044H21+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMSF026H10+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMSF052G09+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMSF017M24+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMSF031N13+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF027E14+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF016O18+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF026F11+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF036J08+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF005P05+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF019K03+ GGAGCTTTCAGAAATCGCGGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF017C11+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF046M09+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
JMFS068C11- GGAGCTTTCAGAAAT--CAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF031J14+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
JMFS122E11+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
rJMFF045C13+ GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
____________________________________________________________
consensus GGAGCTTTCAGAAATCGCAGAACAGGCAAAGAGGAGAGCCGAGGTGGCTAGGCTGCGTGA
. : . : . : . : . : . :
rJMSF039B05+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMSF044H21+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMSF026H10+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMSF052G09+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMSF017M24+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMSF031N13+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF027E14+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF016O18+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF026F11+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF036J08+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF005P05+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF019K03+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF017C11+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF046M09+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
JMFS068C11- GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF031J14+ GCTGCATACNCTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
JMFS122E11+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
rJMFF045C13+ GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
____________________________________________________________
consensus GCTGCATACACTGAAGGGTCATGTGGAGTCAGTGGTGAAGCTGAAAGGGTTGGACATTGA
. : . : . : . : . : . :
rJMSF039B05+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMSF044H21+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMSF026H10+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMSF052G09+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMSF017M24+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMSF031N13+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF027E14+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF016O18+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF026F11+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF036J08+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF005P05+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF019K03+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF017C11+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF046M09+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
JMFS068C11- AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF031J14+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
JMFS122E11+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
rJMFF045C13+ AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
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consensus AACTATCCAGCAGCATTATACTCTTTAAGCCAGCTTTTAGTTATTACTTAATTGGCCACA
. : . : . : . : . : . :
rJMSF039B05+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMSF044H21+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMSF026H10+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMSF052G09+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMSF017M24+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMSF031N13+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF027E14+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF016O18+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF026F11+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF036J08+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF005P05+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF019K03+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF017C11+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF046M09+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
JMFS068C11- CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF031J14+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
JMFS122E11+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
rJMFF045C13+ CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
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consensus CCCGCTTGCATTATAGCAACATGGAATCAGATTATTATTGTTAACTCCAGACCACATCAC
. : . : . : . : . : . :
rJMSF039B05+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMSF044H21+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMSF026H10+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMSF052G09+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMSF017M24+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMSF031N13+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF027E14+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF016O18+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF026F11+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF036J08+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF005P05+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF019K03+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF017C11+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF046M09+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
JMFS068C11- AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF031J14+ AAACATATGGCCTTTTTNTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
JMFS122E11+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
rJMFF045C13+ AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
____________________________________________________________
consensus AAACATATGGCCTTTTTCTAGTAGTTAACAAATGTGTAATTTGTCTACATATAAAATGCG
. : . : . : . : . : . :
rJMSF039B05+ GCAAGCTAAGAGCTGTGAGCTCTCATCC
rJMSF044H21+ GCAAGCTAAGAGCTGTGAGCTCTC
rJMSF026H10+ GCAAGCTAAGAGCTGTGAGCTCTCATCC
rJMSF052G09+ GCAAGCTAAGAGCTGTGAGCTCTCATCC
rJMSF017M24+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTA
rJMSF031N13+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTAT
rJMFF027E14+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATCTTACT
rJMFF016O18+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACT
rJMFF026F11+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTT
rJMFF036J08+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATTT-CTAATGAATTT
rJMFF005P05+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATT
rJMFF019K03+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTG
rJMFF017C11+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATTT-CTAATGAATTT
rJMFF046M09+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATTT-CTAATGAATTT
JMFS068C11- GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATTT-CTAATGAATTT
rJMFF031J14+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATTTNCTAATGAATTT
JMFS122E11+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATTT-CTAATGAATTT
rJMFF045C13+ GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATTT-CTAATGAATTT
____________________________________________________________
consensus GCAAGCTAAGAGCTGTGAGCTCTCATCCTATGTATTTTACTTGGATTT-CTAATGAATTT
. : . : . : . : . : . :
rJMFF036J08+ CTTTCCAATATTCAATGCCAA
rJMFF017C11+ CTTTCCAATATTCAATGCCAA
rJMFF046M09+ CTTTCCAATATTCAATGCC
JMFS068C11- CTTTCCAAT
rJMFF031J14+ CTTTCCAATATT
JMFS122E11+ CTTTCCAATATTCAATGCC
rJMFF045C13+ CTTTCCAATATTCAATGCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
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consensus CTTTCCAATATTCAATGCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG