Contig 004096:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS039A12-                                                       GAGAGAGAACTAGGAT
                      ____________________________________________________________
consensus                                                         GAGAGAGAACTAGGAT
 
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JMFS039A12-           GAAATCGGCCGGGTTCGAACCGGTTCATCTCGGTTCAAACGCCTACAAGCAGGCGAGTAT
                      ____________________________________________________________
consensus             GAAATCGGCCGGGTTCGAACCGGTTCATCTCGGTTCAAACGCCTACAAGCAGGCGAGTAT
 
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JMFS039A12-           GCTCCTGGCGCTGTTCGCCGGCGGTGACGGCTATAGAGTGGAGGAGAACGACGGGTGTCT
                      ____________________________________________________________
consensus             GCTCCTGGCGCTGTTCGCCGGCGGTGACGGCTATAGAGTGGAGGAGAACGACGGGTGTCT
 
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JMFS039A12-           CATGCTAGGGTGGCACACCAGGTCGCTCATTGCCACGTCGGCCTGGCAGCTCAACGGCGG
                      ____________________________________________________________
consensus             CATGCTAGGGTGGCACACCAGGTCGCTCATTGCCACGTCGGCCTGGCAGCTCAACGGCGG
 
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JMFS039A12-           CGGCGGCGGCGATCCGTAGCGAGTCAACTCGTGAACAACGCATGAGTCAGCTCGGAGAAC
                      ____________________________________________________________
consensus             CGGCGGCGGCGATCCGTAGCGAGTCAACTCGTGAACAACGCATGAGTCAGCTCGGAGAAC
 
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JMFS039A12-           TCGGCACCCCGGTGACGGTAGTGATGTGCTGAGTTGGTTGGTTTGGTGGAAGTGAGAGAC
                      ____________________________________________________________
consensus             TCGGCACCCCGGTGACGGTAGTGATGTGCTGAGTTGGTTGGTTTGGTGGAAGTGAGAGAC
 
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JMFS039A12-           AGAGAAAGGGACGGACCAAAAATGAGTCAAATCCTGTCTTTTTACTTTTTTTTTTTTTTT
                      ____________________________________________________________
consensus             AGAGAAAGGGACGGACCAAAAATGAGTCAAATCCTGTCTTTTTACTTTTTTTTTTTTTTT
 
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JMFS039A12-           TACTTCAATCTAAAAGTCATCCTTTTTAGAATTTCTTTGGXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus             TACTTCAATCTAAAAGTCATCCTTTTTAGAATTTCTTTGGNNNNNNNNNNNNNNNNNNNN
 
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JMFS039A12-           XXXACCCTTTTGAAGGAGTGGTTTGATTTGGGTCGTTTACCTTATTTGGCTTAGGATTTC
rJMFF041O14+             ACCCCTTTGAAGGAGTGGTTTGATTTGGGTCGTTTACCTTATTTGGGTTAGGATTTC
                      ____________________________________________________________
consensus             NNNACCCTTTTGAAGGAGTGGTTTGATTTGGGTCGTTTACCTTATTTGGGTTAGGATTTC
 
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JMFS039A12-           TCCCTTTTGCTCTCCTGCCTAAGTGTGCTATAATCTCAACTTAAAAAGAAAAAAATAATA
rJMFF041O14+          TCCCTTTTGCTCTCCTGCCTAAGTGTGCTATAATCTCACCTTAAAAAGAAAAAAATAATA
                      ____________________________________________________________
consensus             TCCCTTTTGCTCTCCTGCCTAAGTGTGCTATAATCTCACCTTAAAAAGAAAAAAATAATA
 
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JMFS039A12-           AT                                                          
rJMFF041O14+          ATTATTTATGATTCAATGGCATGGAGAGTAAGTTAATAGGAGAACGTTTATGTTTGCTGT
                      ____________________________________________________________
consensus             ATTATTTATGATTCAATGGCATGGAGAGTAAGTTAATAGGAGAACGTTTATGTTTGCTGT
 
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rJMFF041O14+          GAAGTCAATAAAAACATGTAATGTATGGCCAATCCCTCTTTTTATTAATTTCTAGCTTTT
                      ____________________________________________________________
consensus             GAAGTCAATAAAAACATGTAATGTATGGCCAATCCCTCTTTTTATTAATTTCTAGCTTTT