clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF005M09 | Sequence | 507 | 013272 (5) | ref|XP_010318446.1| | 3e-80 | PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco | 729 | 004100 (9) | emb|CAN80220.1| | 4e-120 | hypothetical protein VITISV_027893 [Vitis vinifera] |
JMFF011A13 | Sequence | 513 | 013272 (5) | gb|KDO53742.1| | 2e-116 | hypothetical protein CISIN_1g014332mg [Citrus sinensis] | 729 | 004100 (9) | emb|CAN80220.1| | 2e-106 | hypothetical protein VITISV_027893 [Vitis vinifera] |
JMFF018K20 | Sequence | 466 | 004100 (9) | emb|CAN80220.1| | 7e-26 | hypothetical protein VITISV_027893 [Vitis vinifera] | 807 | 004100 (9) | emb|CAN80220.1| | 2e-104 | hypothetical protein VITISV_027893 [Vitis vinifera] |
JMFF022C14 | Sequence | 343 | 004100 (9) | ||||||||
JMFF042L18 | Sequence | 645 | 013272 (5) | ref|XP_010318446.1| | 2e-112 | PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco | 612 | 004100 (9) | emb|CAN80220.1| | 4e-68 | hypothetical protein VITISV_027893 [Vitis vinifera] |
JMFN017P18 | Sequence | 606 | 004100 (9) | emb|CAN80220.1| | 7e-96 | hypothetical protein VITISV_027893 [Vitis vinifera] | |||||
JMSF009B23 | Sequence | 268 | 013272 (5) | ref|XP_006493392.1| | 3e-54 | PREDICTED: 26S protease regulatory subunit 7-like [Citrus sinensis] | 770 | 004100 (9) | gb|ABR25957.1| | 1e-132 | 26S protease regulatory subunit 7 [Oryza sativa Indica Group] |
JMSF011A09 | Sequence | 202 | 013272 (5) | ref|XP_010318446.1| | 3e-17 | PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco | 779 | 004100 (9) | gb|ACU19621.1| | 5e-135 | unknown [Glycine max] |
This contig is upended
. : . : . : . : . : . :
JMFF018K20- AAAGAACCTTATC
____________________________________________________________
consensus AAAGAACCTTATC
. : . : . : . : . : . :
JMFF018K20- ATCTCCTCTCTCTCTAAAAGTCATTCAGTCTCCACTGCTACAGAGTGAATCATGGCCGAC
____________________________________________________________
consensus ATCTCCTCTCTCTCTAAAAGTCATTCAGTCTCCACTGCTACAGAGTGAATCATGGCCGAC
. : . : . : . : . : . :
JMFF018K20- GCTATCATCTCCATTGTTGTGGATCAGCTGTCCATCATCATCAAGGAACAAGCCCAGGAG
____________________________________________________________
consensus GCTATCATCTCCATTGTTGTGGATCAGCTGTCCATCATCATCAAGGAACAAGCCCAGGAG
