Contig 004106:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M20Sequence388008805 (6)730004106 (5)ref|XP_009615190.1|8e-88PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis] ref|XP_0096
JMFF025K03Sequence566008805 (6)760004106 (5)ref|XP_009615190.1|4e-89PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis] ref|XP_0096
JMFF028A05Sequence503008805 (6)687004106 (5)emb|CDP19148.1|2e-70unnamed protein product [Coffea canephora]
JMFF043I05Sequence637008805 (6)633004106 (5)emb|CDP19148.1|4e-49unnamed protein product [Coffea canephora]
JMSF001P14Sequence276008805 (6)678004106 (5)ref|XP_009615190.1|7e-79PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis] ref|XP_0096

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF002M20+ TGAGCATTGAGATTCTCAAGGCGGCTGGT
rJMFF025K03+ CTTGCAGCCNTGAGCATTGAGATTCTCAAGGCGGCTGGT
                      ____________________________________________________________
consensus CTTGCAGCCNTGAGCATTGAGATTCTCAAGGCGGCTGGT
 
. : . : . : . : . : . :
rJMFF002M20+ GAGCGAAGTAGTGGGTCTCTTGATGGGGTAGCCTTTCTTCTTAGTTCAGACTTCC-TTGG
rJMSF001P14+ ATGGGGTAGCCTTTCTTCTTAGTTCAGACTTCC-TTGG
rJMFF028A05+ ATGGGGTAGCCTTTCTTCTTAGTTCAGACTTCCTTTGG
rJMFF025K03+ GAGCGAAGTAGTGGGTCTCTTGATGGGGTAGCCTTTCTTCTTAGTTCAGACTTCC-TTGG
                      ____________________________________________________________
consensus GAGCGAAGTAGTGGGTCTCTTGATGGGGTAGCCTTTCTTCTTAGTTCAGACTTCC-TTGG
 
. : . : . : . : . : . :
rJMFF002M20+ AGATCCTGCTGCTACTTATGCTGTTGCCGACAGCATAGCTAGGTCGGAGGACGAGGCTGT
rJMSF001P14+ AGATCCTGCTGCTACTTATGCTGTTGCCGACAGCATAGCTAGGTCGGAGGACGAGGCTGT
rJMFF028A05+ AGATCCTGCTGCTACTTATGCTGTTGCCGACAGCATAGCTAGGTCGGAGGACGAGGCTGT
rJMFF025K03+ AGATCCTGCTGCTACTTATGCTGTTGCCGACAGCATAGCTAGGTCGGAGGACGAGGCTGT
                      ____________________________________________________________
consensus AGATCCTGCTGCTACTTATGCTGTTGCCGACAGCATAGCTAGGTCGGAGGACGAGGCTGT
 
. : . : . : . : . : . :
rJMFF002M20+ AGCTCCGGAGCTTAGGTCTTTTCTTCACGAGCATTGGTCAGAAGCAGCAGCAATAGAAGG
rJMSF001P14+ AGCTCCGGAGCTTAGGTCTTTTCTTCACGAGCATTGGTCAGAAGCAGCAGCAATAGAAGG
rJMFF028A05+ AGCTCCGGAGCTTAGGTCTTTTCTTCACGAGCATTGGTCAGAAGCAGCAGCAATAGAAGG
rJMFF025K03+ AGCTCCGGAGCTTAGGTCTTTTCTTCACGAGCATTGGTCAGAAGCAGCAGCAATAGAAGG
rJMFF043I05+ CGAGCATTGGTCAGAAGCAGCAGCAATAGAAGG
                      ____________________________________________________________
consensus AGCTCCGGAGCTTAGGTCTTTTCTTCACGAGCATTGGTCAGAAGCAGCAGCAATAGAAGG
 
. : . : . : . : . : . :
rJMFF002M20+ AAAGAGGCAAGGTGAGGAGCATTACCTGAATCTGGTGCGGATTATGAACTTGGGTGAGTC
rJMSF001P14+ AAAGAGGCAAGGTGAGGAGCATTACCTGAATCTGGTGCGGATTATGAACTTGGGTGAGTC
rJMFF028A05+ AAAGAGGCAAGGTGAGGAGCATTACCTGAATCTGGTGCGGATTATGAACTTGGGTGAGTC
rJMFF025K03+ AAAGAGGCAAGGTGAGGAGCATTACCTGAATCTGGTGCGGATTATGAACTTGGGTGAGTC
rJMFF043I05+ AAAGAGGCAAGGTGAGGAGCATTACCTGAATCTGGTGCGGATTATGAACTTGGGTGAGTC
                      ____________________________________________________________
consensus AAAGAGGCAAGGTGAGGAGCATTACCTGAATCTGGTGCGGATTATGAACTTGGGTGAGTC
 
