| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015F22 | Sequence | 577 | 008029 (3) | ref|XP_009631909.1| | 5e-44 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] | 613 | 004116 (3) | ref|XP_009631909.1| | 4e-71 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
| JMFF044J20 | Sequence | 647 | 008029 (3) | ref|XP_004240685.1| | 2e-59 | PREDICTED: aspartic proteinase Asp1 [Solanum lycopersicum] | 555 | 004116 (3) | ref|XP_009631909.1| | 3e-58 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
| JMSF042J08 | Sequence | 756 | 008029 (3) | ref|XP_004240685.1| | 1e-78 | PREDICTED: aspartic proteinase Asp1 [Solanum lycopersicum] | 731 | 004116 (3) | ref|XP_009631909.1| | 2e-94 | PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF042J08+ GGGGATGCAGTTTATGATGCTTCACAAGTAGTTTGGACATCAATGTCACGTG
____________________________________________________________
consensus GGGGATGCAGTTTATGATGCTTCACAAGTAGTTTGGACATCAATGTCACGTG
. : . : . : . : . : . :
rJMSF042J08+ ATTACGAGAAGCACTACTCACCAGGATCTGCAGAGCTAAATTTTGGTGGTATTAGTACAG
____________________________________________________________
consensus ATTACGAGAAGCACTACTCACCAGGATCTGCAGAGCTAAATTTTGGTGGTATTAGTACAG
. : . : . : . : . : . :
rJMSF042J08+ GGATTAAGAATCTCCTTGTAATCTTTGACAGTGGAAGTTCTTATAGCTATCTGCAATTTG
rJMFF015F22+ AGTGGAAGTTCTTATAGCTATCTGCAATTTG
____________________________________________________________
consensus GGATTAAGAATCTCCTTGTAATCTTTGACAGTGGAAGTTCTTATAGCTATCTGCAATTTG
. : . : . : . : . : . :
rJMSF042J08+ AACCATACCAAGCTTTTATTTCCTTGGTCGAGAAAGAACTGAGTGGCAAACCCTTGAGAA
rJMFF015F22+ AACCATACCAAGCTTTTATTTCCTTGGTCGAGAAAGAACTGAGTGGCAAACCCTTGAGAA
rJMFF044J20+ GCAAACCCTTGAGAA
____________________________________________________________
consensus AACCATACCAAGCTTTTATTTCCTTGGTCGAGAAAGAACTGAGTGGCAAACCCTTGAGAA
. : . : . : . : . : . :
rJMSF042J08+ AAGCAAACGATGACAATACTCTCCCACTGTGCTGGAAGGGCAGGAAGGCTTTCAAAAGTG
rJMFF015F22+ AAGCAAACGATGACAATACTCTCCCACTGTGCTGGAAGGGCAGGAAGGCTTTCAAAAGTG
rJMFF044J20+ AAGCAAACGATGACAATACTCTCCCACTGTGCTGGAAGGGCAGGAAGGCTTTCAAAAGTG
____________________________________________________________
consensus AAGCAAACGATGACAATACTCTCCCACTGTGCTGGAAGGGCAGGAAGGCTTTCAAAAGTG
. : . : . : . : . : . :
rJMSF042J08+ TACAGGATGTCAAGCAATATTTCAAACCTTACGCACTGAGTTTTGCCAAGGGGTGGAAGG
rJMFF015F22+ TACAGGATGTCAAGCAATATTTCAAACCTTACGCACTGAGCTTTGCCAAGGGGTGGAAGG
rJMFF044J20+ TACAGGATGTCAAGCAATATTTCAAACCTTACGCACTGAGCTTTGCCAAGGGGTGGAAGG
____________________________________________________________
consensus TACAGGATGTCAAGCAATATTTCAAACCTTACGCACTGAGCTTTGCCAAGGGGTGGAAGG
. : . : . : . : . : . :
