Contig 004099:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011D23Sequence506003108 (2)emb|CDP00973.1|1e-41unnamed protein product [Coffea canephora]610004099 (2)ref|XP_009764826.1|5e-34PREDICTED: receptor-like protein kinase HSL1 [Nicotiana sylvestris]
JMFF042L06Sequence639003108 (2)emb|CDP00973.1|1e-61unnamed protein product [Coffea canephora]640004099 (2)ref|XP_009764826.1|1e-30PREDICTED: receptor-like protein kinase HSL1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF011D23+                 ATGGAGCTAATAACAGGGAAGAAGCCGGTGGAAGCCGAATTCGGGGAGAACAA
rJMFF042L06+                              CAGGGAAGAAGCCGGTGGAAGCCGAATTCGGGGAGAACAA
                      ____________________________________________________________
consensus                    ATGGAGCTAATAACAGGGAAGAAGCCGGTGGAAGCCGAATTCGGGGAGAACAA
 
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rJMFF011D23+          GAACATTGTGTATTGGGTTTCAAGCAAGGTGGAAACCAAGGAAGCGGCATACAAGTTGTT
rJMFF042L06+          GAACATTGTGTATTGGGTTTCAAGCAAGGTGGAAACCAAGGAAGCGGCATACAAGTTGTT
                      ____________________________________________________________
consensus             GAACATTGTGTATTGGGTTTCAAGCAAGGTGGAAACCAAGGAAGCGGCATACAAGTTGTT
 
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rJMFF011D23+          GGATAAACGGGTGTCGGAGTCATTCAAGGGACACATGATTCAGGCGCTCCGTATTGCCAT
rJMFF042L06+          GGATAAACGGGTGTCGGAGTCATTCAAGGGACACATGATTCAGGCGCTCCGTATTGCCAT
                      ____________________________________________________________
consensus             GGATAAACGGGTGTCGGAGTCATTCAAGGGACACATGATTCAGGCGCTCCGTATTGCCAT
 
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rJMFF011D23+          CCGTTGCACTTGTAGAACCCCCGCCTTACGCCCCACCATGAACGAGGTCGCCCAATATCT
rJMFF042L06+          CCGTTGCACTTGTAGAACCCCCGCCTTACGCCCCACCATGAACGAGGTCGCCCAATATCT
                      ____________________________________________________________
consensus             CCGTTGCACTTGTAGAACCCCCGCCTTACGCCCCACCATGAACGAGGTCGCCCAATATCT
 
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rJMFF011D23+          CGTGGAGGCACAATGTTGAGTATGTCAAAACATGAGTGAGCCCATGGATGTGTCTTTCAG
rJMFF042L06+          CGTGGAGGCACAATGTTGAGTATGTCAAAACATGAGTGAGCCCATGGATGTGTCTTTCAG
                      ____________________________________________________________
consensus             CGTGGAGGCACAATGTTGAGTATGTCAAAACATGAGTGAGCCCATGGATGTGTCTTTCAG
 
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rJMFF011D23+          TTGAGAGTGATGCGAATTGAAATGTCACGTAACACTACTGTGGAAGAAGCTAAGCAAGTT
rJMFF042L06+          TTGAGAGTGATGCGAATTGAAATGTCACGTAACACTACTGTGGAAGAAGCTAAGCAAGTT
                      ____________________________________________________________
consensus             TTGAGAGTGATGCGAATTGAAATGTCACGTAACACTACTGTGGAAGAAGCTAAGCAAGTT
 
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rJMFF011D23+          GAAGAAATGCCAGAGAGCATCGATCCATTATATGTGGAATGTCAGAGATTTGGCCTATAT
rJMFF042L06+          GAAGAAATGCCAGAGAGCATCGATCCATTATATGTGGAATGTCAGAGATTTGGCCTATAT
                      ____________________________________________________________
consensus             GAAGAAATGCCAGAGAGCATCGATCCATTATATGTGGAATGTCAGAGATTTGGCCTATAT
 
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rJMFF011D23+          ATATATTTGTGACTACTACTCATAGGTAGCATAACAGAACAGTAACCTCTGATCTTTAAT
rJMFF042L06+          ATATATTTGTGACTACTACTCATAGGTAGCATAACAGAACAGTAACCTCTGATCTTTAAT
                      ____________________________________________________________
consensus             ATATATTTGTGACTACTACTCATAGGTAGCATAACAGAACAGTAACCTCTGATCTTTAAT
 
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rJMFF011D23+          TTGCTTTTTCAAAACCATCATATCATTTGTAGTATAAAGTTGTGTTTCACTTTTGCTTTC
rJMFF042L06+          TTGCTTTTTCAAAACCATCATATCATTTGTAGTATAAAGTTGTGTTTCACTTTTGCTTTC
                      ____________________________________________________________
consensus             TTGCTTTTTCAAAACCATCATATCATTTGTAGTATAAAGTTGTGTTTCACTTTTGCTTTC
 
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rJMFF011D23+          CCTTTTCTTCACTAGTTGAGACTTTGTCAATGTATCCACTGTGCATATATGGCATCTACA
rJMFF042L06+          CCTTTTCTTCACTAGTTGAGACTTTGTCAATGTATCCACTGTGCATATATGGCATCTACA
                      ____________________________________________________________
consensus             CCTTTTCTTCACTAGTTGAGACTTTGTCAATGTATCCACTGTGCATATATGGCATCTACA
 
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rJMFF011D23+          TTTTGTAAAT                                                  
rJMFF042L06+          TTTTGTAAATTGTAATAAAACTTTTCAAGTTTAACGAAAAAAAAAAAAAAACTCTCCAGG
                      ____________________________________________________________
consensus             TTTTGTAAATTGTAATAAAACTTTTCAAGTTTAACGAAAAAAAAAAAAAAACTCTCCAGG