. : . : . : . : . : . :
JMFF018K20- CTAAGAGCAGCGTTGGGTGTGGAGAAGGAGATCAAAAACCTCTCATCAAAGCTCAACAAA
rJMFF018K20+ AAAGCTCAACAAA
____________________________________________________________
consensus CTAAGAGCAGCGTTGGGTGTGGAGAAGGAGATCAAAAACCTCTCATCAAAGCTCAACAAA
. : . : . : . : . : . :
JMFF018K20- ATCAGGG-CGGTGTTGGTCGATGCAGAGAGGAGAAGCTTCAAGGAAGAGAGCGTCAAGCT
rJMFF018K20+ ATCAGGGCCGGTGTTGGTCGATGCAGAGAGGAGAAGCTTCAAGGAAGAGAGCGTCAAGCT
____________________________________________________________
consensus ATCAGGGCCGGTGTTGGTCGATGCAGAGAGGAGAAGCTTCAAGGAAGAGAGCGTCAAGCT
. : . : . : . : . : . :
JMFF018K20- GTGGGTGGAAGAGATGAAAGCCTTCTGCTATGATGTGGAAGATGTTCTTGACGAGTGGAG
rJMFF005M09+ GGAG
rJMSF011A09+ GGAG
rJMSF009B23+ GGAG
rJMFF018K20+ GTGGGTGGAAGAGATGAAAGCCTTCTGCTATGATGTGGAAGATGTTCTTGACGAGTGGAG
rJMFF011A13+ AAGTAGATGNTATTGGGGGAG
____________________________________________________________
consensus GTGGGTGGAAGAGATGAAAGCCTTCTGCTATGATGTGGAAGATGTTCTTGACGAGTGGAG
. : . : . : . : . : . :
JMFF018K20- CACGATTTGATGATGGTGTAGGGGGAGACAATGAAGTTCAACGAACTATGCTTGAAATTG
rJMFF005M09+ CACGATTTGATGATGGTGTAGGGGGAGACAATGAAGTTCAACGAACTATGCTTGAAATTG
rJMSF011A09+ CACGATTTGATGATGGTGTAGGGGGAGACAATGAAGTTCAACGAACTATGCTTGAAATTG
rJMSF009B23+ CACGATTTGATGATGGTGTAGGGGGAGACAATGAAGTTCAACGAACTATGCTTGAAATTG
JMFN017P18- TGAAGTTCAACGAACTATGCTTGAAATTG
rJMFF018K20+ CACGATTTGATGATGGTGTAGGGGGAGACAATGAAGTTCAACGAACTATGCTTGAAATTG
rJMFF011A13+ CACGATTTGATGATGGTGTAGGGGGAGACAATGAAGTTCAACGAACTATGCTTGAAATTG
____________________________________________________________
consensus CACGATTTGATGATGGTGTAGGGGGAGACAATGAAGTTCAACGAACTATGCTTGAAATTG
. : . : . : . : . : . :
JMFF018K20- TGAACCAGCTTGATGGCTTTGATGCACGTGGGAATATTAAAGTACTCATGGCAACAAATA
rJMFF005M09+ TGAACCAGCTTGATGGCTTTGATGCACGTGGGAATATTAAAGTACTCATGGCAACAAATA
rJMSF011A09+ TGAACCAGCTTGATGGCTTTGATGCACGTGGGAATATTAAAGTACTCATGGCAACAAATA
rJMSF009B23+ TGAACCAGCTTGATGGCTTTGATGCACGTGGGAATATTAAAGTACTCATGGCAACAAATA
JMFN017P18- TGAACCAGCTTGATGGCTTTGATGCACGTGGGAATATTAAAGTACTCATGGCAACAAATA
rJMFF018K20+ TGAACCAGCTTGATGGCTTTGATGCACGTGGGAATATTAAAGTACTCATGGCAACAAATA
rJMFF011A13+ TGAACCAGCTNGATGGCTTTGATGCACGTGGGAATATTAAAGTACTCATGGCAACAAATA
rJMFF042L18+ CATGGCAACAAATA
