Contig 004112:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF022F04+                                                  GCTAGTCATAAACGATCNTA
                      ____________________________________________________________
consensus                                                     GCTAGTCATAAACGATCNTA
 
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rJMFF022F04+          ACGGCACCATAAAAACCCCCAAGTTTGTTGAGCGCATTAAAAAGTACTGCGATATCTGTG
                      ____________________________________________________________
consensus             ACGGCACCATAAAAACCCCCAAGTTTGTTGAGCGCATTAAAAAGTACTGCGATATCTGTG
 
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rJMFF022F04+          GAGGTCCTGCCACCTTTATCCAGGCAGCAGTCCCTCGTATTATTCAGCAAACCGAAGAGG
                      ____________________________________________________________
consensus             GAGGTCCTGCCACCTTTATCCAGGCAGCAGTCCCTCGTATTATTCAGCAAACCGAAGAGG
 
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rJMFF022F04+          TTTTCTTTAGGAAGACCATTAACATGTTGAAGGGGACTTCAGATATCTGTTGTGAAAAGA
rJMFF044C21+                  AGGAAGACCATTAACATGTTGAAGGGGACTTCAGATATCTGTTGTGAAAAGA
                      ____________________________________________________________
consensus             TTTTCTTTAGGAAGACCATTAACATGTTGAAGGGGACTTCAGATATCTGTTGTGAAAAGA
 
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rJMFF022F04+          TTAAGGAGATTCCATGTCTCACTTGCACACATAAACCACAAGGATCAATGGCTGTTATGG
rJMFF044C21+          TTAAGGAGATTCCATGTCTCACTTGCACACATAAACCACAAGGATCAATGGCTGTTATGG
                      ____________________________________________________________
consensus             TTAAGGAGATTCCATGTCTCACTTGCACACATAAACCACAAGGATCAATGGCTGTTATGG
 
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rJMFF022F04+          TAAAGCTGAATCTGTCCTTGCTAAGAGACATCAGTGATGATATTGACTTCTGCTTCAAGC
rJMFF044C21+          TAAAGCTGAATCTGTCCTTGCTAAGAGACATCAGTGATGATATTGACTTCTGCTTCAAGC
                      ____________________________________________________________
consensus             TAAAGCTGAATCTGTCCTTGCTAAGAGACATCAGTGATGATATTGACTTCTGCTTCAAGC
 
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rJMFF022F04+          TGGCCAAGGAGGAGTCTGTCATAATTCTTCCAGGATTGGCTGTGGGTCTCAAGAATTGGC
rJMFF044C21+          TGGCCAAGGAGGAGTCTGTCATAATTCTTCCAGGATTGGCTGTGGGTCTCAAGAATTGGC
                      ____________________________________________________________
consensus             TGGCCAAGGAGGAGTCTGTCATAATTCTTCCAGGATTGGCTGTGGGTCTCAAGAATTGGC
 
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rJMFF022F04+          TGCGAATTACTTTTGCTGCAGAACCATCTTCCCTTGAAGAAGCACTGGGAAGGGTTAAGT
rJMFF044C21+          TGCGAATTACTTTTGCTGCAGAACCATCTTCCCTTGAAGAAGCACTGGGAAGGGTTAAGT
                      ____________________________________________________________
consensus             TGCGAATTACTTTTGCTGCAGAACCATCTTCCCTTGAAGAAGCACTGGGAAGGGTTAAGT
 
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rJMFF022F04+          CTTTCTGTCAGAGGCATTCATATCAAGAAAATGGGCACTGCTAGTTGAAGCTAGAGTTGC
rJMFF044C21+          CTTTCTGTCAGAGGCATTCATATCAAGAAAATGGGCACTGCTAGTTGAAGCTAGAGTTGC
                      ____________________________________________________________
consensus             CTTTCTGTCAGAGGCATTCATATCAAGAAAATGGGCACTGCTAGTTGAAGCTAGAGTTGC
 
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rJMFF022F04+          GTAGAGTTAGCTTTTTACAGAATATAGAAAATGGAGTTTGATACAAATATGCAAGTAGTA
rJMFF044C21+          GTAGAGTTAGCTTTTTACAGAATATAGAAAATGGAGTTTGATACAAATATGCAAGTAGTA
                      ____________________________________________________________
consensus             GTAGAGTTAGCTTTTTACAGAATATAGAAAATGGAGTTTGATACAAATATGCAAGTAGTA
 
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rJMFF022F04+          GTGTCAATGTGTCAGTTCTCAAGAACTGATATTGTGCAATTACACCCACCTAATGGCCTT
rJMFF044C21+          GTGTCAATGTGTCAGTTCTCAAGAACTGATATTGAGCAATTACACCCACCTAATGGCCTT
                      ____________________________________________________________
consensus             GTGTCAATGTGTCAGTTCTCAAGAACTGATATTGTGCAATTACACCCACCTAATGGCCTT
 
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rJMFF022F04+          ATACTCTTACTTTGAAGCATGAAGTAGTCAAACCATATGTTCTGCATTACCATAATATAT
rJMFF044C21+          ATACTCTTACTTTGAAGCATGAAGTAGTCAAACCATATGTTCTGCATTACCATAATATAT
                      ____________________________________________________________
consensus             ATACTCTTACTTTGAAGCATGAAGTAGTCAAACCATATGTTCTGCATTACCATAATATAT
 
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rJMFF022F04+          GTACTGATTATACT                                              
rJMFF044C21+          GTACTGATTATACTTGGAAGTTGTGGTTGTAAAAGTTGAAATACATTCTTGCTTATAAAT
                      ____________________________________________________________
consensus             GTACTGATTATACTTGGAAGTTGTGGTTGTAAAAGTTGAAATACATTCTTGCTTATAAAT
 
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rJMFF044C21+          GAAAGTTACTTGTATGTCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             GAAAGTTACTTGTATGTCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG