Contig 004098:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF036M13-            AGTCACAAGCACAACATCAGTGGTTTTTTGGCACCATGGGAGAGGTAGATCCAGCTTTC
JMFF042K17-            AGTCACAAGCACAACATCAGTGGTTTTTTGGCACCATGGGAGAGGTAGATCCAGCTTTC
                      ____________________________________________________________
consensus              AGTCACAAGCACAACATCAGTGGTTTTTTGGCACCATGGGAGAGGTAGATCCAGCTTTC
 
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JMFF036M13-           ATCCAAGACGTTGAGCACAGGCCTAAACTCACCAACACTGAACCAGAAGGAATTCCCATT
JMFF042K17-           ATCCAAGACGTTGAGCACAGGCCTAAACTCACCAACACTGAACCAGAAGGAATTCCCATT
                      ____________________________________________________________
consensus             ATCCAAGACGTTGAGCACAGGCCTAAACTCACCAACACTGAACCAGAAGGAATTCCCATT
 
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JMFF036M13-           ATCGACCTTTCGATACTGAGCTCCCCGGAGGCGGACTCCGATGAGTTTCGGCGGCTGGTG
JMFF042K17-           ATCGACCTTTCGATACTGAGCTCCCCGGAGGCGGACTCCGATGAGTTTCGGCGGCTGGTG
                      ____________________________________________________________
consensus             ATCGACCTTTCGATACTGAGCTCCCCGGAGGCGGACTCCGATGAGTTTCGGCGGCTGGTG
 
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JMFF036M13-           GCGGAGATCGGTGATGCAAGCGAGAAGTGGGGATTTTTCCAGGTGATCAACCACGGCGTG
JMFF042K17-           GCGGAGATCGGTGATGCAAGCGAGAAGTGGGGATTTTTCCAGGTGATCAACCACGGCGTG
                      ____________________________________________________________
consensus             GCGGAGATCGGTGATGCAAGCGAGAAGTGGGGATTTTTCCAGGTGATCAACCACGGCGTG
 
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JMFF036M13-           CCGTCAGAACCGCGGCAGAAGATTGAGCTGGCATCGAGGCAGTTCTTTGCGTTACCGAAA
JMFF042K17-           CCGTCAGAACCGCGGCAGAAGATTGAGCTGGCATCGAGGCAGTTCTTTGCGTTACCGAAA
                      ____________________________________________________________
consensus             CCGTCAGAACCGCGGCAGAAGATTGAGCTGGCATCGAGGCAGTTCTTTGCGTTACCGAAA
 
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JMFF036M13-           GAGGAGAAAAGTAAGGTGAGGAGGGATGAAGTAAACCCGTACGGTTATTATGATACAGAA
JMFF042K17-           GAGGAGAAAAGTAAGGTGAGGAGGGATGAAGTAAACCCGTACGGTTATTATGATACAGAA
                      ____________________________________________________________
consensus             GAGGAGAAAAGTAAGGTGAGGAGGGATGAAGTAAACCCGTACGGTTATTATGATACAGAA
 
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JMFF036M13-           CATACCAAGAATGTCAGGGATTGGAAAGAAGTATTTGATTTTTCTGTAGATAGAACTTTC
JMFF042K17-           CATACCAAGAATGTCAGGGATTGGAAAGAAGTATTTGATTTTTCTGTAGATAGAACTTTC
                      ____________________________________________________________
consensus             CATACCAAGAATGTCAGGGATTGGAAAGAAGTATTTGATTTTTCTGTAGATAGAACTTTC
 
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JMFF036M13-           ATTCCGGTTTCTCCTGAGCCCGATGACGAGGCTCTCAAGGAGATGATTAGCCAGTGGCCT
JMFF042K17-           ATTCCGGTTTCTCCTGAGCCCGATGACGAGGCTCTCAAGGAGATGATTAGCCAGTGGCCT
                      ____________________________________________________________
consensus             ATTCCGGTTTCTCCTGAGCCCGATGACGAGGCTCTCAAGGAGATGATTAGCCAGTGGCCT
 
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JMFF036M13-           GAGTACCCTCCAGAAATGAGGGAGGTATGTGAAGAGTATGTTCACGAAGTGCAAAAGCTT
JMFF042K17-           GAGTACCCTCCAGAAATGAGGGAGGTATGTGAAGAGTATGTTCACGAAGTGCAAAAGCTT
rJMFF036M13+                    CAGAAATGAGGGAGGTATGTGAAGAGTATGTTCACGAAGTGCAAAAGCTT
                      ____________________________________________________________
consensus             GAGTACCCTCCAGAAATGAGGGAGGTATGTGAAGAGTATGTTCACGAAGTGCAAAAGCTT
 
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JMFF036M13-           TCTTACAAGCTATTGGAACTCATCTCCCTAAG                            
JMFF042K17-           TCTTACAAGCTATTGGAACTCATCTCCCTAAGCTTAGGGTTGCCGGAGAAGCGATTGAAT
rJMFF036M13+          TCTTACAAGCTATTGGAACTCATCTCCNTAAGCTTAGGGTTGCCGGAGAAGCGATTGAAT
                      ____________________________________________________________
consensus             TCTTACAAGCTATTGGAACTCATCTCCCTAAGCTTAGGGTTGCCGGAGAAGCGATTGAAT
 
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JMFF042K17-           GGATTCTTTAAGGACCAAACCAGTTTTTTGAGGCTAAATCACTACCCACCATGCCCT   
rJMFF036M13+          GGATTCTTTAAGGACCAAACCAGTTTTTTGAGGCTAAATCACTACCCACCATGCCCTAGC
rJMFF042K17+                                                  ACTACCCACCATGCCCTAGC
                      ____________________________________________________________
consensus             GGATTCTTTAAGGACCAAACCAGTTTTTTGAGGCTAAATCACTACCCACCATGCCCTAGC
 