____________________________________________________________
consensus TGAACCAGCTTGATGGCTTTGATGCACGTGGGAATATTAAAGTACTCATGGCAACAAATA
. : . : . : . : . : . :
JMFF018K20- GACCTGACACCCTTGATCCAGCACTACTGCGTCC
rJMFF005M09+ GACCTGACACCCTTGATCCAGCACTACTGCGTCCTGGACGGTTGGATCGCAAAGTCGAGT
rJMSF011A09+ GACCTGACACCCTTGATCCAGCACTACTGCGTCCTGGACGGTTGGATCGCAAAGTCGAGT
rJMSF009B23+ GACCTGACACCCTTGATCCAGCACTACTGCGTCCTGGACGGTTGGATCGCAAAGTCGAGT
JMFN017P18- GACCTGACACCCTTGATCCAGCACTACTGCGTCCTGGACGGTTGGATCGCAAAGTCGAGT
rJMFF018K20+ GACCTGACACCCTTGATCCAGCACTACTGCGTCCTGGACGGTTGGATCGCAAAGTCGAGT
rJMFF011A13+ GACNTGACACCCTTGATCCAGCACTACTGCGTCCTGGACGGTTGGATCGCAAAGTCGAGT
rJMFF042L18+ GACCTGACACCC-TGATCCAGCACTACTGCGTCCTGGACGGTTGGATCGCAAAGTCGAGT
____________________________________________________________
consensus GACCTGACACCCTTGATCCAGCACTACTGCGTCCTGGACGGTTGGATCGCAAAGTCGAGT
. : . : . : . : . : . :
rJMFF005M09+ TTGGTTTGCCTGATCTGGAAAGCAGGACACAGATTTTCAAGATTCACACGAGGACAATGA
rJMSF011A09+ TTGGTTTGCCTGATCTGGAAAGCAGGACACAGATTTTCAAGATTCACACGAGGACAATGA
rJMSF009B23+ TTGGTTTGCCTGATCTGGAAAGCAGGACACAGATTTTCAAGATTCACACGAGGACAATGA
JMFN017P18- TTGGTTTGCCTGATCTGGAAAGCAGGACACAGATTTTCAAGATTCACACGAGGACAATGA
rJMFF018K20+ TTGGTTTGCCTGATCTGGAAAGCAGGACACAGATTTTCAAGATTCACACGAGGACAATGA
rJMFF011A13+ TTGGTTTGCCTGATCTGGAAAGCAGGACACAGATTTTCAAGATTCACACGAGGACAATGA
rJMFF042L18+ TTGGTTTGCCTGATCTGGAAAGCAGGACACAGATTTTCAAGATTCACACGAGGACAATGA
____________________________________________________________
consensus TTGGTTTGCCTGATCTGGAAAGCAGGACACAGATTTTCAAGATTCACACGAGGACAATGA
. : . : . : . : . : . :
rJMFF005M09+ ACTGTGAAAGAGACATCCGTTTTGAACTTCTAGCCCGTCTTTGTCCCAACTCTACCGGAG
rJMSF011A09+ ACTGTGAAAGAGACATCCGTTTTGAACTTCTAGCCCGTCTTTGTCCCAACTCTACCGGAG
rJMSF009B23+ ACTGTGAAAGAGACATCCGTTTTGAACTTCTAGCCCGTCTTTGTCCCAACTCTACCGGAG
JMFN017P18- ACTGTGAAAGAGACATCCGTTTTGAACTTCTAGCCCGTCTTTGTCCCAACTCTACCGGAG
rJMFF018K20+ ACTGTGAAAGAGACATCCGTTTTGAACTTCTAGCCCGTCTTTGTCCCAACTCTACCGGAG
rJMFF011A13+ ACTGTGAAAGAGACATCCGTTTTGAACTTCTAGCCCGTCTTTGTCCCAACTCTACCGGAG
rJMFF042L18+ ACTGTGAAAGAGACATCCGTTTTGAACTTCTAGCCCGTCTTTGTCCCAACTCTACCGGAG
____________________________________________________________
consensus ACTGTGAAAGAGACATCCGTTTTGAACTTCTAGCCCGTCTTTGTCCCAACTCTACCGGAG
. : . : . : . : . : . :