rJMSF042J08+ GCAGATCTGAGTTTGAGATCCCCCCAGAATCATATCTTATCATCTCATCAAAGGGTAATG
rJMFF015F22+ GCAGATCTGAGTTTGAGATCCCCCCAGAATCATATCTTATCATCTCATCAAAGGGTAATG
rJMFF044J20+ GCAGATCTGAGTTTGAGATCCCCCCAGAATCATATCTTATCATCTCATCAAAGGGTAATG
____________________________________________________________
consensus GCAGATCTGAGTTTGAGATCCCCCCAGAATCATATCTTATCATCTCATCAAAGGGTAATG
. : . : . : . : . : . :
rJMSF042J08+ TCTGTTTGGGGGTTCTAAATGGTTCAGAAGCAGGTCTGCACGATGTTAACATCATTGGAG
rJMFF015F22+ TCTGTTTGGGGGTTCTAAATGGTTCAGAAGCAGGTCTGCACGATGTTAACATCATTGGAG
rJMFF044J20+ TCTGTTTGGGGGTTCTAAATGGTTCAGAAGCAGGTCTGCACGATGTTAACATCATTGGAG
____________________________________________________________
consensus TCTGTTTGGGGGTTCTAAATGGTTCAGAAGCAGGTCTGCACGATGTTAACATCATTGGAG
. : . : . : . : . : . :
rJMSF042J08+ ACATATCAATGCAAGATAAAATGGTGATTTATGACAACGAGAAGAAATCAATTGGATGGA
rJMFF015F22+ ACATATCAATGCAAGATAAAATGGTGATTTATGACAACGAGAAGAAATCAATTGGATGGA
rJMFF044J20+ ACATATCAATGCAAGATAAAATGGTGATTTATGACAACGAGAAGAAATCAATTGGATGGA
____________________________________________________________
consensus ACATATCAATGCAAGATAAAATGGTGATTTATGACAACGAGAAGAAATCAATTGGATGGA
. : . : . : . : . : . :
rJMSF042J08+ CTCCTGCCAAGTGTGATCAGCCACCAAAATCATCCAATATTCAGATGTAAATAGAGAACT
rJMFF015F22+ CTCCTGCCAAGTGTGATCAGCCACCAAAATCATCCAATATTCAGATGTAAATAGAGAACT
rJMFF044J20+ CTCCTGCCAAGTGTGATCAGCCCCCAAAATCATCCAATATTCAGATGTAAATAGAGAACT
____________________________________________________________
consensus CTCCTGCCAAGTGTGATCAGCCACCAAAATCATCCAATATTCAGATGTAAATAGAGAACT
. : . : . : . : . : . :
rJMSF042J08+ ACACTTTCTTATTTGTCAACTAGCAAGTGCAGCGTTATCTATATACTCACTCATATAATA
rJMFF015F22+ ACACTTTCTTATTTGTCAACTAGCAAGTGCAGCGTTATCTATATACTCACTCATATAATA
rJMFF044J20+ ACACTTTTTTATTTGTCAACTAGCAAGTGCAGCGTTATCTATATACTCCCTCATATAATA
____________________________________________________________
consensus ACACTTTCTTATTTGTCAACTAGCAAGTGCAGCGTTATCTATATACTCACTCATATAATA
. : . : . : . : . : . :
rJMSF042J08+ AAGATGATCTAAGCCCAAAGTTGACTTTTGTATTTAAAAGTATGTTGTAGAGAGCTATGA
rJMFF015F22+ AAGATGATCTAAGCCCAAAGTTGACTTTTGTATTTAAAAGTATGTTGTAGAGAGCTATGA
rJMFF044J20+ AAGATGATTTAAGCCCAAAGTTGACTTTTGTATTTAAAAGTATGTTGTAGAGAGCTATGA
____________________________________________________________
consensus AAGATGATCTAAGCCCAAAGTTGACTTTTGTATTTAAAAGTATGTTGTAGAGAGCTATGA
. : . : . : . : . : . :
rJMSF042J08+ ACTGTTTTGGTATTCCAAC
rJMFF015F22+ ACTGTTTTGGTATTCCAACTATACCATTTTAGGTATAAAAGA
rJMFF044J20+ ACTGTTTTGGTATTCCAACTATACCATTTTAGGTATAAAAGATGTGGCAAGTTTTATGTT
____________________________________________________________
consensus ACTGTTTTGGTATTCCAACTATACCATTTTAGGTATAAAAGATGTGGCAAGTTTTATGTT