| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005D02 | Sequence | 176 | 004667 (12) | 713 | 004095 (11) | ref|XP_010548093.1| | 4e-108 | PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [ | |||
| JMFF014C11 | Sequence | 201 | 004667 (12) | 685 | 004095 (11) | ref|XP_010548093.1| | 2e-108 | PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [ | |||
| JMFF029A17 | Sequence | 491 | 004667 (12) | gb|EYU22457.1| | 4e-49 | hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata] | 653 | 004095 (11) | gb|ADV02785.1| | 4e-89 | pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas] |
| JMFF029I14 | Sequence | 359 | 004667 (12) | gb|EYU22457.1| | 4e-19 | hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata] | 693 | 004095 (11) | ref|XP_010548093.1| | 2e-110 | PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [ |
| JMFF035D04 | Sequence | 387 | 004667 (12) | gb|EYU22457.1| | 1e-25 | hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata] | 690 | 004095 (11) | ref|XP_010548093.1| | 2e-110 | PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [ |
| JMFF041C17 | Sequence | 462 | 004667 (12) | ref|XP_010255436.1| | 1e-42 | PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-lik | 557 | 004095 (11) | gb|ADV02785.1| | 2e-59 | pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas] |
| JMFF041N15 | Sequence | 642 | 004667 (12) | gb|EYU22457.1| | 7e-86 | hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata] | 633 | 004095 (11) | gb|ADV02785.1| | 3e-75 | pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas] |
| JMFF044E17 | Sequence | 621 | 004667 (12) | gb|EYU22457.1| | 2e-80 | hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata] | 615 | 004095 (11) | gb|ADV02785.1| | 9e-72 | pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas] |
| JMFF048N12 | Sequence | 501 | 004667 (12) | gb|EYU22457.1| | 1e-47 | hypothetical protein MIMGU_mgv1a007945mg [Erythranthe guttata] | 438 | 004095 (11) | gb|ADV02785.1| | 1e-43 | pyruvate dehydrogenase E1 alpha subunit, partial [Ipomoea batatas] |
| JMFN044A08 | Sequence | 639 | 004095 (11) | ref|XP_010548093.1| | 1e-106 | PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [ | |||||
| JMSF051K18 | Sequence | 682 | 004667 (12) | sp|P52903.1|ODPA_SOLTU | 8e-99 | RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; | 719 | 004095 (11) | ref|XP_010548093.1| | 3e-109 | PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [ |
This contig is upended
. : . : . : . : . : . :
rJMFF029I14+ TTGCGAGAACAATCACTATGGAATGGGGACTGCAGAATGGAGGGCAGCAAAAAGTC
rJMFF014C11+ TTGCGAGANCAATCACTATGGAATGGGGACTGCAGAATGGAGGGCAGCAAAAAGTC
JMFN044A08- ACAATCACTATGGAATGGGGACTGCAGAATGGAGGGCAGCAAAAAGTC
rJMFF035D04+ TTGCGAGAACAATCACTATGGAATGGGGACTGCAGAATGGAGGGCAGCAAAAAGTC
rJMSF051K18+ TGGTTTGCGAGAACAATCACTATGGAATNGGGACTGCAGAATGGAGGGCAGCAAAAAGTC
rJMFF005D02+ GCGAGAACAATCACTATGGAATGGGGACTGCAGAATGGAGGGCAGCAAAAAGTC
____________________________________________________________
consensus TGGTTTGCGAGAACAATCACTATGGAATGGGGACTGCAGAATGGAGGGCAGCAAAAAGTC
. : . : . : . : . : . :
rJMFF029I14+ CTGCCTATTATAAGAGAGGAGATTATGTCCCCGGTCTTAAGGTGGATGGTATGGATGTCC
rJMFF014C11+ CTGCCTATTATAAGAGAGGAGATTATGTCCCCGGTCTTAAGGTGGATGGTATGGATGTCC
JMFN044A08- CTGCCTATTATAAGAGAGGAGATTATGTCCCCGGTCTTAAGGTGGATGGTATGGATGTCC
rJMFF035D04+ CTGCCTATTATAAGAGAGGAGATTATGTCCCCGGTCTTAAGGTGGATGGTATGGATGTCC
rJMSF051K18+ CTGCCTATTATAAGAGAGGAGATTATGTCCCCGGTCTTAAGGTGGATGGTATGGATGTCC
rJMFF005D02+ CTGCCTATTATAAGAGAGGAGATTATGTCCCCGGTCTTAAGGTGGATGGTATGGATGTCC
rJMFF029A17+ CTTAAGGTGGATGGTATGGATGTCC
____________________________________________________________
consensus CTGCCTATTATAAGAGAGGAGATTATGTCCCCGGTCTTAAGGTGGATGGTATGGATGTCC
. : . : . : . : . : . :
rJMFF029I14+ TCGCTGTGAAACAGGCATGCAAATTCGCCAAGGACCATGCTCTGAAGAATGGACCAATTA
rJMFF014C11+ TCGCTGTGAAACAGGCATGCAAATTCGCCAAGGACCATGCTCTGAAGAATGGACCAATTA
JMFN044A08- TCGCTGTGAAACAGGCATGCAAATTCGCCAAGGACCATGCTCTGAAGAATGGACCAATTA
rJMFF035D04+ TCGCTGTGAAACAGGCATGCAAATTCGCCAAGGACCATGCTCTGAAGAATGGACCAATTA
rJMSF051K18+ TCGCTGTGAAACAGGCATGCAAATTCGCCAAGGACCATGCTCTGAAGAATGGACCAATTA
rJMFF005D02+ TCGCTGTGAAACAGGCATGCAAATTCGCCAAGGACCATGCTCTGAAGAATGGACCAATTA
rJMFF029A17+ TCGCTGTGAAACAGGCATGCAAATTCGCCAAGGACCATGCTCTGAAGAATGGACCAATTA