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rJMFF036M13+          CCTCATCTGGCTCTTGGAGTAGGGAGACACAAGGATGCTGGGGCTTTGACCATTCTGGCT
rJMFF042K17+          CCTCATCTGGCTCTTGGAGTAGGGAGACACAAGGATGCTGGGGCTTTGACCATTCTGGCT
                      ____________________________________________________________
consensus             CCTCATCTGGCTCTTGGAGTAGGGAGACACAAGGATGCTGGGGCTTTGACCATTCTGGCT
 
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rJMFF036M13+          CAGGATGATGTTGGAGGGCTTGAAGTGAAAAGGAAAACAGATGGAGAATGGGTTTTTGTC
rJMFF042K17+          CAGGATGATGTTGGAGGGCTTGAAGTGAAAAGGAAAACAGATGGAGAATGGGTTTTTGTC
                      ____________________________________________________________
consensus             CAGGATGATGTTGGAGGGCTTGAAGTGAAAAGGAAAACAGATGGAGAATGGGTTTTTGTC
 
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rJMFF036M13+          AAGCCTACACCAGATGCTTATATCATAAATGTTGGTGACATTATTCAGGTTTGGAGCAAT
rJMFF042K17+          AAGCCTACACCAGATGCTTATATCATAAATGTTGGTGACATTATTCAGGTTTGGAGCAAT
                      ____________________________________________________________
consensus             AAGCCTACACCAGATGCTTATATCATAAATGTTGGTGACATTATTCAGGTTTGGAGCAAT
 
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rJMFF036M13+          GACAAGTATGAGAGTGTGGAACACAGGGTTAAGGTGAACTCGGAGAGGGAACGGTTTTCA
rJMFF042K17+          GACAAGTATGAGAGTGTGGAACACAGGGTTAAGGTGAACTCGGAGAGGGAACGGTTTTCA
                      ____________________________________________________________
consensus             GACAAGTATGAGAGTGTGGAACACAGGGTTAAGGTGAACTCGGAGAGGGAACGGTTTTCA
 
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rJMFF036M13+          ATTCCGTTCTTCGTTAACCCTGCACACTACACTTGGGTGCAGCCCCTGGATGAGATAGTG
rJMFF031O24+                                              GTGCAGCCCCTGNATGAGATAGTG
rJMFF042K17+          ATTCCGTTCTTCGTTAACCCTGCACACTACACTTGGGTGCAGCCCCTGGATGAGATAGTG
                      ____________________________________________________________
consensus             ATTCCGTTCTTCGTTAACCCTGCACACTACACTTGGGTGCAGCCCCTGGATGAGATAGTG
 
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rJMFF036M13+          A-ACGAGGAAAATCCAGCAAAGTACAAGCCATATAACTGGGGAAAGTTTTTCACTGCTCG
rJMFF031O24+          ACACGANGAAAATCCAGCAAAGTACAAGCCATATCACTGGGGAAAGTTCTTCANTGCTNG
rJMFF042K17+          A-ACGAGGAAAATCCAGCAAAGTACAAGCCATATAACTGGGGAAAGTTTTTCACTGCTCG
                      ____________________________________________________________
consensus             A-ACGAGGAAAATCCAGCAAAGTACAAGCCATATAACTGGGGAAAGTTTTTCACTGCTCG
 
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rJMFF036M13+          AAAGACCAGTAATTACAAGAAGCTTGGTGTTGAAAACATTCAAATTTACCATTTCAAAAA
rJMFF031O24+          AAAGACCAGTAATTACAAGAAGNTNGGTGTTGAAAACATTCAAATTTACCATTTCAAAAA
rJMFF042K17+          AAAGACCAGTAATTACAAGAAGCTTGGTGTTGAAAACATTCAAATTTACCATTTCAAAAA
                      ____________________________________________________________
consensus             AAAGACCAGTAATTACAAGAAGCTTGGTGTTGAAAACATTCAAATTTACCATTTCAAAAA
 
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rJMFF036M13+          TACCAAGAGTTCTGATCAGTAGCCTACCTTATCTATAAGCTCCACATTTCTGCTATAGCC
rJMFF031O24+          TACCAAGAGTTCTGATCAGTAGCCTACCTTATCTATAAGCTCCACATTT           
rJMFF042K17+          TACCAAGAGTTCTGATCAGTAGCCTACCTTATCTATAAGCTCCACATTTCTGCTATAGCC
                      ____________________________________________________________
consensus             TACCAAGAGTTCTGATCAGTAGCCTACCTTATCTATAAGCTCCACATTTCTGCTATAGCC
 
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rJMFF036M13+          TCTTGAAAGACTTGATTATGTAGCATGTTGCAAGTATTATATATAAGAAACCAGTATGTA
rJMFF042K17+          TCTTGAAAGACTTGATTATGTAGCATGTTGCAAGTATTATATATAAGAAACCAGTATGTA
                      ____________________________________________________________
consensus             TCTTGAAAGACTTGATTATGTAGCATGTTGCAAGTATTATATATAAGAAACCAGTATGTA
 
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rJMFF036M13+          ACCTGAATTTATTGGTGTACATGAATAAGAACC                           
rJMFF042K17+          ACCTGAATTTATTGGTGTACATGAATAAGAACCAGTATGTAATCTGGACTTTACTTTTGT
                      ____________________________________________________________
consensus             ACCTGAATTTATTGGTGTACATGAATAAGAACCAGTATGTAATCTGGACTTTACTTTTGT