rJMFF005M09+ CTGACATAAGAAGTGTTTGCACCGAGGCTGGAATGTACGCAATTCGAGCACGAAGAAAGA
rJMSF011A09+ CTGACATAAGAAGTGTTTGCACCGAGGCTGGAATGTACGCAATTCGAGCACGAAGAAAGA
rJMSF009B23+ CTGACATAAGAAGTGTTTGCACCGAGGCTGGAATGTACGCAATTCGAGCACGAAGAAAGA
JMFN017P18- CTGACATAAGAAGTGTTTGCACCGAGGCTGGAATGTACGCAATTCGAGCACGAAGAAAGA
rJMFF018K20+ CTGACATAAGAAGTGTTTGCACCGAGGCTGGAATGTACGCAATTCGAGCACGAAGAAAGA
rJMFF011A13+ CTGACATAAGAAGTGTTTGCACCGAGGCTGGAATGTACGCAATTCGAGCACGAAGAAAGA
rJMFF042L18+ CTGACATAAGAATTGTTTGCACCGAGGCTGGAATGTACGCAATTCGAGCACGAAGAAAGA
____________________________________________________________
consensus CTGACATAAGAAGTGTTTGCACCGAGGCTGGAATGTACGCAATTCGAGCACGAAGAAAGA
. : . : . : . : . : . :
rJMFF005M09+ CTGTTACAGAGAAGGACTTTCTAGATGCCGTCAACAAAGTCATCAAAGGGTACCAGAAAT
rJMSF011A09+ CTGTTACAGAGAAGGACTTTCTAGATGCCGTCAACAAAGTCATCAAAGGGTACCAGAAAT
rJMSF009B23+ CTGTTACAGAGAAGGACTTTCTAGATGCCGTCAACAAAGTCATCAAAGGGTACCAGAAAT
JMFN017P18- CTGTTACAGAGAAGGACTTTCTAGATGCCGTCAACAAAGTCATCAAAGGGTACCAGAAAT
rJMFF018K20+ CTGTTACAGAGAAGGACTTTCTAGATGCCGTCAACAAAGTCATCAAAGGGTACCAGAAAT
rJMFF011A13+ CTGTTACAGAGAAGGACTTTCTAGATGCCGTCAACAAAGTCATCAAAGGGTACCAGAAAT
rJMFF022C14+ CCGTCAACAAAGTCATCAAAGGGTNCCNGAAAT
rJMFF042L18+ CTGTTACAGAGAAGGACTTTCTAGATGCCGTCAACAAAGTCATCAAAGGGTACCAGAAAT
____________________________________________________________
consensus CTGTTACAGAGAAGGACTTTCTAGATGCCGTCAACAAAGTCATCAAAGGGTACCAGAAAT
. : . : . : . : . : . :
rJMFF005M09+ TCAGTGCCACTCCAAAATACATGGTCTACAATTGATCCTTCCTGCTGGTTTTTGTCACTT
rJMSF011A09+ TCAGTGCCACTCCAAAATACATGGTCTACAATTGATCCTTCCTGCTGGTTTTTGTCACTT
rJMSF009B23+ TTAGTGCCACTCCAAAATACATGGTCTACAATTGATCCTTCCTGCTGGTTTTTGTCACTT
JMFN017P18- TCAGTGCCACTCCAAAATACATGGTCTACAATTGATCCTTCCTGCTGGTTTTTGTCACTT
rJMFF018K20+ TCAGTGCCACTCCAAAATACATGGTCTACAATTGATCCTTCCTGCTGGTTTTTGTCACTT
rJMFF011A13+ TCAGTGCCACTCCAAAATACATGGTCTACAATTGATCCTTCCTGCTGGTTTTTGTCACTT
rJMFF022C14+ TCAGNGCCCCTCCAAAATACATGGTTTNCAATTGATTTTTCCTNCTGGTTTTTGTCCCTT
rJMFF042L18+ TCAGTGCCACTCCAAAATACATGGTCTACAATTGATCCTTCCTGCTGGTTTTTGTCACTT
____________________________________________________________
consensus TCAGTGCCACTCCAAAATACATGGTCTACAATTGATCCTTCCTGCTGGTTTTTGTCACTT
. : . : . : . : . : . :
rJMFF005M09+ CTCATAAAAGAAATGAAGGGTTCTGGTCTGGTTCCAACTTGAAACTTATTAGCTGCATAG