rJMFF044E17+ GAAGAATGGACCAATTA
rJMFF041N15+ CCAAGGACCATGCTCTGAAGAATGGACCAATTA
____________________________________________________________
consensus TCGCTGTGAAACAGGCATGCAAATTCGCCAAGGACCATGCTCTGAAGAATGGACCAATTA
. : . : . : . : . : . :
rJMFF029I14+ TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
rJMFF014C11+ TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
JMFN044A08- TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
rJMFF035D04+ TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
rJMSF051K18+ TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
rJMFF005D02+ TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
rJMFF029A17+ TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
rJMFF044E17+ TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
rJMFF041C17+ CATGGCCACTCCATGTCTGATCCTGGAAGCACTT
rJMFF041N15+ TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
____________________________________________________________
consensus TTCTTGAAATGGACACCTATAGGTACCATGGCCACTCCATGTCTGATCCTGGAAGCACTT
. : . : . : . : . : . :
rJMFF029I14+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMFF014C11+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
JMFN044A08- ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMFF035D04+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMSF051K18+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMFF005D02+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMFF048N12+ AGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMFF029A17+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMFF044E17+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMFF041C17+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
rJMFF041N15+ ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
____________________________________________________________
consensus ATCGCACACGTGATGAGATCAGTGGAGTGAGACAGGAGCGTGATCCAATTGAAAGAGTCA
. : . : . : . : . : . :
rJMFF029I14+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMFF014C11+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
JMFN044A08- GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMFF035D04+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMSF051K18+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMFF005D02+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMFF048N12+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMFF029A17+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMFF044E17+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMFF041C17+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
rJMFF041N15+ GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
____________________________________________________________
consensus GAAAGCTAATATTAAGTCATGATATATCCACTGAGAAAGAGCTGAAGGATATCGAGAAGG
. : . : . : . : . : . :
rJMFF029I14+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMFF014C11+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
JMFN044A08- AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMFF035D04+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMSF051K18+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMFF005D02+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMFF048N12+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMFF029A17+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMFF044E17+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMFF041C17+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
rJMFF041N15+ AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
____________________________________________________________
consensus AGGTGAGGAAAGAGGTAGATGAAGCCATAACAAAGGCAAAGGAGTGCCCCATGCCTGACC
. : . : . : . : . : . :
rJMFF029I14+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMFF014C11+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
JMFN044A08- CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMFF035D04+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMSF051K18+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMFF005D02+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMFF048N12+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMFF029A17+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMFF044E17+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMFF041C17+ CTTATGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