. : . : . : . : . : . :
rJMFF002M20+ TCCAATCTGTTTGAGGGATCTTCCATCTCCACTCAGGATTGCAATAGCATACCTGCCTCT
rJMSF001P14+ TCCAATCTGTTTGAGGGATCTTCCATCTCCACTCAGGATTGCAATAGCATACCTGCCTCT
rJMFF028A05+ TCCAATCTGTTTGAGGGATCTTCCATCTCCACTCAGGATTGCAATAGCATACCTGCCTCT
rJMFF025K03+ TCCAATCTGTTTGAGGGATCTTCCATCTCCACTCAGGATTGCAATAGCATACCTGCCTCT
rJMFF043I05+ TCCAATCTGTTTGAGGGATCTTCCATCTCCACTCAGGATTGCAATAGCATACCTGCCTCT
                      ____________________________________________________________
consensus TCCAATCTGTTTGAGGGATCTTCCATCTCCACTCAGGATTGCAATAGCATACCTGCCTCT
 
. : . : . : . : . : . :
rJMFF002M20+ GTATAGGGAGTGTGTCAAGGCAGGAGGTTGCTTGCTATCACAGAGGCTTAGAGGACAGCT
rJMSF001P14+ GTATAGGGAGTGTGTCAAGGCAGGAGGTTGCTTGCTATCACAGAGGCTTAGAGGACAGCT
rJMFF028A05+ GTATAGGGAGTGTGTCAAGGCAGGAGGTTGCTTGCTATCACAGAGGCTTAGAGGACAGCT
rJMFF025K03+ GTATAGGGAGTGTGTCAAGGCAGGAGGTTGCTTGCTATCACAGAGGCTTAGAGGACAGCT
rJMFF043I05+ GTATAGGGAGTGTGTCAAGGCAGGAGGTTGCTTGCTATCACAGAGGCTTAGAGGACAGCT
                      ____________________________________________________________
consensus GTATAGGGAGTGTGTCAAGGCAGGAGGTTGCTTGCTATCACAGAGGCTTAGAGGACAGCT
 
. : . : . : . : . : . :
rJMFF002M20+ TGTGGAGGCGGCCAAAAGGCTGAGTGGAGTCACGCTTGAAGATGCTAGGCAAGGAAGAGA
rJMSF001P14+ TGTGGAGGCGGCCAAAAGGCTGAGTGGAGTCACGCTTGAAGATGCTAGGCAAGGAAGAGA
rJMFF028A05+ TGTGGAGGCGGCCAAAAGGCTGAGTGGAGTCACGCTTGAAGATGCTAGGCAAGGAAGAGA
rJMFF025K03+ TGTGGAGGCGGCCAAAAGGCTGAGTGGAGTCACGCTTGAAGATGCTAGGCAAGGAAGAGA
rJMFF043I05+ TGTGGAGGCGGCCAAAAGGCTGAGTGGAGTCACGCTTGAAGATGCTAGGCAAGGAAGAGA
                      ____________________________________________________________
consensus TGTGGAGGCGGCCAAAAGGCTGAGTGGAGTCACGCTTGAAGATGCTAGGCAAGGAAGAGA
 
. : . : . : . : . : . :
rJMFF002M20+ GTTACTGGGCATTTTAGAGCATAATCTTCCTACATTTTTGCTAAATGCATAAATTAAATT
rJMSF001P14+ GTTACTGGGCATTTTAGAGCATAATCTTCCTACATTTTTGCTAAATGCATAAATTAAATT
rJMFF028A05+ GTTACTGGGCATTTTAGAGCATAATCTTCCTACATTTTTGCTAAATGCATAAATTAAATT
rJMFF025K03+ GTTACTGGGCATTTTAGAGCATAATCTTCCTACATTTTTGCTAAATGCATAAATTAAATT
rJMFF043I05+ GTTACTGGGCATTTTAGAGCATAATCTTCCTACATTTTTGCTAAATGCATAAATTAAATT
                      ____________________________________________________________
consensus GTTACTGGGCATTTTAGAGCATAATCTTCCTACATTTTTGCTAAATGCATAAATTAAATT
 
