Contig 004108:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011B21Sequence542004635 (3)ref|XP_004244902.1|3e-20PREDICTED: aspartic proteinase-like protein 2 [Solanum lycopersicum]686004108 (2)emb|CDP15549.1|6e-53unnamed protein product [Coffea canephora]
JMFF043J24Sequence629004635 (3)ref|XP_004244902.1|5e-41PREDICTED: aspartic proteinase-like protein 2 [Solanum lycopersicum]657004108 (2)emb|CDP15549.1|4e-49unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF011B21+                                         ATCGCCNTCAAAATCGGATAACAAAAATT
                      ____________________________________________________________
consensus                                            ATCGCCNTCAAAATCGGATAACAAAAATT
 
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rJMFF011B21+          CCACTGTAAATGTGGCCCCTGCTCNTACTGAACATCCTACTGAACTTCCGAGAAACATTA
                      ____________________________________________________________
consensus             CCACTGTAAATGTGGCCCCTGCTCNTACTGAACATCCTACTGAACTTCCGAGAAACATTA
 
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rJMFF011B21+          CTTCAGAAGGTATAAAAGTAGGGCATCTAACACTATACATGTCAATAAGCATAAACTACA
rJMFF043J24+             CAGAAGGTATAAAAGTAGGGCATCTAACACTATACATGTCAATAAGCATAAACTACA
                      ____________________________________________________________
consensus             CTTCAGAAGGTATAAAAGTAGGGCATCTAACACTATACATGTCAATAAGCATAAACTACA
 
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rJMFF011B21+          CCAATCTGAAGCCCCAAATTTCAGAACTTACCCAATCAATTGCCAAGGAGTTGCATGTTA
rJMFF043J24+          CCAATCTGAAGCCCCAAATTTCAGAACTTACCCAATCAATTGCCAAGGAGTTGCATGTTA
                      ____________________________________________________________
consensus             CCAATCTGAAGCCCCAAATTTCAGAACTTACCCAATCAATTGCCAAGGAGTTGCATGTTA
 
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rJMFF011B21+          ATATTTCTCAGGTCCATTTAGCAAATTTCTCATCAACTGCAAATGAATCCCTAATTAAAT
rJMFF043J24+          ATATTTCTCAGGTCCATTTAGCAAATTTCTCATCAACTGCAAATGAATCCCTAATTAAAT
                      ____________________________________________________________
consensus             ATATTTCTCAGGTCCATTTAGCAAATTTCTCATCAACTGCAAATGAATCCCTAATTAAAT
 
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rJMFF011B21+          TGACCATTTTTCCTGAGAAACCTGCACGTTACATGCACAATGCCACTGCTATGGAAATTG
rJMFF043J24+          TGACCATTTTTCCTGAGAAACCTGCACGTTACATGCACAATGCCACTGCTATGGAAATTG
                      ____________________________________________________________
consensus             TGACCATTTTTCCTGAGAAACCTGCACGTTACATGCACAATGCCACTGCTATGGAAATTG
 
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rJMFF011B21+          TTTCACGCTTGGCTGAACATCACGTGCACCTTCCTGATAATTTTGGAAGCTATGAATTGG
rJMFF043J24+          TTTCACGCTTGGCTGAACATCACGTGCACCTTCCTGATAATTTTGGAAGCTATGAATTGG
                      ____________________________________________________________
consensus             TTTCACGCTTGGCTGAACATCACGTGCACCTTCCTGATAATTTTGGAAGCTATGAATTGG
 
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rJMFF011B21+          TGGGATGGAGTACTGAGCCCCCTCCAAAACGAACGTGGTGGCAGGAAAATAACGTGGCTA
rJMFF043J24+          TGGGATGGAGTACTGAGCCCCCTCCAAAACGAACGTGGTGGCAGGAAAATAACGTGGCTA
                      ____________________________________________________________
consensus             TGGGATGGAGTACTGAGCCCCCTCCAAAACGAACGTGGTGGCAGGAAAATAACGTGGCTA
 
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rJMFF011B21+          TAGTTGCTGCATTAGTTGCTCTAGTGATACTCGGATTATCAGCTTCTTTGGGATGGTTTA
rJMFF043J24+          TAGTTGCTGCATTAGTTGCTCTAGTGATACTCGGATTATCAGCTTCTTTGGGATGGTTTA
                      ____________________________________________________________
consensus             TAGTTGCTGCATTAGTTGCTCTAGTGATACTCGGATTATCAGCTTCTTTGGGATGGTTTA
 
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rJMFF011B21+          TTTGGAAGCGTAGACAACAATCACCAATGTCGTATAAGCCTGTAGATACCGCAAATCCTG
rJMFF043J24+          TTTGGAAGCGTAGACAACAATCACCAATGTCGTATAAGCCTGTAGATACCGCAAATCCTG
                      ____________________________________________________________
consensus             TTTGGAAGCGTAGACAACAATCACCAATGTCGTATAAGCCTGTAGATACCGCAAATCCTG
 
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rJMFF011B21+          AGCAAGAACTCCAGCCTCTATGAAGATGCAGTGGCCTTTCCCTGAAGATATGCATTGCAG
rJMFF043J24+          AGCAAGAACTCCAGCCTCTATGAAGATGCAGTGGTCTTTCCCTGAAGATATGCATTGCAG
                      ____________________________________________________________
consensus             AGCAAGAACTCCAGCCTCTATGAAGATGCAGTGGTCTTTCCCTGAAGATATGCATTGCAG
 
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rJMFF011B21+          AAGACATATATGGCCGCTATTTTTTAAAGGGTATGCTTACTATTTTAACCCGAGTTA   
rJMFF043J24+          AAGACATATATGGCCGCTATTTTTTAAAGGGTATGCTTACTATTTTAACCCGAGTTACAG
                      ____________________________________________________________
consensus             AAGACATATATGGCCGCTATTTTTTAAAGGGTATGCTTACTATTTTAACCCGAGTTACAG
 
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rJMFF043J24+          GTTAATTAAAGTTTTGTCAAGCAAAAAAAAAAAAAAAACTCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             GTTAATTAAAGTTTTGTCAAGCAAAAAAAAAAAAAAAACTCAGGGTGATCCGCCATAAGG