rJMFF041N15+ CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGTTTGGAACTGAGGCTTTTGGAGCAG
____________________________________________________________
consensus CTTCTGAACTCTTTTCAAATGTATATGTGAAAGGGCTTGGAACTGAGGCTTTTGGAGCAG
. : . : . : . : . : . :
rJMFF029I14+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMFF014C11+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
JMFN044A08- ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMFF035D04+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMSF051K18+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMFF005D02+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMFF048N12+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMFF029A17+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMFF044E17+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMFF041C17+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
rJMFF041N15+ ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
____________________________________________________________
consensus ACAGGAAGGAATTGAGAGCAATTCTTCCATGAGCCGAAGTGTTTGACAACAGTTGGTCTC
. : . : . : . : . : . :
rJMFF029I14+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMFF014C11+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
JMFN044A08- TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMFF035D04+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMSF051K18+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMFF005D02+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMFF048N12+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMFF029A17+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMFF044E17+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMFF041C17+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
rJMFF041N15+ TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
____________________________________________________________
consensus TATCAATATACACAAGAGATGTAGAAAATAACCAACATACTTAAACGTTCAGTTTCTATG
. : . : . : . : . : . :
rJMFF029I14+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
rJMFF014C11+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
JMFN044A08- AATTTCTTCAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAA
rJMFF035D04+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
rJMSF051K18+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
rJMFF005D02+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
rJMFF048N12+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
rJMFF029A17+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
rJMFF044E17+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
rJMFF041C17+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
rJMFF041N15+ ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
____________________________________________________________
consensus ATTTCTTCAAGAGGTTTGATAGTGCAATTTTTTGAGTGATTAAATAATGAATTTGAATAC
. : . : . : . : . : . :
rJMFF029I14+ ACATGCAGAAGCTCTGCATTGAGTAATACTAGGT
rJMFF014C11+ ACATGCAGAAGCTCTGCATTGAGTAATAC
rJMFF035D04+ ACATGCAGAAGCTCTGCATTGAGTAATACTA
rJMSF051K18+ ACATGCAGAAGCTCTGCATTGAGTAATACTAGGTTGAAGATTTTTGCAGTGAGAGCTTA
rJMFF005D02+ ACATGCAGAAGCTCTGCATTGAGTAATACTAGGTTGAAGATTTTTGCAGTGAGAGCTTA
rJMFF048N12+ ACATGCAGAAGCTCTGCATTGAGTAATACTAGGTTGAAGATTTTT
rJMFF029A17+ ACATGCAGAAGCTCTGCATTGAGTAATACTAGGTTGAAGATTTTTGCAGTGAGAGCTTAT
rJMFF044E17+ ACATGCAGAAGCTCTGCATTGAGTAATACTAGGTTGAAGATTTTTGCAGTGAGAGCTTAT
rJMFF041C17+ ACATGCAGAAGCTCTGCATTGAGTAATACTAGGTTGAAGATTTTTGCAGTGAGAGCTTAT
rJMFF041N15+ ACATGCAGAAGCTCTGCATTGAGTAATACTAGGTTGAAGATTTTTGCAGTGAGAGCTTAT
____________________________________________________________
consensus ACATGCAGAAGCTCTGCATTGAGTAATACTAGGTTGAAGATTTTTGCAGTGAGAGCTTAT
. : . : . : . : . : . :
rJMFF029A17+ TGCTCCTACAAGAGCTGTGGTTCAAAGT
rJMFF044E17+ TGCTCCTACAAGAGCTGTGGTTCAAAGTTGTTATTTTTAAACCTTTTGGCATTGTT
rJMFF041C17+ TGCTCCTACAAGAGCTGTGGTTCAAAGTTGATATTTTTAAACC
rJMFF041N15+ TGCTCCTACAAGAGCTGTGGTTCAAAGTTGATATTTTTAAACCTTTTGGCATTGTTTCCG
____________________________________________________________
consensus TGCTCCTACAAGAGCTGTGGTTCAAAGTTGATATTTTTAAACCTTTTGGCATTGTTTCCG