. : . : . : . : . : . :
rJMFF002M20+ AATTACACCCCATACCCATACCATGCATGGAGTAGTAGTAAGTACAAGTTGTATTTGAGG
rJMSF001P14+ AATTACACCCCATACCCATACCATGCATGGAGTAGTAGTAAGTACAAGTTGTATTTGAGG
rJMFF028A05+ AATTACACCCCATACCCATACCATGCATGGAGTAGTAGTAAGTACAAGTTGTATTTGAGG
rJMFF025K03+ AATTACACCCCATACCCATACCATGCATGGAGTAGTAGTAAGTACAAGTTGTATTTGAGG
rJMFF043I05+ AATTACACCCCATACCCATACCATGCATGGAGTAGTAGTAAGTACAAGTTGTATTTGAGG
                      ____________________________________________________________
consensus AATTACACCCCATACCCATACCATGCATGGAGTAGTAGTAAGTACAAGTTGTATTTGAGG
 
. : . : . : . : . : . :
rJMFF002M20+ TTCAGGAATTTTATTTTAATAATACAATAGTTAGTAGTTGGGTTCAATGGTGAGAAAGCT
rJMSF001P14+ TTCAGGAATTTTATTTTAATAATACAATAGTTAGTAGTTGGGTTCAATGGTGAGAAAGCT
rJMFF028A05+ TTCAGGAATTTTATTTTAATAATACAATAGTTAGTAGTTGGGTTCAATGGTGAGAAAGCT
rJMFF025K03+ TTCAGGAATTTTATTTTAATAATACAATAGTTAGTAGTTGGGTTCAATGGTGAGAAAGCT
rJMFF043I05+ TTCAGGAATTTTATTTTAATAATACAATAGTTAGTAGTTGGGTTCAATGGTGAGAAAGCT
                      ____________________________________________________________
consensus TTCAGGAATTTTATTTTAATAATACAATAGTTAGTAGTTGGGTTCAATGGTGAGAAAGCT
 
. : . : . : . : . : . :
rJMFF002M20+ GCTGGGTGGAGACTATCATGATGTACAGTAGTAGAATGTTTTCTTAGAGATAAAACCACC
rJMSF001P14+ GCTGGGTGGAGACTATCATGATGTACAGTAGTAGAATGTTTTCTTAGAGATAAAACCACC
rJMFF028A05+ GCTGGGTGGAGACTATCATGATGTACAGTAGTAGAATGTTTTCTTAGAGATAAAACCACC
rJMFF025K03+ GCTGGGTGGAGACTATCATGATGTACAGTAGTAGAATGTTTTCTTAGAGATAAAACCACC
rJMFF043I05+ GCTGGGTGGAGACTATCATGATGTACAGTAGTAGAATGTTTTCTTAGAGATAAAACCACC
                      ____________________________________________________________
consensus GCTGGGTGGAGACTATCATGATGTACAGTAGTAGAATGTTTTCTTAGAGATAAAACCACC
 
. : . : . : . : . : . :
rJMFF002M20+ CGCTCGGAGTTGAGTTCTGTAAGTGGAAATTGAACACAAGTA
rJMSF001P14+ CGCTCGGAGTTGAGTTCTGTAAGTGGAAAT
rJMFF028A05+ CGCTCGGAGTTGAGTTCTGTAAGTGGAAATTGAACACAAGTA
rJMFF025K03+ CGCTCGGAGTTGAGTTCTGTAAGTGGAAATTGAACACAAGTATGAATATGAATATGAATA
rJMFF043I05+ CGCTCGGAGTTGAGTTCTGTAAGTGGAAATTGAACACAAGTATGAATATGAATATGAATA
                      ____________________________________________________________
consensus CGCTCGGAGTTGAGTTCTGTAAGTGGAAATTGAACACAAGTATGAATATGAATATGAATA
 
. : . : . : . : . : . :
rJMFF025K03+ TA
rJMFF043I05+ TAATAATTAATTAATTTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TAATAATTAATTAATTTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG