| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005L21 | Sequence | 479 | 000292 (4) | ref|XP_004307223.1| | 5e-44 | PREDICTED: cycloartenol-C-24-methyltransferase [Fragaria vesca subsp. vesca] | 792 | 004115 (3) | ref|XP_009630910.1| | 6e-112 | PREDICTED: cycloartenol-C-24-methyltransferase 1-like [Nicotiana tomentosiformi |
| JMFF044I14 | Sequence | 663 | 000292 (4) | ref|XP_009630910.1| | 2e-90 | PREDICTED: cycloartenol-C-24-methyltransferase 1-like [Nicotiana tomentosiformi | 488 | 004115 (3) | ref|XP_009761578.1| | 3e-19 | PREDICTED: cycloartenol-C-24-methyltransferase 1-like [Nicotiana sylvestris] re |
| JMFF050P07 | Sequence | 590 | 000292 (4) | ref|XP_007218252.1| | 7e-59 | hypothetical protein PRUPE_ppa008084mg [Prunus persica] gb|EMJ19451.1| hypotheti | 537 | 004115 (3) | gb|AAC34951.1| | 2e-41 | S-adenosyl-methionine-sterol-C- methyltransferase [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMFF005L21+ TAACTTTGATGCTAT
____________________________________________________________
consensus TAACTTTGATGCTAT
. : . : . : . : . : . :
rJMFF005L21+ ATATGCGATTGAAGCTACTTGCCACGCACCCGATTCGGTTGGATGCTACAAGGAGGTATA
____________________________________________________________
consensus ATATGCGATTGAAGCTACTTGCCACGCACCCGATTCGGTTGGATGCTACAAGGAGGTATA
. : . : . : . : . : . :
rJMFF005L21+ TAGAGTACTCAAGCCCGGTCAGTGTTTTGCTGCTTATGAATGGTGCATGACTGATTCCTA
____________________________________________________________
consensus TAGAGTACTCAAGCCCGGTCAGTGTTTTGCTGCTTATGAATGGTGCATGACTGATTCCTA
. : . : . : . : . : . :
rJMFF005L21+ CAATCCCGACAGCTTAGAGCACAAGAAAATCAAGTCAGAAATCGAGCTTGGTAATGGCCT
____________________________________________________________
consensus CAATCCCGACAGCTTAGAGCACAAGAAAATCAAGTCAGAAATCGAGCTTGGTAATGGCCT
. : . : . : . : . : . :
rJMFF005L21+ CCCTGAAATAAGGCTGACTACGCAATGCCTTGAAGCTGCCAAGAAAGCGGGATTTGAAGT
____________________________________________________________
consensus CCCTGAAATAAGGCTGACTACGCAATGCCTTGAAGCTGCCAAGAAAGCGGGATTTGAAGT
. : . : . : . : . : . :
rJMFF005L21+ TGTTTGGGAGAAGGATCTTGCAGAGGATTCGCCTATCCCTTGGTATTTGCCGTTGGATAC
rJMFF050P07+ TCCCTTGGTATTTGCCGTTGGATAC
____________________________________________________________
consensus TGTTTGGGAGAAGGATCTTGCAGAGGATTCGCCTATCCCTTGGTATTTGCCGTTGGATAC
. : . : . : . : . : . :
rJMFF005L21+ AAGTCACTTCTCACTCAGTAGCTTCCGTCTAACAGCTGTTGGGCGTCTCGTGACCCGAAA
rJMFF050P07+ AAGTCACTTCTCACTCAGTAGCTTCCGTCTAACAGCTGTTGGGCGTCTCGTGACCCGAAA
rJMFF044I14+ ACCCGAAA
____________________________________________________________
consensus AAGTCACTTCTCACTCAGTAGCTTCCGTCTAACAGCTGTTGGGCGTCTCGTGACCCGAAA
. : . : . : . : . : . :
rJMFF005L21+ TTTGGTCAAGGCACTCGAATACGTGGGAATTGCTCCCAAAGGAAGCCAAAGGGTTCAAGA
rJMFF050P07+ TTTGGTCAAGGCACTCGAATACGTGGGAATTGCTCCCAAAGGAAGCCAAAGGGTTCAAGA