rJMSF011A09+ CTCATAAAAGAAATGAAGGGTTCTGGTCTGGTTCCAACTTGAAACTTATTAGCTGCATAG
rJMSF009B23+ CTCATAAAAGAAATGAAGGGTTCTGGTCTGGTTCCAACTTGAAACTTATTAGCTGCATAG
JMFN017P18- CTCATAAAAGAAATGAAGGGTTCTGGTCTGGTTCCAACTTGAAACTTATTAGCTGCATAG
rJMFF018K20+ CTCATAAAAGAAATGAAGGGTTCTGGTCTGGTTCCAACTTGAAACTTATTAGCTGCATAG
rJMFF011A13+ CTCATAAAAGAAATGAAGGGTTCTGGTCTGGTTCCAACTTGAAACTTATTAGCTGCATAG
rJMFF022C14+ CCCATAAAAGAAA
rJMFF042L18+ CTCATAAAAGAAATGAAGGGTTCTGGTCTGGTTCCAACTTGAAACTTATTAGCTGCATAG
____________________________________________________________
consensus CTCATAAAAGAAATGAAGGGTTCTGGTCTGGTTCCAACTTGAAACTTATTAGCTGCATAG
. : . : . : . : . : . :
rJMFF005M09+ CTGTCCCCAGACTTGTGCCAGTTCCCTCCCATAACAACTTGCAGTTACCTCTGAGTCTAT
rJMSF011A09+ CTGTCCCCAGACTTGTGCCAGTTCCCTCCCATAACAACTTGCAGTTACCTCTGAGTCTAT
rJMSF009B23+ CTGTCCCCAGACTTGTGCCAGTTCCCTCCCATAACAACTTGCAGTTACCTCTGAGTCTAT
JMFN017P18- CTGTCCCCAGACTTGTGCCAGTTCCCTCCCATAACAACTTGCAGTTACCTCTGAGTCTAT
rJMFF018K20+ CTGTCCCCAGACTTGTGCCAGTTCCCTCCCATAACAACTTGCAGTTACCTCTGAGTCTAT
rJMFF011A13+ CTGTCCCCAGACTTGTGCCAGTTCCCTCCCATAACAACTTGCAGTTACCTCTGAGTCTAT
rJMFF042L18+ CTGTCCCCAGACTTGTGCCAGTTCCCTCCCATAACAACTTGCAGTTACCTCTGAGTCTAT
____________________________________________________________
consensus CTGTCCCCAGACTTGTGCCAGTTCCCTCCCATAACAACTTGCAGTTACCTCTGAGTCTAT
. : . : . : . : . : . :
rJMFF005M09+ CTGTTTCTGCAGTTTTTATATTCAGAAGCTCCATGTGTGAAGTCTCAACATTTCTTAA
rJMSF011A09+ CTGTTTCTGCAGTTTTTATATTCAGAAGCTCCATGTGTGAAGTCTCAAC
rJMSF009B23+ CTGTTTCTGCAGTTTTTATATTCAGAAGCTCCATGTGTGAAGTCTCAACATT
JMFN017P18- CTGTTTCTGCAGTTNTTATATTCAGAA
rJMFF018K20+ CTGTTTCTGCAGTTTTTATATTCAGAAGCTCCATGTGTGAAGTCTCAACATTTCTTAACT
rJMFF011A13+ CTGTTTCTGCAGTTTTTATATTCAGAAGCTCCATGTGTGAAGTCTCAACATTTCTTAACT
rJMFF042L18+ CTGTTTCTGCAGTTTTTATATTCAGAAGCTCCATGTGTGAAGTCTCAACATTTCTTAACT
____________________________________________________________
consensus CTGTTTCTGCAGTTTTTATATTCAGAAGCTCCATGTGTGAAGTCTCAACATTTCTTAACT
. : . : . : . : . : . :
rJMFF018K20+ TTTCTTGAATTCAT
rJMFF011A13+ TTTCTTGAATTCATTGGATCTTCATTTTAAGACATGCTTATCAAGTTT
rJMFF042L18+ TTTCTTGAATTCA-TGGATCTTCATTTTAAGACATGCTTATCAAGTTTATAAATTTATAG
____________________________________________________________
consensus TTTCTTGAATTCATTGGATCTTCATTTTAAGACATGCTTATCAAGTTTATAAATTTATAG