rJMFF044I14+ TTTGGTCAAGACACTCGAATACGGGGGAATTGCTCCCAAAGGAAGCCAAAGGGTTCAAGA
____________________________________________________________
consensus TTTGGTCAAGGCACTCGAATACGTGGGAATTGCTCCCAAAGGAAGCCAAAGGGTTCAAGA
. : . : . : . : . : . :
rJMFF005L21+ TTTCTTAGAGAAAGCAGCCGAAGGACTTGTTGCCGGTGGAAAGAAAGGGATCTTCACGCC
rJMFF050P07+ TTTCTTAGAGAAAGCAGCCGAAGGACTTGTTGCCGGTGGAAAGAAAGGGATCTTCACGCC
rJMFF044I14+ TTTTTTAGAGAAAACAGCCGAAGGACTTGTTGCCGGTGGAAAGAAAGGGATTTTCACGCC
____________________________________________________________
consensus TTTCTTAGAGAAAGCAGCCGAAGGACTTGTTGCCGGTGGAAAGAAAGGGATCTTCACGCC
. : . : . : . : . : . :
rJMFF005L21+ AATGTACTTCTTCGTGGTACGCAAGCCCATCTCGGCCAGTGAGTAATGTGGAAGCAAGGC
rJMFF050P07+ AATGTACTTCTTCGTGGTACGCAAGCCCATCTCGGCCAGTGAGTAATGTGGAAGCAAGGC
rJMFF044I14+ AAAGTACTTTTTTGTGGTACGCAAGCCCATTTTGGCCAGTGAGTAATGTGGAAGCAAGGC
____________________________________________________________
consensus AATGTACTTCTTCGTGGTACGCAAGCCCATCTCGGCCAGTGAGTAATGTGGAAGCAAGGC
. : . : . : . : . : . :
rJMFF005L21+ GGGCATAGTTGCGGGAAATCTACAAGAACCCATATCTGGATTCCTAGCTGGCTTAAGTTG
rJMFF050P07+ GGGCATAGTTGCGGGAAATCTACAAGAACCCATATCTGGATTCCTAGCTGGCTTAAGTTG
rJMFF044I14+ GGGCATAGTTGCGGGAAATTTTCAAGAACCCATATTTGGATTCCTAGCTGGCTTAAGTTG
____________________________________________________________
consensus GGGCATAGTTGCGGGAAATCTACAAGAACCCATATCTGGATTCCTAGCTGGCTTAAGTTG
. : . : . : . : . : . :
rJMFF005L21+ CTTGTCTGTTTTGATTGTGGTTCAACTCCAGTTTTTAACAAGTGATATTTACTTCCTGCT
rJMFF050P07+ CTTGTCTGTTTTGATTGTGGTTCAACTCCAGTTTTTAACAAGTGATATTTACTTCCTGCT
rJMFF044I14+ CTTGTCTGTTTTGATTGGGGTTCAACTCCAGTTTTTAACAAGGGATATTTACTTCCTGCT
____________________________________________________________
consensus CTTGTCTGTTTTGATTGTGGTTCAACTCCAGTTTTTAACAAGTGATATTTACTTCCTGCT
. : . : . : . : . : . :
rJMFF005L21+ TTATCTCTGTTGCGGCCCTGGGAACATTATGATGTGGTCTTCAGTGTACTACCTAGAATT
rJMFF050P07+ TTATCTCTGTTGCGGCCCTGGGAACATTATGATGTGGTCTTCAGTGTACTACCTAGAATT
rJMFF044I14+ TTATTTTTGTTGCGGCCCTGGGAACATTATGAAGTGGTTTTCAGGGTACTACCTAGAATT
____________________________________________________________
consensus TTATCTCTGTTGCGGCCCTGGGAACATTATGATGTGGTCTTCAGTGTACTACCTAGAATT
. : . : . : . : . : . :
rJMFF005L21+ AGTTCTTCCGCCGTTGATTGTGGCTAAGATTGTGAACATTGTGTTGTCTAAAGATTA
rJMFF050P07+ AGTTCTTCCGCCGTTGATTGTGGCTAAGATTGTGAACATTGTGTTGTCTAAAGATTAGAT
rJMFF044I14+ AGTTTTTCCCCCGTTGATTGTGGGTAAGATTGTGAACATTGTGTTGTTTAAAGATTAGAT
____________________________________________________________
consensus AGTTCTTCCGCCGTTGATTGTGGCTAAGATTGTGAACATTGTGTTGTCTAAAGATTAGAT
. : . : . : . : . : . :
rJMFF050P07+ TTTTAATGTGGTACAGCCC
rJMFF044I14+ TTTTAATGTGGTACAGCCCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
____________________________________________________________
consensus TTTTAATGTGGTACAGCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN